Sequence detailsbmy_07914 (Coding sequence)

Part of scaffold_339 (SequenceType object (1))

For more information consult the page for scaffold_339 (SequenceType object (1))

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

TRPC6ENSTTRG00000001858 (Bottlenosed dolphin)

Gene Details

transient receptor potential cation channel, subfamily C, member 6

External Links

Gene match(Ensembl Protein ID:ENSTTRP00000001748, Bottlenosed dolphin)

Protein Percentage 96.57%
cDNA percentage 96.32%
Ka/Ks Ratio 0.14196 (Ka = 0.0045, Ks = 0.0316)

BT.30924ENSBTAG00000011227 (Cow)

Gene Details

Short transient receptor potential channel 6

External Links

Gene match(Ensembl Protein ID:ENSBTAP00000053428, Cow)

Protein Percentage 98.12%
cDNA percentage 95.8%
Ka/Ks Ratio 0.07179 (Ka = 0.0097, Ks = 0.1355)

TRPC6 (Minke Whale)

Gene Details

transient receptor potential cation channel, subfamily C, member 6

External Links

Gene match (Identifier: BACU014490, Minke Whale)

Protein Percentage 95.41%
cDNA percentage 96.03%
Ka/Ks Ratio 0.56548 (Ka = 0.0349, Ks = 0.0618)

Additional orthologs identified in other species via the OPTIC pipeline.

TRPC6 (Human)   Trpc6 (Mouse)  

Genome Location

Sequence SequenceType object (2)

Length: 2835 bp    Location:261669..148375   Strand:-
Raw sequence 
>bmy_07914
ATGAACCAGAGCTCAGCGTTCGGGCCCGGGAGGGGAGGCTCTCCCGGGGTGGCTACCCCAGCCCGCGCGCGGCGCAACGAGAGCCAAGACTATCTGCTCATGGACTCGGAGCTGGGAGACGACGGCTGTCCGCAGCCCCCCCTGCCTCCCTACGGCTACTACCCTTGCTTGCCAGGCCACCTTTTCCTTACTCTAAATGTACAAGTAGAAAGTGGAGTAAAGAAGCAGAGTCACGAGCAGCAGAAATCTGGCCAGATGCCTGGCCAGATGCTGCAGTTCTGCCGGGGCACCGACAATAGACTGACCCACCGGCGGCAGACAGTTCTCCGTGAGAAGGGAAGAAGGTTAGCTAACCGAGGACCAGCATACATGTTTAATGATCACTCAACAAACCTATCTATTGAGGAGGAACGCTTTTTAGATGCAGCTGAATATGGCAACATCCCAGTGGTAAGGAAGATGTTAGAAGAATGCCTCTCACTCAATGTTAACTGTGTAGATTACATGGGCCAGAATGCCCTGCAGCTGGCAGTGGCCAATGAACATCTGGAAATTACAGAACTTCTTCTCAAGAAAGAAAATTTGTCTCGTGTTGGGGATGCCTTACTTTTAGCTATTAGTAAAGGTTATGTTCGGATTGTGGAAGCCATTCTCAGTCATCCAGCTTTTGCTGAAGGCAAGCAGTTAGCAACCAGCCCCAGTCAGTCTGAACTCCAGCAAGACGATTTTTATGCCTATGATGAAGATGGAACACGGTTCTCCCATGATGTGACTCCAATCGTTCTGGCTGCCCACTGCCAGGAATATGAAATTGTGCACACCCTCTTGCGGAAGGGTGCTCGGATTGAACGGCCTCATGACTATTTCTGCAAGTGCAGCGAATGCAACCAGAAACAGAAGCATGACTCCTTCAGCCATTCCAGATCTAGAATTAATGCCTACAAAGGCCTGGCAAGCCCAGCTTACCTGTCATTGTCTAGTGAAGATCCAGTCATGACAGCTTTAGAGCTTAGCAATGAGCTGGCAGTGCTGGCCAACATTGAGAAAGAGTTCAAGAATGACTACAAAAAACTGTCAATGCAGTGCAAAGATTTTGTTGTTGGACTCCTCGATCTGTGCAGAAATACCGAAGAAGTAGAGGCCATTCTGAACGGGGATGTTGAAATACACCACAGTGGTGGAGATCATGGTCGTCCAAATCTCAGCCGTTTAAAACTTGCCATTAAATATGACGTAAAAAAATTTGTAGCTCATCCAAACTGCCAACAGCAGCTTTTGTCCATATGGTATGAGAACCTTTCCGGTTTGCGGCAGCAGACCATGGCAGTCAAGTTTCTTGTGGTCGTCGCCGTTGCCATCGGACTGCCTTTCCTGGCTCTCATTTACTGGTTTGCTCCATGCAGCAAGATGGGGAAGATAATGCGTGGCCCATTCATGAAGTTTGTAGCACATGCAGCCTCCTTCACCATTTTTCTGGGACTACTAGTCATGAATGCAGCTGACAGATTTGAAGGCACCAAACTCCTTCCTAATGAAACCAGCACAGATAATGCAAAACAGCTGTTCAGGATGAAAACCTCCTGCTTCTCATGGATGGAGATGCTCATTATTTCCTGGGTAATAGGCATGATATGGACTGAATGTAAAGAAATTTGGACTCAAGGCCCCAAGGAGTACTTGTTTGAGTTGTGGAATATGCTTGATTTTGGAATGTTGGCAATCTTTGCGGCATCATTCATTGCAAGATTCATGGCATTTTGGCATGCTTCCAAAGCCCAGAGCATCATTGATGCAAATGATACTTTGAAGGATTTGACAAAAGTCACATTGGGAGACAATGTGAAATACTACAATTTGGCCAGGATAAAGTGGGACCCCTCTGATCCTCAAATTATATCTGAAGGTCTTTATGCAATTGCTGTAGTTTTAAGTTTCTCCAGAATAGCCTACATTTTACCAGCAAATGAAAGCTTTGGACCTCTGCAGATATCACTTGGAAGAACAGTGAAAGACATCTTCAAGTTCATGGTCATATTCATCATGGTGTTTGTGGCCTTTATGATTGGAATGTTCAACCTCTATTCCTACTACATTGGTGCAAAGCAAAACGAAGCCTTCACAACAGTGGAAGAGAGTTTTAAGACACTGTTTTGGGCTATATTTGGACTTTCTGAAGTGAAATCAGTGGTCATCAACTATAATCACAAATTCATTGAAAACATCGGTTATGTTCTTTATGGAGTCTATAATGTTACCATGGTCATCGTTTTGCTAAATATGTTAATTGCAATGATCAACAGTTCATTCCAGGAAATTGAGGATGATGCTGATGTGGAGTGGAAATTTGCAAGGGCCAAACTTTGGTTTTCCTACTTTGAGGAGGGAAGAACTCTTCCTGTTCCCTTCAACCTGGTGCCAAGTCCAAAGTCCCTGTTTTATCTCCTACTGAGGCTTAAAAAATGGATTTCTGAGCTGTTCCAGGGCCATAAAAAAGGTTTCCAGGAGGATGTGGAAATGAACAAGTTTGGACATAGTAAACAATCAAGTTTAAGAAGTTCAGAAGATTTCCAGTTAAACAGTTTCAATAATCCTCCAAGACAATATCAGAAAATAATGAAGAGGCTCATTAAAAGATATGTATTACAAGCCCAGATAGATAAGGAGAGTGATGAAGTGAACGAAGGGGAACTGAAGGAAATTAAACAGGACATCTCAAGTCTCCGCTATGAACTCCTTGAAGAAAAAACTCAAAATTCAGAAGACCTGGCAGAACTTATTAGAAAACTTGGGGAGAAATTATCAATGAAACCAAATCAAGAGGAAAGCAATAGATAA

Related Sequences

bmy_07914T0 SequenceType object (3)

Length: 945 aa      View alignments
>bmy_07914T0
MNQSSAFGPGRGGSPGVATPARARRNESQDYLLMDSELGDDGCPQPPLPPYGYYPCLPGHLFLTLNVQVESGVKKQSHEQQKSGQMPGQMLQFCRGTDNRLTHRRQTVLREKGRRLANRGPAYMFNDHSTNLSIEEERFLDAAEYGNIPVVRKMLEECLSLNVNCVDYMGQNALQLAVANEHLEITELLLKKENLSRVGDALLLAISKGYVRIVEAILSHPAFAEGKQLATSPSQSELQQDDFYAYDEDGTRFSHDVTPIVLAAHCQEYEIVHTLLRKGARIERPHDYFCKCSECNQKQKHDSFSHSRSRINAYKGLASPAYLSLSSEDPVMTALELSNELAVLANIEKEFKNDYKKLSMQCKDFVVGLLDLCRNTEEVEAILNGDVEIHHSGGDHGRPNLSRLKLAIKYDVKKFVAHPNCQQQLLSIWYENLSGLRQQTMAVKFLVVVAVAIGLPFLALIYWFAPCSKMGKIMRGPFMKFVAHAASFTIFLGLLVMNAADRFEGTKLLPNETSTDNAKQLFRMKTSCFSWMEMLIISWVIGMIWTECKEIWTQGPKEYLFELWNMLDFGMLAIFAASFIARFMAFWHASKAQSIIDANDTLKDLTKVTLGDNVKYYNLARIKWDPSDPQIISEGLYAIAVVLSFSRIAYILPANESFGPLQISLGRTVKDIFKFMVIFIMVFVAFMIGMFNLYSYYIGAKQNEAFTTVEESFKTLFWAIFGLSEVKSVVINYNHKFIENIGYVLYGVYNVTMVIVLLNMLIAMINSSFQEIEDDADVEWKFARAKLWFSYFEEGRTLPVPFNLVPSPKSLFYLLLRLKKWISELFQGHKKGFQEDVEMNKFGHSKQSSLRSSEDFQLNSFNNPPRQYQKIMKRLIKRYVLQAQIDKESDEVNEGELKEIKQDISSLRYELLEEKTQNSEDLAELIRKLGEKLSMKPNQEESNR*