Part of scaffold_348 (Scaffold)

For more information consult the page for scaffold_348 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

RET ENSTTRG00000001614 (Bottlenosed dolphin)

Gene Details

ret proto-oncogene

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000001522, Bottlenosed dolphin)

Protein Percentage 95.06%
cDNA percentage 95.46%
Ka/Ks Ratio 0.18182 (Ka = 0.027, Ks = 0.1485)

RET ENSBTAG00000000570 (Cow)

Gene Details

proto-oncogene tyrosine-protein kinase receptor Ret precursor

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000000744, Cow)

Protein Percentage 90.25%
cDNA percentage 90.92%
Ka/Ks Ratio 0.13359 (Ka = 0.0508, Ks = 0.3805)

RET  (Minke Whale)

Gene Details

ret proto-oncogene

External Links

Gene match (Identifier: BACU003399, Minke Whale)

Protein Percentage 91.27%
cDNA percentage 92.9%
Ka/Ks Ratio 0.31285 (Ka = 0.0556, Ks = 0.1778)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 2331 bp    Location:946961..915945   Strand:-
>bmy_07937
ATGCCCCTGCTCTACGTCCACGCCCTGCAAGACGTCCCCGAGGAGGTGCCCAGCTTCCGCCTGGGCCAGCACCTCTACGGCGCCTACCGCACGAGGCTGCACGAGAACGACTGGGTCCGTATCCAGGAGGACACGGGGCTTCTCTACCTTAACCGGAGCCTGGACCACAGCTCCTGGGAGAAGCTCAGCATCCGCAACGGTGGCTTCCCGCTGCTCACCGTCTACCTCCAGGTCTTCCTGTCGCCCGCGTCCCTTCGTGAGGGCGAGTGCCAGTGGCCGGGCTGTGCCCGAGTGTACTTCTCCATCATCAACGCCTCCTTCCCGGCTTGTGGTGCCCTCAAACCCCGGGAGCTCTGCTTCCCCGAGACGGGCCTGTCCTTCCGCATTCGGGAGAACAGGCCTCCCGGCACCTTCCACCAGTTCCGCCTGCTGCCTGTGCAGTTCCTCTGCCCCAACGTCAGCGTGGCCTACAGGCTTCTGGGAGGTGAGGGTCTGCCCTTCCGCTGCGCTGTGGACAGCCTGGAGGTGAGCACGCGCCGGGCCCTTGACCGCGAGCAGCGGGAGAAGTATGAGCTGGTGGCTACGTGCGCGGTGCGCGTCGGCGCGCGTGAGGAGGAGGTGATGGTGCCCTTCCCCGTGACCGTGTACGACGAAGACGACTCTGCGCCCAGCTTCCTCGGGGGCGTCGACACCGCCAGCGCCGTCGTGGAGTTCAAGCGGAAGGAGGGCACTGTTGTGGCCACACTACGTGTCTTCGATGCAGATGTGGTGCCAGCATCCGGGGAGCTCCTGAGACGGTACACAAGCACGCTGCTCTCCGGGGATGCCTGGGCCCTCCAGACCTTCCGAGTAGAGCACTCGCCCAACGAGACCTTGGCCCAGGCCAACGGCAGCTTTGTGCGGGCAACCGTGCATGACTACAGGCTGGTTCTCAACCGGAGCCTCCCCATCTCGGAGAGCCGGGCCATGCAGCTGGCCGTGCTGGTCAACGACTCGGACTTCCAGGGCCCGGGGGAGGGCATCCTCCTCCTCCACTTCAACGTGTCCGTGCTGCCCGTCAGCCTGCGCCTGCCCAGCACCTACTCCTTTGCCGCGAGCAGGCGGGCCCGCCGCTTCGCCCAGGTRAGCCCCCAGCCTGCTGCCTGCCTGGGGTGGGGTTTGGAGGGGCAGGAGACCCCCAGGATTGGGAAAGTCTGTGTGGAAAACTGCCAGGAGTTCAGTGGCATCCACGTGCAGTACAAGCTGCAGCTCTCCAGCGCCAACTGCAGCGCCCTGGGGATGGTCACCTCGGCCGAGGACACCACAGGGACCCTGTTCGTGAATGACACGGAGGCCCTGCAGCGGCCCGAGTGTGCCCAACTCCAGTACACGGTAGTGGCCGTCGAACGGCCAACCCGCCGGCAAGCCCAGGCCCCACTGGTCGTCACACTGGAGGGGACATATGTGGCAGAGGAGCCAGGCTGCCCCCTGTCCTGCGCRGTCAGCAAGAGGCGGCCCGAGTGTGAGGAATGCGGCGGCCTGGGCTCTCTGACGGGCAGGTGCGAGTGGAGACAGGGAGACGGCAAAGGGATCACCAGGAACTTCTCCACCTGCTCCCCCAGCATCAAGACCTGCCCCGATGGACACTGTGACGCCGTGGAAAGCAGAGACGCCAACATCTGCCCCCAGGACTGCCTCCGTAAGCACCGAGCCTGCACGTGGGGCGGCAGCATCATTGGTGGGCACGAGCCTGGGGAACGCCGGGGGATTAAAGCCGGCTTCGGTATCTGCAACTGCTTCCCGGAGGAGAAGAAGTGCTTCTGCGAGCCGGAAGACAGCCAGGAGAACGCCTCGGCGAGCGAGCTGCGGGACCTGCTGTCAGAGTTCAACCTCCTGACGCAGGTCAGCCACCCGCAAGTCATCAAGCTATACGGGGCCTGCAGCCAGGACGCCCCTCTCCTGCAGCCTCCCTGTGACAGACTGGACAGGGCCAGCTCACAGGGTCGGATCCCAGTCAAGTGGATGGCCATTGAGTCCCTCTTCGATCACATCTACACCACCCAGAGTGACGTGTACAGTCTGATGCTGCAGTGCTGGAAGGAGGAGCCAGACAAGAGGCCAGTGTTTGCCGACATCAGCAAAGACTTGGATAAGATGATGGTTAAGAGCAGAGACTACTTGGACCTGGCCGCGTCCACCCCATCCGATTCCCTGCTGTACGACGACGGCCTGTCGGAGGAGGAGATGCCCCTGGTGGACTGTAATAACGCTCCCCTCCCTCGAACCCTCCCCTCCACGTGGATTGAAAACAAACTCTATGGTAGAATTTCACATGCATTTACTAGATTCTAG

Related Sequences

bmy_07937T0 Protein

Length: 777 aa      View alignments
>bmy_07937T0
MPLLYVHALQDVPEEVPSFRLGQHLYGAYRTRLHENDWVRIQEDTGLLYLNRSLDHSSWEKLSIRNGGFPLLTVYLQVFLSPASLREGECQWPGCARVYFSIINASFPACGALKPRELCFPETGLSFRIRENRPPGTFHQFRLLPVQFLCPNVSVAYRLLGGEGLPFRCAVDSLEVSTRRALDREQREKYELVATCAVRVGAREEEVMVPFPVTVYDEDDSAPSFLGGVDTASAVVEFKRKEGTVVATLRVFDADVVPASGELLRRYTSTLLSGDAWALQTFRVEHSPNETLAQANGSFVRATVHDYRLVLNRSLPISESRAMQLAVLVNDSDFQGPGEGILLLHFNVSVLPVSLRLPSTYSFAASRRARRFAQVSPQPAACLGWGLEGQETPRIGKVCVENCQEFSGIHVQYKLQLSSANCSALGMVTSAEDTTGTLFVNDTEALQRPECAQLQYTVVAVERPTRRQAQAPLVVTLEGTYVAEEPGCPLSCAVSKRRPECEECGGLGSLTGRCEWRQGDGKGITRNFSTCSPSIKTCPDGHCDAVESRDANICPQDCLRKHRACTWGGSIIGGHEPGERRGIKAGFGICNCFPEEKKCFCEPEDSQENASASELRDLLSEFNLLTQVSHPQVIKLYGACSQDAPLLQPPCDRLDRASSQGRIPVKWMAIESLFDHIYTTQSDVYSLMLQCWKEEPDKRPVFADISKDLDKMMVKSRDYLDLAASTPSDSLLYDDGLSEEEMPLVDCNNAPLPRTLPSTWIENKLYGRISHAFTRF*