Sequence details bmy_07745 (Coding sequence)

Part of scaffold_338 (Scaffold)

For more information consult the page for scaffold_338 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

SCN8A ENSTTRG00000013854 (Bottlenosed dolphin)

Gene Details

sodium channel, voltage gated, type VIII, alpha subunit

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000013138, Bottlenosed dolphin)

Protein Percentage 94.33%
cDNA percentage 94.02%
Ka/Ks Ratio 0.16255 (Ka = 0.0148, Ks = 0.0908)

SCN8A ENSBTAG00000021339 (Cow)

Gene Details

sodium channel protein type 8 subunit alpha

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000053165, Cow)

Protein Percentage 97.69%
cDNA percentage 94.68%
Ka/Ks Ratio 0.05727 (Ka = 0.0131, Ks = 0.2282)

SCN8A  (Minke Whale)

Gene Details

sodium channel, voltage gated, type VIII, alpha subunit

External Links

Gene match (Identifier: BACU008039, Minke Whale)

Protein Percentage 97.57%
cDNA percentage 97.64%
Ka/Ks Ratio 0.25007 (Ka = 0.0156, Ks = 0.0622)

Additional orthologs identified in other species via the OPTIC pipeline.

SCN8A (Human)   Scn8a (Mouse)  

Genome Location

Sequence Coding sequence

Length: 4527 bp    Location:65661..8408   Strand:-
Raw sequence 
>bmy_07745
GAATGCAAGGATGGGGCCAGGCTGGGGAAGCTGACAGCCTTTGTTCAGCCTCTACGGGGTCCCCTTCCTGTCTCATGCCTCCCTCTCTGTCTCTCTCTCTTCCTGCCCCTACAGTCACTGCTCAGCATTCCGGGCTCCCCATTCCTGTCCCGCCACAACAGCAAAAGCAGCATCTTCAGCTTCAGGGGGCCCGGGCGGTTCCGGGACCCGGGCTCCGAGAACGAGTTTGCGGACGACGAGCACAGCACGGTGGAGGAGAGCGAGGGCCGCCGGGACTCGCTCTTCATCCCCATCCGAGCCCGCGAGCGCCGCAGCAGCTACAGCGGCTACAGCGGCTACAGCCAGGGCAGCCGCTCCTCGCGCATCTTCCCCAGCCTGCGGCGCAGCGTCAAGCGCAACAGCACGGTGGACTGCAACGGTGTGGTGTCCCTCATCGGCGGCCCCGGCTCCCACATCAGCGGGCGTCTCCTGCCAGAGGTGAAAATAGATAAGGCAGCTACTGATGACAGTGCTACAACCGAGGTGGAAATTAAGAAGAAAGGCCCTGGATCTCTCTTAGTTTCCATGGACCAATTGGCCTCCTATGGGCGGAAGGACAGGATCAACAGTATATTGAGCGTTGTTACAAATACACTGGTAGAAGAGCTGGAAGAGTCTCAGAGAAAGTGCCCGCCGTGCTGGTATAAATTTGCCAACACTTTCCTCATCTGGGAGTGTCACCCCTACTGGATAAAGCTGAAAGAGATTGTAAACTTGATCGTTATGGACCCTTTTGTGGACTTGGCCATCACCATCTGCATTGTCCTGAATACACTGTTTATGGCAATGGAGCACCATCCTATGACGCCACAGTTTGAACATGTCTTGGCTGTAGGAAATCTGGTTTTCACTGGAATTTTCACAGCGGAAATGTTCCTGAAGCTCATAGCCATGGATCCCTACTATTATTTCCAAGAAGGTTGGAACATTTTTGATGGATTTATTGTCTCCCTCAGTTTAATGGAACTGAGTCTAGCAGACGTGGAGGGGCTTTCGGTGCTGCGATCTTTCCGATTGCTCCGAGTCTTCAAACTGGCCAAATCCTGGCCCACCCTGAACATGCTGATCAAGATTATTGGAAATTCAGTGGGTGCCCTGGGCAACCTGACCCTGGTGCTGGCCATTATTGTTTTCATCTTTGCCGTGGTGGGAATGCAACTCTTTGGAAAGAGCTACAAAGAGTGTGTCTGCAAGATCAACCAGGACTGTGAACTCCCTCGCTGGCACATGCATGACTTTTTTCATTCTTTCCTCATTGTCTTTCGAGTGTTGTGCGGGGAGTGGATCGAGACTATGTGGGACTGCATGGAGGTGGCCGGCCAGGCCATGTGCCTCATTGTCTTCATGATGGTCATGGTTATTGGCAACTTGGTGGTGCTGAACCTGTTTCTGGCCTTGCTCCTGAGCTCCTTCAGTGCTGACAACTTGGCAGCCACAGATGATGATGGGGAAATGAACAACCTACAAATCTCAGTAATCCGGATCAAGAAGGGCGTGGCTTGGACCAAACTGAAAGTGCACGCCTTCATGCAGGCCCACTTCAAGCAGCGTGAGGCCGATGAAGTGAAACCTCTGGATGAGCTGTACGAAAAGAAGGCCAACTGTATCGCCAACCACACTGGCGCCGACATCCACCGGAACGGTGACTTCCAGAAGAATGGCAATGGCACAACCAGCGGCATCGGCAGCAGCGTGGAGAAGTACATCATTGATGAGGACCACATGTCCTTCATCAACAATCCCAACCTGACCGTGAGAGTGCCCATCGCGGTAGGCGAGTCTGATTTTGAGAACCTCAACACCGAGGACGTGAGCAGCGAGTCGGATCCTGAAGGCAGCAAAGATAAACTGGATGACACTAGCTCCTCTGAAGGCAGCACCATTGATATCAAACCAGAAGTAGAAGAAGTCCCTGTGGAACAGCCTGAGGAATACTTGGATCCGGATGCCTGTTTCACAGAAGGTTGTGTCCAGAGATTCAAGTGCTGCCAGGTCAACATTGAGGAAGGGCTGGGCAAGTCTTGGTGGATCCTGCGGAAAACCTGCTTTCTCATTGTGGAGCACAATTGGTTTGAGACCTTCATCATCTTCATGATTCTGCTCAGCAGTGGCGCCCTGGCCTTCGAGGACATCTACATTGAGCAGAGAAAGAGCATTCGTACCATCCTGGAGTACGCTGACAAAGTCTTCACCTATATCTTCATCCTGGAGATGTTGCTCAAGTGGATAGCCTATGGCTTCGTCAAGTTCTTCACCAATGCCTGGTGCTGGCTGGACTTCCTCATCGTGGCTGTCTCTTTAGTCAGCCTTATAGCTAATGCCCTGGGCTACTCGGAACTAGGTGCCATAAAGTCCCTTAGGACCCTAAGAGCTTTGAGACCCTTAAGAGCCTTATCACGATTTGAAGGGATGAGGGTGGTGGTGAATGCCTTGGTGGGCGCCATCCCCTCCATCATGAATGTGCTGCTGGTGTGTCTCATCTTCTGGCTGATTTTCAGCATCATGGGAGTTAACCTGTTTGCCGGAAAGTACCACTACTGCTTTAATGAGTCTTCTGAAATCCGATTTGAAATTGAAGATGTCAACAATAAAACTGAGTGTGAAAAGCTCATGGAGGGGAACAATACAGAAATCAGATGGAAGAACGTGAAGATCAACTTTGACAACGTCGGGGCAGGATATCTGGCGCTTCTTCAAGTGGCAACCTTCAAAGGCTGGATGGACATCATGTATGCAGCTGTAGATTCCCGAAAGCCTGATGAGCAGCCTAAGTATGAGGACAACATCTACATGTACATCTACTTTGTCATCTTCATCATCTTCGGCTCCTTCTTCACCCTGAACCTGTTCATTGGTGTCATCATTGATAACTTCAATCAACAAAAGAAAAAGATAGGTCTCCTCTCCACATTGCCCCATGTGAAAGCCAGTTGTAATTGCACGTTCTCTTTTTCCCTCCTTTACTTTGGAGGTCAAGACATCTTCATGACCGAAGAACAGAAGAAGTACTACAATGCCATGAAAAAGCTGGGCTCAAAGAAACCACAGAAACCCATCCCCCGCCCCCTGAACAAAATCCAAGGTATCATCTTTGATCTTGTCACTCAACAAGCCTTTGACATTGTTATCATGATGCTCATCTGCCTGAACATGGTGACAATGATGGTGGAGACAGATACACAGAGCAAGCAGATGGAGAACATTCTCTACTGGATTAACCTGGTCTTTGTCATCTTCTTCACCTGTGAGTGTGTGCTCAAAATGTTTGCCTTGAGGCACTACTACTTCACCATTGGCTGGAACATCTTCGACTTCGTGGTGGTCATCCTCTCCATTGTGGGAATGTTCCTGGCTGATATAATTGAGAAATACTTTGTTTCCCCAACCCTGTTCCGAGTCATCCGATTGGCCCGTATTGGGCGCATCTTGCGTCTGATCAAAGGCGCCAAAGGGATTCGTACCCTGCTCTTTGCCTTAATGATGTCCTTGCCTGCTCTGTTCAACATCGGCCTTCTGCTCTTCCTGGTCATGTTCATCTTCTCCATCTTTGGGATGTCCAATTTTGCATATGTAAAGCACGAGGCTGGCATTGATGACATGTTCAACTTTGAGACATTCGGCAACAGCATGATCTGCCTATTTCAGATCACAACCTCGGCCGGTTGGGATGGCCTGCTGCTGCCCATCCTAAACCGCCCCCCCGACTGCAGTCTGGATAAGGAACACCCAGGGAGTGGCTTTAAAGGAGACTGCGGGAACCCCTCAGTGGGCATCTTCTTCTTTGTGAGCTACATCATCGTCTCCTTCCTGATCGTGGTGAACATGTACATTGCCATCATCTTGGAGAACTTCAGCGTAGCCACGGAGGAAAGTGCAGACCCTCTGAGTGAGGATGACTTTGAGACCTTCTATGAGATCTGGGAGAAGTTCGACCCCGATGCCACCCAGTTCATCGAGTACAGTAAGCTGGCAGACTTTGCAGATGCCTTGGAGCATCCTCTCCGAGTGCCCAAGCCCAACACCATAGAGCTCATTGCCATGGATCTGCCAATGGTCAGCGGGGATCGCATCCACTGCTTGGACGTCCTTTTTGCCTTCACCAAGCGGGTCCTGGGAGATAGCGGAGAGTTGGACATCCTTCGGCAGCAGATGGAGGAGAGGTTCGTGGCATCCAATCCTTCCAAAATGTCTTACGAGCCAATCACGACCACGCTGCGGCGCAAGCAGGAAGAGGTGTCAGCAGTGGTCCTGCAGCGCGCCTACCGGGGACATTTAGCAAGGCGGGGCTTCATTTGCAAAAAGACAACTTCCAATAAGCTGGAGAATGGAGGCACCCACCGGGAGAAAAAAGAGAGCACCCCTTCTACAGCCTCCCTCCCATCCTATGACAGTGTAACTAAACCCGAGAAGGAGAAACAGCAACGGGCAGAGGAAGGAAGAAGGGAAAGAGCCAAAAGACAAAAAGAGGTCAGAGAATCCAAGTGTTAG

Related Sequences

bmy_07745T0 Protein

Length: 1509 aa      View alignments
>bmy_07745T0
ECKDGARLGKLTAFVQPLRGPLPVSCLPLCLSLFLPLQSLLSIPGSPFLSRHNSKSSIFSFRGPGRFRDPGSENEFADDEHSTVEESEGRRDSLFIPIRARERRSSYSGYSGYSQGSRSSRIFPSLRRSVKRNSTVDCNGVVSLIGGPGSHISGRLLPEVKIDKAATDDSATTEVEIKKKGPGSLLVSMDQLASYGRKDRINSILSVVTNTLVEELEESQRKCPPCWYKFANTFLIWECHPYWIKLKEIVNLIVMDPFVDLAITICIVLNTLFMAMEHHPMTPQFEHVLAVGNLVFTGIFTAEMFLKLIAMDPYYYFQEGWNIFDGFIVSLSLMELSLADVEGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQLFGKSYKECVCKINQDCELPRWHMHDFFHSFLIVFRVLCGEWIETMWDCMEVAGQAMCLIVFMMVMVIGNLVVLNLFLALLLSSFSADNLAATDDDGEMNNLQISVIRIKKGVAWTKLKVHAFMQAHFKQREADEVKPLDELYEKKANCIANHTGADIHRNGDFQKNGNGTTSGIGSSVEKYIIDEDHMSFINNPNLTVRVPIAVGESDFENLNTEDVSSESDPEGSKDKLDDTSSSEGSTIDIKPEVEEVPVEQPEEYLDPDACFTEGCVQRFKCCQVNIEEGLGKSWWILRKTCFLIVEHNWFETFIIFMILLSSGALAFEDIYIEQRKSIRTILEYADKVFTYIFILEMLLKWIAYGFVKFFTNAWCWLDFLIVAVSLVSLIANALGYSELGAIKSLRTLRALRPLRALSRFEGMRVVVNALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKYHYCFNESSEIRFEIEDVNNKTECEKLMEGNNTEIRWKNVKINFDNVGAGYLALLQVATFKGWMDIMYAAVDSRKPDEQPKYEDNIYMYIYFVIFIIFGSFFTLNLFIGVIIDNFNQQKKKIGLLSTLPHVKASCNCTFSFSLLYFGGQDIFMTEEQKKYYNAMKKLGSKKPQKPIPRPLNKIQGIIFDLVTQQAFDIVIMMLICLNMVTMMVETDTQSKQMENILYWINLVFVIFFTCECVLKMFALRHYYFTIGWNIFDFVVVILSIVGMFLADIIEKYFVSPTLFRVIRLARIGRILRLIKGAKGIRTLLFALMMSLPALFNIGLLLFLVMFIFSIFGMSNFAYVKHEAGIDDMFNFETFGNSMICLFQITTSAGWDGLLLPILNRPPDCSLDKEHPGSGFKGDCGNPSVGIFFFVSYIIVSFLIVVNMYIAIILENFSVATEESADPLSEDDFETFYEIWEKFDPDATQFIEYSKLADFADALEHPLRVPKPNTIELIAMDLPMVSGDRIHCLDVLFAFTKRVLGDSGELDILRQQMEERFVASNPSKMSYEPITTTLRRKQEEVSAVVLQRAYRGHLARRGFICKKTTSNKLENGGTHREKKESTPSTASLPSYDSVTKPEKEKQQRAEEGRRERAKRQKEVRESKC*