Part of scaffold_348 (Scaffold)

For more information consult the page for scaffold_348 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

HNRNPF ENSBTAG00000008853 (Cow)

Gene Details

Heterogeneous nuclear ribonucleoprotein F Heterogeneous nuclear ribonucleoprotein F, N-terminally processed

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000011658, Cow)

Protein Percentage 98.55%
cDNA percentage 95.17%
Ka/Ks Ratio 0.0355 (Ka = 0.0067, Ks = 0.1898)

HNRNPF  (Minke Whale)

Gene Details

heterogeneous nuclear ribonucleoprotein F

External Links

Gene match (Identifier: BACU003404, Minke Whale)

Protein Percentage 99.76%
cDNA percentage 99.44%
Ka/Ks Ratio 0.06431 (Ka = 0.0011, Ks = 0.0176)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 1248 bp    Location:597625..607683   Strand:+
>bmy_07932
ATGATGTTGGGCCCCGAGGGAGGTGAAGGCTTTGTAGTCAAGCTCCGTGGCCTGCCCTGGTCCTGCTCTGTTGAGGATGTGCAGAATTTCCTCTCCGACTGCACAATTCATGATGGGGTCGCAGGCGTTCATTTTATCTACACTAGAGAAGGCAGGCAGAGTGGTGAGGCTTTTGTTGAACTTGAATCAGAAGATGATGTAAAAATGGCCCTTAAAAAAGACAGGGAAAGCATGGGACATCGGTACATTGAGGTGTTCAAGTCCCACAGAACCGAGATGGATTGGGTGTTGAAGCACAGTGGTCCAAACAGTGCTGACACCGCCAATGATGGCTTCGTGCGACTTCGAGGACTCCCGTTTGGATGCACCAAGGAAGAAATCATTCAGTTCTTCTCAGGGTTGGAAATCGTGCCAAACGGGATCACATTGCCTGTGGACCCCGAGGGCAAGATTACAGGGGAAGCCTTTGTGCAGTTTGCCTCACAGGAGTTAGCTGAGAAGGCCCTAGGGAAGCACAAGGAGAGAATAGGGCACAGGTATATTGAGGTGTTCAAGAGCAGTCAGGAAGAAGTTAGGTCATACTCGGATCCCCCTCTGAAGTTCATGTCAGTGCAGCGGCCGGGGCCCTATGACCGGCCTGGCACAGCCAGGAGGTATATTGGCATTGTCAAGCAGGCGGGCCTGGAGAGGATGAGGTCCGGTGCCTACAGTGCAGGCTACGGGGGCTATGAGGAGTACAGTGGCCTCAGCGATGGCTACGGCTTCACCACCGACCTGTTTGGAAGAGACCTCAGTTACTGTCTCTCTGGGATGTATGACCAAAGGTATGGAGATGGCGAGTTCACTGTCCAGAGCACCACTGGACACTGCGTCCACATGAGGGGGCTGCCCTACAAAGCCACGGAGAACGACATTTACAACTTCTTCTCTCCACTCAACCCAGTGAGAGTCCATATTGAGATTGGCCCTGATGGAAGAGTGACCGGCGAAGCTGATGTCGAATTTGCCACTCACGAAGAAGCTGTGGCGGCCATGTCCAAAGACAGGGCCAACATGCAACACAGATACATAGAACTTTTCTTGAATTCCACGACAGGGTCCAGCAACGGGGCATATAGCAGCCAGATGATGCAAGGCATAGGGGTGTCAACCCCGTCCACTTACAGTGGCCTTGAGAGCCAGTCCGTGAGTGGCTGTTATGGGGCGGCTAGCTATGGTGGCCAGAACAGCATGGGTGGATATGACTAG

Related Sequences

bmy_07932T0 Protein

Length: 416 aa     
>bmy_07932T0
MMLGPEGGEGFVVKLRGLPWSCSVEDVQNFLSDCTIHDGVAGVHFIYTREGRQSGEAFVELESEDDVKMALKKDRESMGHRYIEVFKSHRTEMDWVLKHSGPNSADTANDGFVRLRGLPFGCTKEEIIQFFSGLEIVPNGITLPVDPEGKITGEAFVQFASQELAEKALGKHKERIGHRYIEVFKSSQEEVRSYSDPPLKFMSVQRPGPYDRPGTARRYIGIVKQAGLERMRSGAYSAGYGGYEEYSGLSDGYGFTTDLFGRDLSYCLSGMYDQRYGDGEFTVQSTTGHCVHMRGLPYKATENDIYNFFSPLNPVRVHIEIGPDGRVTGEADVEFATHEEAVAAMSKDRANMQHRYIELFLNSTTGSSNGAYSSQMMQGIGVSTPSTYSGLESQSVSGCYGAASYGGQNSMGGYD*