Part of scaffold_331 (Scaffold)

For more information consult the page for scaffold_331 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

PACS1 ENSTTRG00000014375 (Bottlenosed dolphin)

Gene Details

phosphofurin acidic cluster sorting protein 1

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000013640, Bottlenosed dolphin)

Protein Percentage 87.09%
cDNA percentage 87.3%
Ka/Ks Ratio 0.27775 (Ka = 0.0273, Ks = 0.0982)

BT.105034 ENSBTAG00000009026 (Cow)

Gene Details

phosphofurin acidic cluster sorting protein 1

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000011884, Cow)

Protein Percentage 96.41%
cDNA percentage 93.26%
Ka/Ks Ratio 0.06061 (Ka = 0.0182, Ks = 0.3006)

PACS1  (Minke Whale)

Gene Details

phosphofurin acidic cluster sorting protein 1

External Links

Gene match (Identifier: BACU003502, Minke Whale)

Protein Percentage 97.74%
cDNA percentage 97.61%
Ka/Ks Ratio 0.2423 (Ka = 0.0148, Ks = 0.0611)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 2559 bp    Location:202813..239643   Strand:+
>bmy_07788
ATGAACCGTGGTGACTCCAGTTTAACAAACCTGAACGTGTTTCAGGAGCACAGGCTGTTCAGCTTGACCCTGAAGAAACTTGTCATGCTAAAAGAAATGGACAAAGACCTTAACTCAGTGGTCATCGCTGTGAAGCTGCAGGGTTCAAAAAGGATTCTTCGCTCCAACGAGATCATCCTTCCAGCCAGTGGATTGGTGGAAACAGAGCTCCAGTTAACCTTCTCCCTCCAGTACCCTCATTTCCTGAAGCGAGATGCCAACAAGCTGCAGATCATGTTGCAGAGGAGAAAGCGTTACAAGAACCGGACCATCCTGGGCTATAAGACCCTGGCCGTGGGGCTCATCAACATGGCAGAGGTGATGCAGCACCCGAACGAAGGCGCCCTGGTACTCGGCCTGCACAGCAACGTGAAGGATGTCTCCGTGCCTGTGGCAGAAATAAAGATCTACTCCCTGTCCAGCCAGCCCATTGACCATGAAGGAATCAAGTCCAAGCTGTCTGACCGTTCTCCTGATATTGACAACTATTCTGAGGAAGAGGAGGAGAGTTTCTCATCAGAACAGGAAGGCAGTGATGATCCACTACACGGGCAGGACCTGTTCTATGAAGATGAGGATCTTCGGAAAGTAAAGAAGACCCGGAGGAAACTAACCTCMACGTCTGCCATCACAAGGCAACCTAACATCAAACAGAAGTTTGTGGCCCTCCTGAAGCGGTTTAAAGTTTCAGACGAGGTGGGCTTTGGGCTGGAACACGTATCCCGGGAACAGATACGAGAAGTGGAAGAAGACTTGGACGAGCTGTATGACAGTCTGGAGATGTACAATCCCAGCGACAGTGGTCCCGAGATGGAGGAGACAGAGAGCATCCTTAGCACGCCAAAGCCCAAGCTCAAGCCCTTCTTTGAGGGGATGTCGCAGTCCAGCTCACAGACGGAGATTGGCAGCCTCAACAGCAAGGGCAGCCTCGGCAAAGACACCACCAGCCCTGTGAGCAAGACCAATGGCTGTGGGATGGAATTGGCTGCTTTAGAAAAAGTCAAATCTGCTTGGATTAAAAATCAAGATGACAGCTTGACTGAAACAGACACTCTGGAAATCACTGACCAGGACATGTTGGGAGACGTGAGCGCAAGTCTGGTTGTGCCAGAGAAAGTCAAAACTCCGATGAAGTCCAGTAAAACGGACCTCCAGGGCTCTGCCTCTCCCAGGTACTCAGGGTTGGAAGAAGCTCCTAAAGCGTCGGGTAGAATGAGGGAGGCCCGGCAGGAGGGGCCTCGGGAAGAGGGGGCAGGCCATGGCTCTGGGTCAGGGGGCTGTTTAACCGCCTCCTTCGACGTCTGTGGCAGCAAAGTGGACGGGGTGCACACCCCCCGGCAGAAGAGGAGCACTCCCCTGAAGGAGCGGCAGCTCTCCAAGCCCCTGAGCGAGAGAACCAACAGCTCCGACAGCGAGCGGTCCCCGGACCTGGGCCACAGCACGCAGATTCCAAGGAAGGTGGTATATGACCAACTGAATCAGATCCTGGTGTCGGATGCAGCCCTCCCAGAAAACGTCATCCTTGTGAACACCACTGATTGGCAGGGCCAGTACGTGGCAGAGCTGCTCCAGGACCAGCGGAAGCCCGTCGTGTGCACATGCTCCACGGTGGAGGTCCAGGCCGTGCTGTCCGCCCTGCTCACCCGTATCCAGCGCTACTGCAACTGCAACTCCTCCATGCCGAGGCCGGTGAAGGTGGCAGCGGTGGGCGGCCAGAGCTACCTGAGTTCCATCCTCCGCTTCTTCGTCAAGTCGCTGGCCAGCAAGACCTCTGACTGGCTGGGCTACATGCGCTTTCTCATCATTCCCCTTGGTTCTCACCCGGTGGCCAAGTACTTGGGCTCCGTCGACAGTAGGTATAGCAGTACATTCCTTGATTCTGGCTGGAGAGATCTGTTCAACCGCTCAGAGCCCCCGGTGTCAGAGCACCTGGACGTGGTCGGGCGGGTGATGCAGTACATCAGCGGCGCGGGCGTGACGCACCAGCTACCCGTGGCGGAAGCCATGCTGACCTGCAGGCACAAGTTCCCTGATGAAGACTCGTATCAGAAGTTTATCCCCTTCATTGGCGTGGTGAAGGTGGGTCTGGTCGAAGACTCTCCTTCCACTACAGGCGATGGTGATGACTCACCCGTGGTCAGCCTTACTGTGCCCTCCACGTCGCCGCCCTCCAGCTCTGGCCTGAGCCGAGATGCCATGGCCACCCCTCCTTCCTCCCCGTCCATGAGCAGCGCCCTGGCCGTCGTGGGGGGCTGTGACAAGGCGGTTCCTGCTTGCTTTCCAGTTCCCACCATCTTCCTGAGCAAGAAGCCTCGAGAAAAGGAGGTGGATTCTAAGAGCCAGGTCATCGAAGGCATCAGCCGCCTCATCTGCTCTGCCAAGCAGCAGCAGACCATGCTGAGAGTGTCTATCGACGGAGTCGAGTGGAGTGACATCAAGTTCTTCCAGCTGGCAGCCCAGTGGCCCACCCACGTCAAGCACTTTCCAGTGGGACTGTTCAGTGGCAGCAAGGCCACCTGA

Related Sequences

bmy_07788T0 Protein

Length: 853 aa      View alignments
>bmy_07788T0
MNRGDSSLTNLNVFQEHRLFSLTLKKLVMLKEMDKDLNSVVIAVKLQGSKRILRSNEIILPASGLVETELQLTFSLQYPHFLKRDANKLQIMLQRRKRYKNRTILGYKTLAVGLINMAEVMQHPNEGALVLGLHSNVKDVSVPVAEIKIYSLSSQPIDHEGIKSKLSDRSPDIDNYSEEEEESFSSEQEGSDDPLHGQDLFYEDEDLRKVKKTRRKLTSTSAITRQPNIKQKFVALLKRFKVSDEVGFGLEHVSREQIREVEEDLDELYDSLEMYNPSDSGPEMEETESILSTPKPKLKPFFEGMSQSSSQTEIGSLNSKGSLGKDTTSPVSKTNGCGMELAALEKVKSAWIKNQDDSLTETDTLEITDQDMLGDVSASLVVPEKVKTPMKSSKTDLQGSASPRYSGLEEAPKASGRMREARQEGPREEGAGHGSGSGGCLTASFDVCGSKVDGVHTPRQKRSTPLKERQLSKPLSERTNSSDSERSPDLGHSTQIPRKVVYDQLNQILVSDAALPENVILVNTTDWQGQYVAELLQDQRKPVVCTCSTVEVQAVLSALLTRIQRYCNCNSSMPRPVKVAAVGGQSYLSSILRFFVKSLASKTSDWLGYMRFLIIPLGSHPVAKYLGSVDSRYSSTFLDSGWRDLFNRSEPPVSEHLDVVGRVMQYISGAGVTHQLPVAEAMLTCRHKFPDEDSYQKFIPFIGVVKVGLVEDSPSTTGDGDDSPVVSLTVPSTSPPSSSGLSRDAMATPPSSPSMSSALAVVGGCDKAVPACFPVPTIFLSKKPREKEVDSKSQVIEGISRLICSAKQQQTMLRVSIDGVEWSDIKFFQLAAQWPTHVKHFPVGLFSGSKAT*