Sequence detailsbmy_07767 (Coding sequence)

Part of scaffold_338 (SequenceType object (1))

For more information consult the page for scaffold_338 (SequenceType object (1))

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

HIGD1CENSTTRG00000003789 (Bottlenosed dolphin)

Gene Details

HIG1 hypoxia inducible domain family, member 1C

External Links

Gene match(Ensembl Protein ID:ENSTTRP00000003561, Bottlenosed dolphin)

Protein Percentage 95.45%
cDNA percentage 98.48%
Ka/Ks Ratio 99.0 (Ka = 0.0224, Ks = 0.0002)

HIGD1CENSBTAG00000047358 (Cow)

Gene Details

Uncharacterized protein

External Links

Gene match(Ensembl Protein ID:ENSBTAP00000054417, Cow)

Protein Percentage 87.64%
cDNA percentage 89.14%
Ka/Ks Ratio 0.46412 (Ka = 0.0934, Ks = 0.2012)

Additional orthologs identified in other species via the OPTIC pipeline.

HIGD1C (Human)  

Genome Location

Sequence SequenceType object (2)

Length: 270 bp    Location:662093..658139   Strand:-
Raw sequence 
>bmy_07767
ATGTCTTCAGATAACCAGTGGTCAGCAGATGAGGACGAAGGCCAGTTATCCCGACTGATCAGGAAATCTAGAGATTCCCCCTTTGTCCCTGTAGGGATAGCAGGCTTTACGACTGTGGGGTCCTATGGTCTTTACAAGTTAAAATACAGAAGAGATCAGAAAATGTCCATTCATCTTATTCACATGAGAGTTGCTGCCCAAGGATTTGTTGTAAGAGCTGTGACTCTAGGTAACCTGCTTAATTTGTATCTTGTGTTCAACTGTCTTTGA

Related Sequences

bmy_07767T0 SequenceType object (3)

Length: 90 aa      View alignments
>bmy_07767T0
MSSDNQWSADEDEGQLSRLIRKSRDSPFVPVGIAGFTTVGSYGLYKLKYRRDQKMSIHLIHMRVAAQGFVVRAVTLGNLLNLYLVFNCL*