Part of scaffold_325 (Scaffold)

For more information consult the page for scaffold_325 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

ATP6V1D ENSTTRG00000015805 (Bottlenosed dolphin)

Gene Details

ATPase, H+ transporting, lysosomal 34kDa, V1 subunit D

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000014976, Bottlenosed dolphin)

Protein Percentage 98.7%
cDNA percentage 98.41%
Ka/Ks Ratio 0.19562 (Ka = 0.0083, Ks = 0.0423)

ATP6V1D ENSBTAG00000016309 (Cow)

Gene Details

V-type proton ATPase subunit D

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000021699, Cow)

Protein Percentage 98.79%
cDNA percentage 96.36%
Ka/Ks Ratio 0.04214 (Ka = 0.0056, Ks = 0.1338)

ATP6V1D  (Minke Whale)

Gene Details

ATPase, H+ transporting, lysosomal 34kDa, V1 subunit D

External Links

Gene match (Identifier: BACU010748, Minke Whale)

Protein Percentage 100.0%
cDNA percentage 99.33%
Ka/Ks Ratio 0.001 (Ka = 0.0, Ks = 0.0198)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 918 bp    Location:963935..949380   Strand:-
>bmy_07902
CCACCCCTACCGACAGGAAGCGGAAGTGAAGAAGGCGTAGCCTGGCTGCCTCTTAGCAACGCCGGGGGTCACGTGACACAACCAGCTGACTCAGGTGGCGCAAGCCTCAGTGGCTGGGCTTGTTGCAGCCGCGATTGCCCGGCCAGGGACCCGGGCCGAACAGTCATTGTCAGAATGTCGGGCAAAGACCGAATTGAAATCTTTCCCTCGCGAATGGCACAGACCATCATGAGGGCTCGGTTAAAAGGAGCACAGACGGGTCGAAACCTCCTAAAGAAAAAATCTGACGCCTTAACTCTTCGATTTCGACAGATCCTTAAGAAGATAATAGAGACTAAAATGTTGATGGGTGAAGTGATGAGAGAAGCTGCCTTTTCACTTGCTGAGGCCAAGTTCACAGCAGGGGACTTCAGCACCACAGTAATCCAAAATGTAAATAAAGCCCAAGTGAAGATTAGAGCAAAGAAAGATAATGTAGCAGGTGTTACTTTGCCAGTATTTGAACATTACCATGAAGGAACTGACAGTTATGAACTGACTGGTTTAGCCAGAGGTGGCGAACAGTTGGCTAAACTGAAGAGGAATTATGCCAAAGCAGTGGAACTACTGGTGGAACTAGCTTCGCTGCAGACTTCCTTTGTTACTTTGGATGAAGCTATTAAGATAACCAACAGGCGTGTAAATGCCATTGAACATGTCATCATTCCCCGGATTGAACGTACCCTTGCTTATATCATCACAGAGCTGGATGAGAGAGAGAGAGAAGAGTTCTATAGGTTAAAGAAAATACAGGAGAAGAAAAAGATTCTCAAGGAAAAGTCTGAGAAGGACTTGGAACAACGGAGGGCAGCTGGAGAGGTGATGGAGCCTGCTAATCTTCTGGCTGAAGAGAAGGATGAGGATCTTCTCTTTGAATAA

Related Sequences

bmy_07902T0 Protein

Length: 306 aa      View alignments
>bmy_07902T0
PPLPTGSGSEEGVAWLPLSNAGGHVTQPADSGGASLSGWACCSRDCPARDPGRTVIVRMSGKDRIEIFPSRMAQTIMRARLKGAQTGRNLLKKKSDALTLRFRQILKKIIETKMLMGEVMREAAFSLAEAKFTAGDFSTTVIQNVNKAQVKIRAKKDNVAGVTLPVFEHYHEGTDSYELTGLARGGEQLAKLKRNYAKAVELLVELASLQTSFVTLDEAIKITNRRVNAIEHVIIPRIERTLAYIITELDEREREEFYRLKKIQEKKKILKEKSEKDLEQRRAAGEVMEPANLLAEEKDEDLLFE*