Part of scaffold_331 (Scaffold)

For more information consult the page for scaffold_331 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

NPAS4 ENSTTRG00000001951 (Bottlenosed dolphin)

Gene Details

neuronal PAS domain protein 4

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000001832, Bottlenosed dolphin)

Protein Percentage 86.48%
cDNA percentage 86.31%
Ka/Ks Ratio 0.15731 (Ka = 0.0066, Ks = 0.0422)

NPAS4 ENSBTAG00000014925 (Cow)

Gene Details

Uncharacterized protein

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000019870, Cow)

Protein Percentage 95.4%
cDNA percentage 94.31%
Ka/Ks Ratio 0.16259 (Ka = 0.0247, Ks = 0.1517)

NPAS4  (Minke Whale)

Gene Details

neuronal PAS domain protein 4

External Links

Gene match (Identifier: BACU003510, Minke Whale)

Protein Percentage 99.61%
cDNA percentage 99.56%
Ka/Ks Ratio 0.19475 (Ka = 0.0019, Ks = 0.01)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 2286 bp    Location:371585..375541   Strand:+
>bmy_07799
ATGTATCGCTCCACCAAGGGCGCCTCCAAGGCGCGCCGCGACCAGATCAACGCTGAGATCCGGAACCTCAAGGAGCTGCTGCCGCTGGCTGAAGCGGACAAGGTCCGGCTGTCCTACCTGCACATTATGAGTCTTGCCTGCATCTACACTCGCAAGGGCGTCTTCTTCGCTGGAGGCACTCCTCTGGCGGGCCCCACAGGGCTTCTCTCAGCTCAAGAGCTTGAAGACATAGTGGCAGCACTACCTGGCTTCCTGCTTGTGTTCACGGCGGAGGGGAAGCTGCTGTATCTCTCTGAGAGTGTGAGCGAGCATCTGGGCCACTCCATGGTGGACCTGGTTGCCCAGGGTGACAGTATCTACGACATCATTGACCCAGCTGACCACCTAACTGTGCGCCAGCAACTCACCCTGCCCTCTGCTCTGGATAATGATCGCCTCTTCCGCTGTCGCTTCAACACCTCCAAGTCCCTCAGGCGCCAGAGTGCAGGCAACAAACTGGTGCTTATTCGAGGCCGATTCCACGCTCACCCACCTGGGGCCTACTGGGCAGGAAATCCTGTGTTCACAGCTTTCTGTGCTCCACTGGAGACAAGACCCCGTCCTGGCCCTGGCCCTGGTCCTGGCCCTGGCCCTGCCTCACTTTTCTTGGCCATGTTCCAGAGCCATCACGCTAAGGACCTGGCCCTTCTGGACATCTCAGAGAGTGTCCTAATCTACCTGGGCTTTGAGCGCAGTGAACTGCTCTGTAAATCATGGTATGGACTGCTGCACCCTGAGGACCTGGGCCACGCTTCTGCTCAACACTACCGCCTGTTGGCTGAGAGTGGAGATATTCAAGCAGAGATGGTGGTGAGACTGCTGGCCAAGCCTGGAGGCTGGGCGTGGATTTATTGCCTTTTATATTCAGAAGGTCCGGAGGGTCCCATTACTGCCAATAACTACCCAATCAGTGATACAGAAGCCTGGAGCCTCCGCCAGCAGTTAAACTCTGAAGAAACCCAGGCAGCCTATGTCCTGGGCACCCCGACCATGCTGCCCTCATTCCCGGAGAACATCCTCTCCCAGGAACAATGCTCTGGCCCTAATCCACTCTTCACCATGGGGCCTCCCCGAAGCACCGATTTCCCCAGTGCTCCTGAGCTGGGTGCTGTCTCAACACCAGAAGAGCTTCCCCGACCCCCCAAAGAGCTTGGCTTCAGTTACCTGACATTCCCATCTGGCCCTGAGCCTTCTCTTCAAGCAGACCTGAGCAAGGATCTTGTGTGCACCCCACCCTACACGCCCCACCAGCCGGGAGGCTGTGCCTTCCTCTTCAGCCTCCATGAGCCCTTCCAGACCCACTTGCCCACTCCATCCAGCTCTCTCCAAGAACAGCTGACTCCAAGCACTGTGACCTTCTCTGATCAATTGACGCCCAGCAGTGCAACTTTCCCAGATCCGCTGACTAGCCCACTACAAGGCCAACTGACTGAAACCTCAGCCAGAAGCTATGAAGATCCTTGCACCTCCACTTTCCCAGATCAGCTGCTTTCCAGCACTGCCACCTTCCCAGAGCCTCTGAACAGCCCTGCCCGTGAGCAGGTGACTTCTCCAAGCACAGCATTCCAAGCACACCTGAACAGCCCCAGCCAAACTTTCCCAGAGCAACTGAGCCCCAATCCCACCAAGACTTACTTCGCCCAGGAGGGATGCAGTTTTCTCTATGAGAAGTTGCCCCCAAGTCCTAGCAGCCCTGGTAATGGGGACTGCACACTCCTGGCCCTAGCCCAGCTCCGGGGCCCCCTCTCTGTGGATGTCCCCCTGGTGCCCGAAGGCCTGCTTACACCTGAGGCCTCTCCAGTCAAGCAGAGTTTCTTCCACTATTCTGAGAAGGAGCAGAATGAGATAGACCGTCTCATCCAGCAAATCAGCCAGTTGGCTCAGGGCATGGACAGGCCCTTCTCAGCTGAGGCTGGCACGGGTGGGCTAGAGCCACTTGGGGGGCTGGAGCCCCTGGACGCTAACCTTTCCCTGGCAGGAGCTGGCCCCCCTGTGCTCAGCCTGGACCTGAAACCCTGGAAATGCCAGGATCTGGATTTCCTGGCTGACCCTGATATATTCCTGGAAGAGACGCCCGTGGAAGACATCTTCATGGATCTCTCTACCCCAGACCCCAATGGGGAATGGAGTTCAGAGGATCCTGAGGCAGCAGTCCCAGGAGGGGCCCCATCACCTTGCAACAACCTGTCCCCAGAAGATAGCAGCTTCCTGGAGGACCTGGCCACATACGAAACCGCCTTTGAGACA

Related Sequences

bmy_07799T0 Protein

Length: 762 aa      View alignments
>bmy_07799T0
MYRSTKGASKARRDQINAEIRNLKELLPLAEADKVRLSYLHIMSLACIYTRKGVFFAGGTPLAGPTGLLSAQELEDIVAALPGFLLVFTAEGKLLYLSESVSEHLGHSMVDLVAQGDSIYDIIDPADHLTVRQQLTLPSALDNDRLFRCRFNTSKSLRRQSAGNKLVLIRGRFHAHPPGAYWAGNPVFTAFCAPLETRPRPGPGPGPGPGPASLFLAMFQSHHAKDLALLDISESVLIYLGFERSELLCKSWYGLLHPEDLGHASAQHYRLLAESGDIQAEMVVRLLAKPGGWAWIYCLLYSEGPEGPITANNYPISDTEAWSLRQQLNSEETQAAYVLGTPTMLPSFPENILSQEQCSGPNPLFTMGPPRSTDFPSAPELGAVSTPEELPRPPKELGFSYLTFPSGPEPSLQADLSKDLVCTPPYTPHQPGGCAFLFSLHEPFQTHLPTPSSSLQEQLTPSTVTFSDQLTPSSATFPDPLTSPLQGQLTETSARSYEDPCTSTFPDQLLSSTATFPEPLNSPAREQVTSPSTAFQAHLNSPSQTFPEQLSPNPTKTYFAQEGCSFLYEKLPPSPSSPGNGDCTLLALAQLRGPLSVDVPLVPEGLLTPEASPVKQSFFHYSEKEQNEIDRLIQQISQLAQGMDRPFSAEAGTGGLEPLGGLEPLDANLSLAGAGPPVLSLDLKPWKCQDLDFLADPDIFLEETPVEDIFMDLSTPDPNGEWSSEDPEAAVPGGAPSPCNNLSPEDSSFLEDLATYETAFET