Part of scaffold_327 (Scaffold)

For more information consult the page for scaffold_327 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

HARS ENSTTRG00000001760 (Bottlenosed dolphin)

Gene Details

histidyl-tRNA synthetase

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000001667, Bottlenosed dolphin)

Protein Percentage 93.79%
cDNA percentage 94.52%
Ka/Ks Ratio 0.41892 (Ka = 0.0435, Ks = 0.1038)

HARS ENSBTAG00000018847 (Cow)

Gene Details

Histidine--tRNA ligase, cytoplasmic

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000025094, Cow)

Protein Percentage 94.3%
cDNA percentage 92.47%
Ka/Ks Ratio 0.16662 (Ka = 0.0369, Ks = 0.2213)

HARS  (Minke Whale)

Gene Details

histidyl-tRNA synthetase

External Links

Gene match (Identifier: BACU015949, Minke Whale)

Protein Percentage 98.9%
cDNA percentage 99.14%
Ka/Ks Ratio 0.2697 (Ka = 0.0051, Ks = 0.0188)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 2553 bp    Location:23188..38903   Strand:+
>bmy_07851
ATGGCAGATCGTGCCACGCTGGAGGATCTTGTGCGACTTCAGGGAGAGCGCGTGCGGGCCCTTAAGCAGCAGAAGGCCGGCGCCGAGCAGATCGAGGAGGAGGTGGCAAAACTACTGAAACTGAAGGCACAACTGGGCCCTGATGAAGGGAAACAGAAGTTTGTGCTCAAAACCCCCAAGGGCACAAGAGACTACAGTCCCCGGCAGATGGCAGTTCGGGAGAAGGTGTTTGATGTAATCATCAGCTGTTTCAAGCGCCACGGTGCAGAAGTAATTGATACACCTGTGTTTGAACTAAAGGAAACACTGACTGGAAAGTATGGGGAAGACTCTAAGCTTATCTATGACCTGAAGGACCAAGGTGGGGAGCTGCTATCTCTTCGCTATGACCTCACTGTTCCTTTTGCTCGATATTTGGCAATGAATAAACTGACCAACATTAAACGCTACCACATAGCAAAAGTATATCGGCGGGATAACCCAGCCATGACCCGAGGCCGATATCGGGAATTCTACCAGTGTGTGAGTATGGAGGCAGGATGGGATTTTGACATTGCTGGGCAATTTGACCCCATGATTCCTGATGCAGAGTGCCTGAAGATAATGTGTGAGATCCTGAGTTCACTCCAGATAGGCGACTTCCTGGTCAAGGTGAATGATCGGCGCATCCTAGATGGGACGTTTGCCGTCTGTGGTGTTCCTGACAGCAAGTTCCGCACCATCTGCTCCTCAGTGGACAAGCTGGACAAGGTGTCCTGGGAGGAAGTAAAGAGTGAGATGGTGGGAGAGAAGGGCCTGGCACCTGAGGTGGCTGACCGCATTGGGGACTACGTCCAGCAGCATGGTGGGGTATCCCTGGTGGAACAGCTGCTCCAGGATCCTAAATTGTCCCAAAACAAGCAGGCCTTGGAGGGCCTGGGAGACCTGAAGCTGCTATTTGACTATCTGACCTTGTTTGGCATTGCTGACAAGATCTCCTTCGACCTGAGCCTTGCTCGAGGGCTGGACTACTATACCGGGGTGATCTATGAGGCGGTGCTGCTACAGCCCCCAGCCCAGGCAGGGGAAGAGCCCCTGGGTGTGGGCAGTGTGGCGGCTGGAGGGCGCTATGATGGGCTGGTGGGCATGTTTGATCCCAAAGGGCGCAAGGTGCCATGCGTGGGGCTCAGCATTGGGGTAGAGCGGATCTTCTCCACTGTGGAGCAGAGGCTGGAGGCCTTGGAGGAGAAGGTACGGACCACAGAAACACAGGTGCTTGTGGCATCTGCACAGAAGAAGCTGCTGGAGGAGAGACTGAAGCTCATCTCAGAGTTATGGGATGCTGGGATCAAGGCAGAGCTGCTCTACAAGAAGAACCCCAAGTTACTGAACCAGCTGCAGTACTGTGAGGAGGCAGGCATCCCACTGGTGGCCATCGTTGGTGAGCAAGAGCTCAAGGACGGGGTCATCAAGCTCCGCTCGGTGGCCAGCAGGGAAGAGCTGTGGTGTGAGAGGGTGAATCCAGAGAACAAGGCGGCGCTGGAGGCGTGGGTCAGGGAGACGGGCATCCGCCTGGTGCAGGTGAACGGGCAGAGGAAGTATGGCGGGCCACCCCCAGGATGGGTGGGCAGCCCGCCGCCGGCCGGGTCAGAAGTGTTTATCGGGCGGCTGCCCCAGGACGTGTACGAGCACCAGCTGATCCCACTATTCCAGCGCGTGGGCCGCCTCTACGAGTTCCGCCTGATGATGACCTTCAGCGGCCTGAACCGCGGCTTCGCTTACGCCCGCTACAGCTCGCGGCGCGGCGCCCAGGCCGCCATCGCCACGCTGCACAACCACCCGCTGCGGCCGTCCTGCCCGCTGCTCGTGTGCCGCAGCACCGAGAAGTGCGAGCTGAGTGTGGACGGGTTGCCGCCGGGCCTGAGCCGCCGCGCGCTGCTGCTCGCGCTGCAGCCGCTGGGTCCCGGCCTGCAGGAGGCGCTGCTGCTACCCAGCCCCGGGCCGGCGCCCGCGCAGATCGCATTGCTCAAGTTCAGCTCGCACCGCGCCGCAGCCATGGCCAAAAAGGCCCTGGTGGAAGGGCAGTCACGCCTCTGTGGAGAACAGGTGGCTGTGGAGTGGCTTAAGCCAGACCTGAAGCAGCGACTCCGCCAGCAGCTCACGGATCCCTCTCTACAGTGCCTACAGCCAGAGGGCAGCCAAGTAGCCCTGGCCAGGGACAAGGGGCTGGAGTCCCAAGGGGCTCGGGCTGCCCTGCAGCTGCTGTGCCAACGGATGAAGTTGGGCAGCCCATTGTTCCTCACCAAGTGTTTGGGCACAGGCTCTGCTGGCTGGCACCGATTCTGGTACCAGGTGGTGATCCCTGGGCATCCAGTGCCCTTCAGTGGCCTCATCTGGGTTGTGCTGGCCCCCAGTGGGCAGGATGGGCATGAGGTGGCCAAGGATGCTGTGTCTGCACGGCTGCTGGAGGCATTGAGTCTGGGGCCGGCCTCCTGCGGTCTGCTGGGGCTGAGGCAGGAGGTACCATGGTTCAGCAGTGACCTAATCCTCTCCCCAGGCAGCCTGAATGAGTAG

Related Sequences

bmy_07851T0 Protein

Length: 851 aa      View alignments
>bmy_07851T0
MADRATLEDLVRLQGERVRALKQQKAGAEQIEEEVAKLLKLKAQLGPDEGKQKFVLKTPKGTRDYSPRQMAVREKVFDVIISCFKRHGAEVIDTPVFELKETLTGKYGEDSKLIYDLKDQGGELLSLRYDLTVPFARYLAMNKLTNIKRYHIAKVYRRDNPAMTRGRYREFYQCVSMEAGWDFDIAGQFDPMIPDAECLKIMCEILSSLQIGDFLVKVNDRRILDGTFAVCGVPDSKFRTICSSVDKLDKVSWEEVKSEMVGEKGLAPEVADRIGDYVQQHGGVSLVEQLLQDPKLSQNKQALEGLGDLKLLFDYLTLFGIADKISFDLSLARGLDYYTGVIYEAVLLQPPAQAGEEPLGVGSVAAGGRYDGLVGMFDPKGRKVPCVGLSIGVERIFSTVEQRLEALEEKVRTTETQVLVASAQKKLLEERLKLISELWDAGIKAELLYKKNPKLLNQLQYCEEAGIPLVAIVGEQELKDGVIKLRSVASREELWCERVNPENKAALEAWVRETGIRLVQVNGQRKYGGPPPGWVGSPPPAGSEVFIGRLPQDVYEHQLIPLFQRVGRLYEFRLMMTFSGLNRGFAYARYSSRRGAQAAIATLHNHPLRPSCPLLVCRSTEKCELSVDGLPPGLSRRALLLALQPLGPGLQEALLLPSPGPAPAQIALLKFSSHRAAAMAKKALVEGQSRLCGEQVAVEWLKPDLKQRLRQQLTDPSLQCLQPEGSQVALARDKGLESQGARAALQLLCQRMKLGSPLFLTKCLGTGSAGWHRFWYQVVIPGHPVPFSGLIWVVLAPSGQDGHEVAKDAVSARLLEALSLGPASCGLLGLRQEVPWFSSDLILSPGSLNE*