Part of scaffold_325 (Scaffold)

For more information consult the page for scaffold_325 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

FAM71D ENSTTRG00000015797 (Bottlenosed dolphin)

Gene Details

family with sequence similarity 71, member D

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000014968, Bottlenosed dolphin)

Protein Percentage 91.38%
cDNA percentage 94.52%
Ka/Ks Ratio 0.58044 (Ka = 0.0475, Ks = 0.0818)

BT.54344 ENSBTAG00000010239 (Cow)

Gene Details

protein FAM71D

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000040913, Cow)

Protein Percentage 86.38%
cDNA percentage 89.37%
Ka/Ks Ratio 0.3935 (Ka = 0.0829, Ks = 0.2108)

FAM71D  (Minke Whale)

Gene Details

family with sequence similarity 71, member D

External Links

Gene match (Identifier: BACU020360, Minke Whale)

Protein Percentage 96.4%
cDNA percentage 98.2%
Ka/Ks Ratio 0.82947 (Ka = 0.0159, Ks = 0.0191)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 1179 bp    Location:810725..818259   Strand:+
>bmy_07899
ATGAGCACAATGAAGAAGAATAACAGGAAGTCTACTACGAGGATCGACGAGCAAGATGACATCTGTGTCCCAGACTCCAAGGATCCAGGAGAGCTTCAAAATATGTTGGATGAAGGAGAGTATGCCCCTTTTGTATCTCCTCCGATATTAGAGAGCAATTTTATCCAGGTCAACAGAAGAGGTAAATCCATTTACCTTCATAACCGAGCCAACTGGGTGACTGTAGGCATATGCTCTTCCAGTCCCACCCTCAAGACCCCCAACGTGATGCTGTTGGCACATCTGACACCCGCCGCCCAGAAAGATTCAGAACCCCTTTTTAAAAGTCTTCTGACATCTCCTTCTCCAGAGAATCTGGTGCTCACCAGGTTTCTCCCTCTGCAGTTTGTGACTCTTTCTGTGCATGATGCTGAGAATATGCGCATCAAAGTAAAGCTGGTGAGTGGCCGAGCCTACTACCTACAGCTCTGTGCTCCTGCATGCAAACAAGACACCCTATTCTGTCAGTGGGTGGAACTCATCTCCCTCTTGAATGAGGAGAAAGCCAAAGCTTCCAAAGTGTCGGAAGTCTCCAGCCTCTCAGAAATCACAAACAGCACAGACATCACAGGGTCAATGGACATCATGGATATTGCAGCCTTCACAGCTGTACAGACCCCACACCTGTACACATGTTCAAACCCCATCAATGACATAGGAAGCATTGATTTCTCAGAATTCACGGACATCACGGATGTCACCGATGTCACGGATATTCCAGAAAATGAGGTCACCGAGGCCCCAGATATAAGAATTGTCACAGAAGTCACAGAAGTCATGGACATCTGCAATGTCACAGTGGGCTCAGGGGTCACAGTGGTGTTTGAAAATGATGACATACTCAGGGCCAAGCGGGAGGAAAAGGAAAAAATGGAAAATATTCTGAAGCCTGGCTGTCAACRAGATACAAAAATTAAGAATGAGTTTAGAGTATCCTCAAAACATGTCACCATCTCAAACCTAATGCTGACTTTCGAAGGTGAAAGATGTTTTCAGACTACCTTGACTCCAGAAGAAGGTGAGACAAATAAATCCAAAGAGATGAGTGATAGACCCTCTGAAATAAGGACAACAGACTCTAAAAGCACGGCTCTCAAGGCTGAAGAATCYAGGTATGTGAGGCAGGGAAATGCCAAGTGA

Related Sequences

bmy_07899T0 Protein

Length: 393 aa      View alignments
>bmy_07899T0
MSTMKKNNRKSTTRIDEQDDICVPDSKDPGELQNMLDEGEYAPFVSPPILESNFIQVNRRGKSIYLHNRANWVTVGICSSSPTLKTPNVMLLAHLTPAAQKDSEPLFKSLLTSPSPENLVLTRFLPLQFVTLSVHDAENMRIKVKLVSGRAYYLQLCAPACKQDTLFCQWVELISLLNEEKAKASKVSEVSSLSEITNSTDITGSMDIMDIAAFTAVQTPHLYTCSNPINDIGSIDFSEFTDITDVTDVTDIPENEVTEAPDIRIVTEVTEVMDICNVTVGSGVTVVFENDDILRAKREEKEKMENILKPGCQXDTKIKNEFRVSSKHVTISNLMLTFEGERCFQTTLTPEEGETNKSKEMSDRPSEIRTTDSKSTALKAEESRYVRQGNAK*