Part of scaffold_331 (Scaffold)

For more information consult the page for scaffold_331 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

CCDC87 ENSBTAG00000004342 (Cow)

Gene Details

Uncharacterized protein

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000005681, Cow)

Protein Percentage 84.36%
cDNA percentage 90.16%
Ka/Ks Ratio 0.44925 (Ka = 0.0825, Ks = 0.1835)

CCDC87  (Minke Whale)

Gene Details

coiled-coil domain containing 87

External Links

Gene match (Identifier: BACU003518, Minke Whale)

Protein Percentage 96.04%
cDNA percentage 97.83%
Ka/Ks Ratio 0.60677 (Ka = 0.0185, Ks = 0.0306)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 2580 bp    Location:525527..522948   Strand:-
>bmy_07807
ATGGAGCCGTATAAGCCCGAGCCCGAGTTCCAGCGGTTTTACCACCGGTTGCTGCGTCCGCTGTCTCTCTTCCCCCGCACGACGACGCGCACAGAGTCTCAGAAGCGCCTCCCGCAGGAGGTCCCGATGCTGCCTTCCCTACCGGTCTCACGGCTGACGGTGGCGTCGCTCTGCCGCCGGGTAGCCGAGCGGCTGGCCAACAGCGGGCTGGAGGCGCGCGCGCCTCGCAAGGTACGACTCCGTTTCACCGAGGTCATCTTGGACGAGCTAAAGTGCAGCTGGCAGGAGCCCCCCACCGAACCTGGTCTGAGCCACTTGAACAATCGGAGGCTGCGGAAGCGGCTCCTGGTCTACGTGCTGCTCAGCAGCGAGCAGCTCTTCGTACGCTACCTGCACCTTCAGAAGATCATGTCGACCCCCGCAGCTGTCTTCACCGAATCAGCCACGCTCACCCGGTTGGCCGCCAGCCTCGCCAGGGACTGCACAGTCTTCCTCACCGGCCCCGAGGTCTACCGTGGCCTGCTCGCTGACTTCTGCGCCCTGCTGAAGGAAGGCCAGGTCCAAGTCTGCGTGCCCAGAGTGCGCCCCCTCGGCCCCACTGGGGCTTTCAGGCTCTGCCCTATCCCATGGCATCACAGCACTGGCTTTGCCCAAGTGCCGTATTTCAACCTCAGCCTGAACTACCTCATCCAGCTCAGCCGCCCGCGGGAGTTTGTCAGTGAGCCTGAACCGGATCCAGTGAAGGAATTGAAGTCCATTCCCCAGCTGAAGAAGAGGAAGCCTCTCTGCTGGCTGTCCACCATGCAAAAGAGGAGAGAAAGCAACTTCAATTCACAGATTGCCTCACTGCCYGGGTCCTCTGTGGCTCCCCCCAGCCAGGCTCCCCCCACCTCCCACTTGCCCCTCTCCTCCCAGCTCCAGAGGGGCCAGTCCATGCCCTCTCTGCGTGAGGGCTGGAAACTAGCAGATGAGTTGGGCCTTCCTCCACTCTCTCCTCGCCCCTTAACCCCACTGGTCCTGCTTGCAGAGAGCAAACCAGAGCTGGAAGGGGACACTGTGGCTGAGGACCTGAAGCAGAGGATGAAGAACATGCAATTGGGGTGGTCTCACTACTCACCGCTGGACTCGGGCCTGCCCCCACTCTTGGGGGCCCTGACCTACCGCCCAGCTGCAACACATCACATGGAAGAGCTGCAGAGAATGTTGAAGGGCCTCGAGGAGAAGGAAGCCTCAGAGCAGTGGAGCCTCCAGTCCCCCAGATCCCCTCCCCTTGAACCACAGCCAGTGACTGTTACTTTGAAGCTAAGAAATCAGGTGGTCCAGGCAGCTGCTGTACAGGTCTCAGCAAGAAACTTTTTGGATTCCTTCCACGTTGAGGGGGCCGGAGTCCTATACAACCACCTGGCTGGTGAACTGGAACCCAAACTTATGGAGGAAATGGATACTGATCGCACTTTTGGCAGTAGCATCAGGGAGGTCTACAAGGAGCTGATGAGCCGTGTCTCTAATGACCACTTCTCTTTTGACCAGGGGCCCCTGGTTGAGCCTGCAGCCAATAAAGACTGGTCGGCCTTCCTATCCTCAGCCTTTCTACGTCAAGAAAAACAGCGTCGTATCATCAACACCAAGCTGGCTGGACTTTATTYCCAGAGAGCCAACACTTTACAGTCCAACCCTGATAAGATGTCCTCCCTCACATCACTCCAAGCAAGTAAAAGCTGGGAGAAGTGGTCAAACAAGGCCTCATGGCTGAACTGGTGGAAAACGACTTTGTCTGTGGGTGACTACTTCAAGTACCTCACCACCCAGCAGACAGATTTCCTCCATGTCATCTTCCAAATGTATGAAGAAGAGGTTCCTGTGGAGATCGTGGCCCCTGTCAGAGAGTCCCTGAAGATTCAGCACCCACCGCCCTTGCTGGAAGACGACGAGCCAGAATTTGTGCCAGGAGAATGGGATTGGGACACGGTGCTGGAGCGCAGGCTGGGAACTAAGAACAACAGCCTCCTGGAAGACTCTCACAAAATCCTGAGCCTGCAGAAGCGTCTGGAGCGGCTGTGGTCCATGCTTGAGGTCCCTGACAAAGACCGGCTGGACATGGCCATCAAGTACAGCTCCAATGCCCGCCTGAGGCAGCTGCCGTCACTGGTGAGTGCCTGGGAGCGGGCCTTGCAGCCCATTCAGCTGCGGGAGATATTGCTGGGGAGACTGGAGTGCTTTGAGCGACAAGCCTCCGACCCTAACCGCTTCTTCCACAAGACCGACATGGGCCTGAGTCGCTTCCTGGAGGAGAATCAGATCCGCAACCATCTCCATAAGAGGCTCAGTCTAGTGGAGGCTCCTTTGGTCCCCCTCCTGGAGGAGATCGAGTTAGTCTTTGGTGAGCCAGTGACCTTCAAGGGGCGGCGCTACCTGGACAAGATGAAGCATGACAAAGTGGAGATGCTCTACTGGCTGCAGCAGCGGCGGCGGGTCCGCCACCTGGTCCGGGCCAAGAGGGCCTCCCATCAGTCAGCCCTGTCCAGGAAGCTCAGCAGCCAGCCTTTAATAGCCCCTGGGAGTACTCCCATTACTCTTTGA

Related Sequences

bmy_07807T0 Protein

Length: 860 aa      View alignments
>bmy_07807T0
MEPYKPEPEFQRFYHRLLRPLSLFPRTTTRTESQKRLPQEVPMLPSLPVSRLTVASLCRRVAERLANSGLEARAPRKVRLRFTEVILDELKCSWQEPPTEPGLSHLNNRRLRKRLLVYVLLSSEQLFVRYLHLQKIMSTPAAVFTESATLTRLAASLARDCTVFLTGPEVYRGLLADFCALLKEGQVQVCVPRVRPLGPTGAFRLCPIPWHHSTGFAQVPYFNLSLNYLIQLSRPREFVSEPEPDPVKELKSIPQLKKRKPLCWLSTMQKRRESNFNSQIASLPGSSVAPPSQAPPTSHLPLSSQLQRGQSMPSLREGWKLADELGLPPLSPRPLTPLVLLAESKPELEGDTVAEDLKQRMKNMQLGWSHYSPLDSGLPPLLGALTYRPAATHHMEELQRMLKGLEEKEASEQWSLQSPRSPPLEPQPVTVTLKLRNQVVQAAAVQVSARNFLDSFHVEGAGVLYNHLAGELEPKLMEEMDTDRTFGSSIREVYKELMSRVSNDHFSFDQGPLVEPAANKDWSAFLSSAFLRQEKQRRIINTKLAGLYXQRANTLQSNPDKMSSLTSLQASKSWEKWSNKASWLNWWKTTLSVGDYFKYLTTQQTDFLHVIFQMYEEEVPVEIVAPVRESLKIQHPPPLLEDDEPEFVPGEWDWDTVLERRLGTKNNSLLEDSHKILSLQKRLERLWSMLEVPDKDRLDMAIKYSSNARLRQLPSLVSAWERALQPIQLREILLGRLECFERQASDPNRFFHKTDMGLSRFLEENQIRNHLHKRLSLVEAPLVPLLEEIELVFGEPVTFKGRRYLDKMKHDKVEMLYWLQQRRRVRHLVRAKRASHQSALSRKLSSQPLIAPGSTPITL*