Part of scaffold_339 (Scaffold)

For more information consult the page for scaffold_339 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

MMP7 ENSBTAG00000004594 (Cow)

Gene Details

matrilysin precursor

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000006029, Cow)

Protein Percentage 73.41%
cDNA percentage 82.27%
Ka/Ks Ratio 0.56345 (Ka = 0.1742, Ks = 0.3092)

MMP7  (Minke Whale)

Gene Details

matrix metallopeptidase 7 (matrilysin, uterine)

External Links

Gene match (Identifier: BACU014497, Minke Whale)

Protein Percentage 92.27%
cDNA percentage 95.3%
Ka/Ks Ratio 0.74032 (Ka = 0.0449, Ks = 0.0607)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 840 bp    Location:1217893..1207145   Strand:-
>bmy_07926
ATGCAGCTGGCTGTGCTGGCTGTGCTGTACGCTGTGAGTGTGCTGCCTGGCACCCTGGCCCTGCAGCTTCCCCGGAAGGCAGGAGGCATGAGTGAGCCGCCGTGGGAACAAGCTCAGGACTATCTGAAGAGATTTTATCCATCTGACTCAAGATCAAGGGACCCCAATAGTTTAGAAGTCGAACTCAAGCAGATGCAAAAATTCTTTCGCCTGCCTATAACTGGAACATTAAGCTCCCATACTATAGAAATCATGCGGAAGCCCAGATGTGGAGTGCCAGATGTTGCAGAATATTCCCTATTCCCAGATCGCCCAAAATGGACTTCCAAAGTAGTCACCTACAGGATCGTGTCATATACTCGAGACTTACCACATGTCATAGTGAATCAATTAGTGGCAAAGGCCTTCAACGTGTGGAGCAAAGAGATCCCACTGAGCTTCAAGAGAGTTAGTTGGGGAATTGCTGATATCATGATTGGCTTTGCAAGAGGAGCTCACGGGGACCCCAACCCATTTGATGGGCCAGGAAACACACTGGCCCATGCCTTTGCACCTAGGCCAGGCCTGGGAGGAGATGCTCACTTTGATGAGGATGAACGCTGGACTGATGGTAGCAGTATAGGAATTAACTTCCTGTATGCGGCAACTCATGAACTTGGCCATTCCTTGGGTCTGGATCATTCATCTGATCCTAATGCTGTGATGTATCCAACTTATGGAGAAGGCGATTCCAAGAATTTCAAACTTTCACAGGATGATATCAATGGAATTCAGAAATTATATGGTAATATTTATGATTTCCGTATTTCCAATGTCTCCTTAAGACATTGCCTCCTTTGG

Related Sequences

bmy_07926T0 Protein

Length: 280 aa      View alignments
>bmy_07926T0
MQLAVLAVLYAVSVLPGTLALQLPRKAGGMSEPPWEQAQDYLKRFYPSDSRSRDPNSLEVELKQMQKFFRLPITGTLSSHTIEIMRKPRCGVPDVAEYSLFPDRPKWTSKVVTYRIVSYTRDLPHVIVNQLVAKAFNVWSKEIPLSFKRVSWGIADIMIGFARGAHGDPNPFDGPGNTLAHAFAPRPGLGGDAHFDEDERWTDGSSIGINFLYAATHELGHSLGLDHSSDPNAVMYPTYGEGDSKNFKLSQDDINGIQKLYGNIYDFRISNVSLRHCLLW