Sequence detailsbmy_07821 (Coding sequence)

Part of scaffold_331 (SequenceType object (1))

For more information consult the page for scaffold_331 (SequenceType object (1))

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

SYT12ENSTTRG00000001874 (Bottlenosed dolphin)

Gene Details

synaptotagmin XII

External Links

Gene match(Ensembl Protein ID:ENSTTRP00000001758, Bottlenosed dolphin)

Protein Percentage 99.05%
cDNA percentage 98.89%
Ka/Ks Ratio 0.06995 (Ka = 0.003, Ks = 0.0432)

SYT12ENSBTAG00000003369 (Cow)

Gene Details

synaptotagmin-12

External Links

Gene match(Ensembl Protein ID:ENSBTAP00000004370, Cow)

Protein Percentage 97.62%
cDNA percentage 93.98%
Ka/Ks Ratio 0.0236 (Ka = 0.0089, Ks = 0.3787)

SYT12 (Minke Whale)

Gene Details

synaptotagmin XII

External Links

Gene match (Identifier: BACU003526, Minke Whale)

Protein Percentage 96.87%
cDNA percentage 96.72%
Ka/Ks Ratio 0.20625 (Ka = 0.0198, Ks = 0.096)

Additional orthologs identified in other species via the OPTIC pipeline.

SYT12 (Human)   Syt12 (Mouse)  

Genome Location

Sequence SequenceType object (2)

Length: 1344 bp    Location:909624..926712   Strand:+
Raw sequence 
>bmy_07821
ATGTGCTTTGGCTTCTCCCGTTCCCAGGGCACATCTGCGGGACCTTCTGGCCTGGTCTCAGCCCCTGCGGCGGGCGTCATGGCCGTGGACGTGGCAGAATACCACCTGAGCGTCATCAAGAGCCCCCCGGACTGGGAAGTGGGTGTCTATGCTGCCGGGGCCCTGGCACTGCTGGGAATTGCAGCTGTGAGCCTGTGGAAGCTCTGGACGTCGGGGAGCTTCCCCAGCCCCTCCCCGTTCCCAAACTACGACTACAGGTACCTTCAGCAGAAGTATGGTGAGAACTACGCAGAGGCCCGGCAGAAGAGAGTGCCTGCCTGGAATGCCCAGCGGGCCAGCACTAGGGGGCCACCCAGTCGCAAAGGCAGCCTCAGCGTTGAGGACACCTTTGAGAGCATCAGCGAGCTGGGACCCCTGGAGCTGATGGGCCGTGAGCTGGACCTGGCCCCCTACGGGGCCCTCCGAAAATCCCAGTCGGCCGACTCCCTGAACTCCATCTCCTCCGTGAGCAACACCTTCGGGCAGGACTTCACGCTGGGCCAGGTGGAGGTGAGCATGGACTACGATGCCGCCTCCCACACCCTCCACGTGGCTGTGCTGCAGGGCAAGGACCTCCTGGAGCGGGAGGAAGCCAGCTTCGAGTCCTGCTTCATGCGCGTCAGCCTGCTGCCGGACGAGCAGATCGTGGGCATTTCCCGGATCCAGAGGAACGCCTACTCCATCTTCTTCGACGAGAAGTTCTCCATCCCCCTGGACCCTGCAGCCCTGGAGGAGAAGAGCCTGCGGTTTTCCGTGTTTGGCATCGATGAAGATGAGCGGAATGTGAGCACAGGGGTGGTGGAGCTGAAGCTTTCTGTGCTTGACCTCCYGCTGCAGCCCTTCGGCGGCTGGCTCTACCTACAGGACCAGAACAAGGCCGCCGACGCTGTGGGCGAGATCCTGCTGTCCCTCAGCTACCTCCCGACGGCCGAGCGCCTTACAGTGGTCGTGGTGAAAGCCAAGAATCTCATCTGGACCAACGACAAGACCACAGCGGACCCCTTCGTCAAGGTGTACCTGCTGCAGGATGGGAGGAAGATGAGCAAAAAGAAGACGGCTGTGAAGAGGGACGACCCTAACCCAGTGTTCAATGAAGCCATGATCTTCTCAGTGCCAGCCATTGTGCTCCAGGACCTGTCTCTCCGTGTGACGGTAGCTGAGAGCAGCAGCGATGGCCGTGGGGACAACGTGGGCCACGTCATCATTGGGCCGTCGGCCAGTGGCATGGGCACCACGCACTGGAACCAGATGCTGGCCACGCTGCGCAGGCCCGTGTCCATGTGGCACCCTGTCCGGCGAAACTAG

Related Sequences

bmy_07821T0 SequenceType object (3)

Length: 448 aa      View alignments
>bmy_07821T0
MCFGFSRSQGTSAGPSGLVSAPAAGVMAVDVAEYHLSVIKSPPDWEVGVYAAGALALLGIAAVSLWKLWTSGSFPSPSPFPNYDYRYLQQKYGENYAEARQKRVPAWNAQRASTRGPPSRKGSLSVEDTFESISELGPLELMGRELDLAPYGALRKSQSADSLNSISSVSNTFGQDFTLGQVEVSMDYDAASHTLHVAVLQGKDLLEREEASFESCFMRVSLLPDEQIVGISRIQRNAYSIFFDEKFSIPLDPAALEEKSLRFSVFGIDEDERNVSTGVVELKLSVLDLXLQPFGGWLYLQDQNKAADAVGEILLSLSYLPTAERLTVVVVKAKNLIWTNDKTTADPFVKVYLLQDGRKMSKKKTAVKRDDPNPVFNEAMIFSVPAIVLQDLSLRVTVAESSSDGRGDNVGHVIIGPSASGMGTTHWNQMLATLRRPVSMWHPVRRN*