Part of scaffold_331 (Scaffold)

For more information consult the page for scaffold_331 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

PTPRCAP ENSBTAG00000004782 (Cow)

Gene Details

protein tyrosine phosphatase receptor type C-associated protein precursor

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000006279, Cow)

Protein Percentage 81.19%
cDNA percentage 86.3%
Ka/Ks Ratio 0.21554 (Ka = 0.1004, Ks = 0.4657)

PTPRCAP  (Minke Whale)

Gene Details

protein tyrosine phosphatase, receptor type, C-associated protein

External Links

Gene match (Identifier: BACU003536, Minke Whale)

Protein Percentage 74.07%
cDNA percentage 83.33%
Ka/Ks Ratio 0.72262 (Ka = 0.1859, Ks = 0.2572)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 618 bp    Location:1226950..1225151   Strand:-
>bmy_07834
ATGGACCTGCCCTGCGTCCTAGGGCTCTGGGCACTGCTGGCCCTGCCAGGGGTCCTGGGCTCAGGCGGCGGCGCCAAGGACAGCCCGGGCTCCAGCTCCTCGGTCACCGTCGTCCTGCTGCTGCTGCTGCTGCTGCTGCTGGCCGCTGGCCTGGCGCTGGCCTGGTGCCGCCTGAGCCGGGACTCGGGGGGCTACTACCACCCGGCCCGCCTGGGCGCCGCGCTGTGGGGCCGCACTCGCCGCCTGCTCTGGGCCAGCCCGCCAGGCCGCTGGCTCCGGGCTGAGCTGGGGTCGCCAGAGGAGGACCCGGAGCGGCAGGAGGACGAGCAGGACGCGGAAGATGACTACGACCTGGGTGGTGGCCACGGGGAGCGTGAACCCCAGGGAGGGGCGCAGCGTGGAGAGGGGTCCAGCCCACAGCAGGCCCCGGAGCCGGCCGAGGAAGCCTATGACGATGACGCCGGAGGGGGCCTGGGCCTCGGCTCCCAGGGGCCGGTGGGCTCAAGGGGCAGCGCCGAGGCCCTGCTGAGTGACCTGCACGCCTTCGCTGGCAGCGCGGCCTGGGACGACAGCACTAGGGCAGCTGGGGGCCAGGGCCTCCACGTCACCGCACTGTAG

Related Sequences

bmy_07834T0 Protein

Length: 206 aa      View alignments
>bmy_07834T0
MDLPCVLGLWALLALPGVLGSGGGAKDSPGSSSSVTVVLLLLLLLLLAAGLALAWCRLSRDSGGYYHPARLGAALWGRTRRLLWASPPGRWLRAELGSPEEDPERQEDEQDAEDDYDLGGGHGEREPQGGAQRGEGSSPQQAPEPAEEAYDDDAGGGLGLGSQGPVGSRGSAEALLSDLHAFAGSAAWDDSTRAAGGQGLHVTAL*