Part of scaffold_338 (Scaffold)

For more information consult the page for scaffold_338 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

ATF1 ENSTTRG00000003784 (Bottlenosed dolphin)

Gene Details

activating transcription factor 1

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000003553, Bottlenosed dolphin)

Protein Percentage 84.82%
cDNA percentage 86.56%
Ka/Ks Ratio 0.64208 (Ka = 0.1338, Ks = 0.2084)

ATF1 ENSBTAG00000018131 (Cow)

Gene Details

Cyclic AMP-dependent transcription factor ATF-1

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000024135, Cow)

Protein Percentage 95.87%
cDNA percentage 94.49%
Ka/Ks Ratio 0.14523 (Ka = 0.0237, Ks = 0.1633)

ATF1  (Minke Whale)

Gene Details

activating transcription factor 1

External Links

Gene match (Identifier: BACU008023, Minke Whale)

Protein Percentage 87.19%
cDNA percentage 89.53%
Ka/Ks Ratio 0.63483 (Ka = 0.1025, Ks = 0.1615)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 729 bp    Location:816454..762947   Strand:-
>bmy_07771
ATGGAAGATTCTCACAAGAATAACGCTTCAGAGACAGCACCTCAGTCTGGTTCAACAGTTCAGGGAGCTCATATTTCTCATATTCCTCAACAGAGTTCTGTTTTTCACAGAAAAATTTTGAAAGACCTATCTTCTGAAGATACACGGGGCAGAAAAGGAGACGGAGAAAATCCTGGAGTTTCTGCTGTCACTTCTATGTCTGTTCCAACTCCCATCTATCAGACTAGCACCGGACAGTACATTGCCATTGCCCCAAATGGAGCCTTACAGCTGGCCAGTCCAGGCACAGATGGAGTACAGGGGCTTCAGACATTAACCATGACAAATTCAGGCAGTACTCAACAAGGTACAACAATTCTCCAGTACGCACAGACCTCTGATGGACAGCAAATACTTGTGCCCAGCAACCAGGTGGTTGTACAAACTGCATCAGGAGATATGCAGACGTATCAGATCCGTACCACGCCTTCAGCTACTTCGCTACCACAAACCGTGGTGATGACATCTCCCGTAACCCTTACATCTCAGACAACTAAGACAGATGACCCCCAACTGAAAAGAGAAATAAGGTTGATGAAAAATAGAGAAGCTGCTCGAGAATGTCGCAGAAAGAAGAAAGAATATGTGAAATGTCTGGAAAATCGAGTTGCAGTCCTGGAAAATCAAAATAAAACTCTAATAGAAGAGTTGAAAACTTTGAAGGATCTTTATTCTAATAAAAGTGTTTGA

Related Sequences

bmy_07771T0 Protein

Length: 243 aa      View alignments
>bmy_07771T0
MEDSHKNNASETAPQSGSTVQGAHISHIPQQSSVFHRKILKDLSSEDTRGRKGDGENPGVSAVTSMSVPTPIYQTSTGQYIAIAPNGALQLASPGTDGVQGLQTLTMTNSGSTQQGTTILQYAQTSDGQQILVPSNQVVVQTASGDMQTYQIRTTPSATSLPQTVVMTSPVTLTSQTTKTDDPQLKREIRLMKNREAARECRRKKKEYVKCLENRVAVLENQNKTLIEELKTLKDLYSNKSV*