Part of scaffold_336 (Scaffold)

For more information consult the page for scaffold_336 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

TMEM30A ENSTTRG00000007878 (Bottlenosed dolphin)

Gene Details

transmembrane protein 30A

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000007452, Bottlenosed dolphin)

Protein Percentage 98.23%
cDNA percentage 97.29%
Ka/Ks Ratio 0.07203 (Ka = 0.0077, Ks = 0.1064)

TMEM30A ENSBTAG00000005100 (Cow)

Gene Details

cell cycle control protein 50A

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000006718, Cow)

Protein Percentage 93.17%
cDNA percentage 92.95%
Ka/Ks Ratio 0.14464 (Ka = 0.0353, Ks = 0.2443)

TMEM30A  (Minke Whale)

Gene Details

transmembrane protein 30A

External Links

Gene match (Identifier: BACU002042, Minke Whale)

Protein Percentage 70.75%
cDNA percentage 76.76%
Ka/Ks Ratio 0.50333 (Ka = 0.2463, Ks = 0.4893)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 885 bp    Location:625026..662402   Strand:+
>bmy_07889
ATAAATTCTTTAGTGTGGAATCAGTTCAAAGGGATTGATTATACTGGCACGGACCCTGCCAGTCCCTGCAATAAATGTTTGTCTCCCAACGTGACGCCTTGTATTTGTACCATTAACTTCACACTGGAACAGTCATTTGAGGGCAATGTGTTTATGTATTATGGACTGTCTAATTTCTATCAAAACCATCGTCGTTACGTGAAATCTCGAGATGATAGTCAACTAAATGGAGATCCTAGTGCTTTACTTAATCCCAGTAAGGAATGTGAGCCTTATCGAAGAAATGAAGACAAACCAATTGCTCCTTGCGGAGCTATTGCCAACAGCATGTTTAATGATACACTAGATTTGTTTCTGGTTGGCAATGAATCTGATCCTACGCCTATTCCTTTGAAAAAGAAAGGCATTGCTTGGTGGACAGATAAAAATGTGAAATTCAGAAATCCTCCTGGAGCAGACATTCCCCTAGAAGAACGATTCAAAGGCACAACAAAGCCAGTAAACTGGGTTAAACCAGTATACATGCTGGATCCTGACGAAGATAATAGTGGGTTCATAAATGAGGATTTTATTGTTTGGATGCGTACTGCAGCATTACCTACTTTTCGTAAGTTGTATCGTCTTATAGAGAGGAAAAATGATTTACATCCAACATTACCAGCTGGACGATACTATTTGAATATCACGTACAATTACCCTGTACATTCATTTGATGGACGAAAACGGATGATCTTGAGCACTATTTCATGGATGGGAGGAAAAAATCCATTTTTGGGGATTGCTTACATCGCTATTGGATCCATCTCCTTCCTTCTGGGAGTTGTACTGCTAGTAATTAATCATAAATATAGAAACAGTAGTAATACTGCTGACATTACCATTTAA

Related Sequences

bmy_07889T0 Protein

Length: 295 aa      View alignments
>bmy_07889T0
INSLVWNQFKGIDYTGTDPASPCNKCLSPNVTPCICTINFTLEQSFEGNVFMYYGLSNFYQNHRRYVKSRDDSQLNGDPSALLNPSKECEPYRRNEDKPIAPCGAIANSMFNDTLDLFLVGNESDPTPIPLKKKGIAWWTDKNVKFRNPPGADIPLEERFKGTTKPVNWVKPVYMLDPDEDNSGFINEDFIVWMRTAALPTFRKLYRLIERKNDLHPTLPAGRYYLNITYNYPVHSFDGRKRMILSTISWMGGKNPFLGIAYIAIGSISFLLGVVLLVINHKYRNSSNTADITI*