Part of scaffold_333 (Scaffold)

For more information consult the page for scaffold_333 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

ZCCHC5 ENSTTRG00000002715 (Bottlenosed dolphin)

Gene Details

zinc finger, CCHC domain containing 5

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000002546, Bottlenosed dolphin)

Protein Percentage 85.15%
cDNA percentage 86.61%
Ka/Ks Ratio 0.44145 (Ka = 0.0238, Ks = 0.054)

ZCCHC5 ENSBTAG00000008326 (Cow)

Gene Details

Uncharacterized protein

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000010965, Cow)

Protein Percentage 75.37%
cDNA percentage 85.66%
Ka/Ks Ratio 1.0542 (Ka = 0.1718, Ks = 0.1629)

ZCCHC5  (Minke Whale)

Gene Details

zinc finger, CCHC domain containing 5

External Links

Gene match (Identifier: BACU013007, Minke Whale)

Protein Percentage 98.63%
cDNA percentage 99.35%
Ka/Ks Ratio 1.53611 (Ka = 0.0078, Ks = 0.005)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 1542 bp    Location:813100..810670   Strand:-
>bmy_07741
ATGATGGTGGAGGACTTAGCAGCCTCCTATATTGCTCTGAAATTGGAGAATGAAATTCTGCAGGCTCAAGTGCAGCGGCTGATGGAGGAAAATGCTGCCTTGCAGTCCCAGATCCCAGAGCTCCAGAAGCCCCAAGCAGCCAAAGAGAATGAACCACTCCAGAAGCCCTCAGAGGCCCAGGAGACCCAGAGACCCCCAGAGACCCTGGATTTCCCAGCAGCCTTGGAACCCCAAGAGCCCCCAGAGGTCAAGGAGCCCCAGAAGCCCAGAGAGACTCAGGACCTCCCATCCTGGGAGCCCTCAGCAGCCCAGGAGCCCCAAAAATCCTTGGAACCCCCAGCAGATCCAGAGTCCCTGGAGCCCCCAGCAACCCAGGATCCCCAGGCACCTTCAATGGTCCACGAGCTCACAGGAGCCTGGATATCCCATAAGCCCTCAGAGGCCAAGGAGCCTCAGAAGCTCCCAATGGCCCAGGAGGTCCAGAAGCCCGCAGAATTCAAGGAGGTTCAGGAGCCCCCAGATACCCAGGATGCCCCAGCAGGCCAGGGGACCCAGAATTCAGAGCTCCAGGATCCCCCAAATGCCCAGGAGCTCCAGGAGACACCAAAATGCCAGGACACCTCAACACACCTGGAGTCCCTTGAGTTTCTTGCCCCCCAGGAGCTCCAGGATCCTTCAGATGCCCAGGAGTTCCTAGGACTCTTAACACCCAAGGAGTCCCTGGACGGCCTAACAGCTGCTGAAACATCAGCAGCTTCAGAGTTTCCACAGTCTTCCAATGGGTTAGAGGCTGAAGCTTTCCCTCTAGAATACCCTTTAGCCTTCAATGGGGATGCCCAGAAGCTTCCTGAGTTTCTGGTTCAATTGAATAGTTACATGAGAGTCAGAGGGCACCTGTATCCCACCGAAGCAGCTCTGGTAAGCTTTGTTGGCAACCGCTTCTCAGGTGAAGCAGGAAAGTGGTTCCAGCCCTTAGTAGATATCCAAAGCCCCTTGCTGGAGCAATTTGAAAGTTTCATACAAGTGCTCCAGGATACCTTTGACAATCCAGAAAACATGGAAGATGCCAACCACCGCATCCGTAAGCTCTGCCAAGGGGAGGACCATGTCCACCAGTATGCGACCCACTTCCACATCATTGCTCAAGAGCTAAACTGGGATGAAAGCACTCTCTGCATCCAATTTCAGGAAGGGCTTGCCAGTTCTATCCGAGATGAACTGTCTCGCACAAACCCAGCCACCAACCTATCTGATCTGATCACCCAATGCATCACCCTAGAAGAGAAGTTAAGTGGTAAGCCTGATCTAAGTCCACAAGAGGCAAGTCCCTCTCAGGAGAAAGCTGGGTTTGATAGTCCACCAGATGAAAACCAGCCTGTGCAGGCTTCAAGCAATCGCCCACACCTCAGTGAAGCCGAACGAGCCCGCCGCCGTGAAGGCCACTTGTGCCTCTACTGTGGTTATCCTGGTCATTTCGCCAGAGATTGCCCTGTCAAGCCTCATCGTGCCCAGCAGGCGGGAAACATCGAGGCCCGGCGGTAA

Related Sequences

bmy_07741T0 Protein

Length: 514 aa      View alignments
>bmy_07741T0
MMVEDLAASYIALKLENEILQAQVQRLMEENAALQSQIPELQKPQAAKENEPLQKPSEAQETQRPPETLDFPAALEPQEPPEVKEPQKPRETQDLPSWEPSAAQEPQKSLEPPADPESLEPPATQDPQAPSMVHELTGAWISHKPSEAKEPQKLPMAQEVQKPAEFKEVQEPPDTQDAPAGQGTQNSELQDPPNAQELQETPKCQDTSTHLESLEFLAPQELQDPSDAQEFLGLLTPKESLDGLTAAETSAASEFPQSSNGLEAEAFPLEYPLAFNGDAQKLPEFLVQLNSYMRVRGHLYPTEAALVSFVGNRFSGEAGKWFQPLVDIQSPLLEQFESFIQVLQDTFDNPENMEDANHRIRKLCQGEDHVHQYATHFHIIAQELNWDESTLCIQFQEGLASSIRDELSRTNPATNLSDLITQCITLEEKLSGKPDLSPQEASPSQEKAGFDSPPDENQPVQASSNRPHLSEAERARRREGHLCLYCGYPGHFARDCPVKPHRAQQAGNIEARR*