Part of scaffold_329 (Scaffold)

For more information consult the page for scaffold_329 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

PTPRB ENSTTRG00000004840 (Bottlenosed dolphin)

Gene Details

protein tyrosine phosphatase, receptor type, B

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000004563, Bottlenosed dolphin)

Protein Percentage 92.46%
cDNA percentage 92.2%
Ka/Ks Ratio 0.23418 (Ka = 0.0172, Ks = 0.0732)

PTPRB ENSBTAG00000015296 (Cow)

Gene Details

Uncharacterized protein

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000020345, Cow)

Protein Percentage 92.79%
cDNA percentage 92.49%
Ka/Ks Ratio 0.22273 (Ka = 0.0426, Ks = 0.1913)

PTPRB  (Minke Whale)

Gene Details

protein tyrosine phosphatase, receptor type, B

External Links

Gene match (Identifier: BACU016427, Minke Whale)

Protein Percentage 95.2%
cDNA percentage 95.79%
Ka/Ks Ratio 0.53155 (Ka = 0.0361, Ks = 0.0679)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 6033 bp    Location:199594..276706   Strand:+
>bmy_07953
ATGCATCTGGATTACAGCAAGGTAAGCGTGTATCTGCAAAATTCTTCAAGCCGCCTTCTCTTTTTTGTTTTTTGCTCTGCAGATCCTTTACCTCCTGCTAGGTTTGAAGTCAATAAAGAGAAAAGTACTTCCACCAGTTTGCATGTCTGGTGGACTCCTTCTTCCGGGAAAGTCACCTGGTATGAGGTGCAGTTACTTGATGATAACCAAAAGACACAGGGGGCCCAAATTCAAGAAAGAACTTCACGGAATGAATATACATTTTTAAACCTCACTGCTGGTAGTAAATACAAAATTGCCATCACAGCTGTTTCTGGGGATAAACGTTCCTCTACGATTTATGCCAATGGATCAACAGTGCCATCGCCAGTGAAAGATATTGGTATTTCAGCGAAAACGAATTCTCTCCTGATTTCCTGGTCACGTGGCTCTGGGAACGTGGAAAGATACCAGCTGATACTAATGGATAAAGGAATTCTAGTTCATAGTTATGCCGTGGACAAATCTACTACTTCCTATGCTTTTCATGGACTGATACCTGGTCACCTCTATAATGTCACCATTGTTACCGAGGCTGCAGGGCTGCAAAACTACAGATGGAAACCAGCCAGGACAACCCCCATGGAAGTCTCAAATCTGAAGGTGACAAATGATGGCACTTTGACCTCTCTAAAAGTCAAGTGGCAAAGACCTTCTGGAAATGTGGATTTCTACAACATTACACTGTCTCACCAAGGGACCATCAAAGAATCCAGAATATTAGCACCCCAGATTACTGAAACTCAATTTAAAGACTTAGCCCCTGGACGACTTTATCAAGTCACCATCAGCTGTGTCTCTGGTGAATTGTCTGCTCATAAGATGGCAGTGGGCAGAACAGTTCCAGAGGAAGTTGGGGACCTGGAGGCAAACAGCAATGGTTCTACAAGGTCCCTGGTAGTGAGCTGGTCGCCCCCTGCTGGAGACTGGGAGCAGTATCGTATCCTGCTTTTGAATGATTCTTTGGTGCTGCTCAACATCACCGTGGGAAAGGAGGAAACACACTATGTCATAGGTGATGTGGGGCTCATACCGGGAAGACAGTATGAGGTCGAAGTCACTGTTGAGAGCGGCAATCTGAAGAATTCTAAGCGTTGCCATGGCAGGACAGTGCCCCTGGCTGTCCTTCAGCTTCGTGTCAAACACGCCAATGAAACCTCACTGGGTGTCATGTGGCAGACCCCTGCAGCAGAATGGGAGAAATACATCATTTCACTAATTGACAGAGACCTCTTACTCATCCACAAGTTGCTCCCCAAAGATGCCAAAGAATTCACTTTTACTGACCTGGTGCCTGGACGAAAATACATAGCTACAGTCAGCAGTATTAGTGGAGACCTGAAAAATTCATCTTCAACAAAAGGAAGAACAGTGCCTGCCCAAGTGACCGGCTTGCATGTGGCCAACCAAGGGACAACAAGCAGTCTATTCACTAACTGGACCCAAGCACTGGGAGACGTAGACTTCTACCAAGTCTTACTGATCCATGAAAACGTGGTCATCAAAAATGAAAGTGTCTCCAGTGACACCAGCAGATACAGCTTCCACTCCCTCAAATCGGGCAGCCTCTACTCCATGGTGGTAACCACAGTAAGCGGAGGAATCTCTTCCCGACAAGTGGTGATGGAGGGAAGGACAGTCCCTTCCAGTGTGAGTGGAGTAAGGGTGAACAACTCTGGTCGCAATGACTACCTCAGCATATCCTGGCTGCCGGCTCCTGGAGACGTGGATAACTACGTGGTGACACTCTCCCACGATGGCAGAGTGGTTCAGTCCCTCGTGATTGCCAAGTCTGTCAGCGAATGTTCCTTCAGCTCCCTCACCCCCGGCCGCCTCTACAATGTGACCATAACTACGAGGAGTGGCAAGTATGAAAATCATTCCTTCGGCCAAGAGCGGACAGTGCCTGACAAGGTCCAGGGAGTCAGTATCAGCAACTCGGCCAGGAGCGACTATTTAAAGGTATCCTGGGTACATGCCACTGGAGACTTTGATCACTATGAAGTCACCATTAAAAACAAAAACAACTTCATTCAGACGAAAAGCATTCCCAAGTCTGAAAACGAGTGTATATTTGTTAAGCTAGTCCCTGGACGGTTGTACAGTGTCACTGTTACTACAAAAAGTGGACAATATGAAGCCAGTGAACAAGGGAATGGAAGAACAATCCCAGAGGCTGTTAAGGATCTCACATTGCAGAACAGGAGCACTGAGGGCCTTCAGGTGACATGGACACGAGCTGATGGGGACGTCGACCAGTATGAGATCCAACTGCTTTTCAACGATATGAAAGTATTTCCTCCTTTTCACCTTGTCAATACCGCAACTGAGTATCGATTCACCTCCCTCACACCAGGGCGCCAGTATAAAATTCTTGTCTTGACGATCAGTGGAGATGTACAACAGTCAGCCTTCATTGAGGGCTTCACAGTTCCTAGTGTTGTCAAAAATATTCACGTTTCTCCGAACGGGGCGACAGATAGCCTGACGGTGAACTGGACTCCAGGTGGGGGGGACGTGGATTCCTACACGGTGTCAGCATTCAGGCAAAATCAAAAGGTTGAGTCTCAGACCGTCCCCAAGCTTGTCTCTGAGCACACGTTCCACAGGCTGGAGGCCGGGGAGCAGTACCGGATCGTGATCGCCTCTGTCAGCGGGTCCCAGAAGAACCAGGTAGATGCGCTCGGGCGGACAGTCCCAGCGTCCGTCCAGGGAATAACTGCMGACAATGCATACAGTAGTCACTCCTTAATAGTAAGTTGGCAAAAAGCTGTTGGCGTGGCAGAAAGGTATGATATCCTGCTTCTAAGTGAAAATGGGATCCTCCTAAGTAACACGTCAGAGGCAGCCACCACTAAGCAGCACAAATTTGAAGACCTAATACCAGGAAAGAAATACAAGATACAGATCCTAACCGTCAGTGGAGGCCTTTTTAGCAAGGAAGCCCAAACCGAAGGCCGAACAGTCCCAGCAGCTGTCACCAACCTGAGAATCACAGAGAACGCCACCAGACACCTGTTCTTCAGCTGGACCCCCTCAGAGGGGGAGCTCAAATGGTACAACATCTTTCTGTACAACCCAGATCGAACTCTTCAGGAGCGAGCTCAAGTTGGCCCGCAAGTCCAGAGCTTCTCTTTTCAGAACTTGCTACAAGGTCGAATGTACAAAATGGTGATTGTAACTCACAGTGGGGAGCTGTCTAATGAGTCTTCCATATTCGGTAGAACAGTCCCAGCCTCTGTGAGTAACCTCAAAGGATCCAATCGAAACATGACAGACAGTCTCTGGTTCAGCTGGAGTCCAGCCTCTGGGGACTTCGACTTTTATGAGCTGATTCTCTATAACCCCAATGGCACAAAGAAGGAAAACTGGAAAGACAAGGACCTGACGGAGTGGCGTTTCCATGGCCTCGTTCCCGGAAGGAAATACACGCTGTGTGTGATAACTCATAGTGGAGATCTCAGCAACAAGGTCACGGGGGAGAGCAGAACAGCCCCAAGTCCTCCCAGTCTTATGTCATTTGCGGATGTTGCGAACACATCRTTGGCCATCACCTGGAAAGGGCCACCGGACTGGACAGACTACGATGACTTTGAGCTGCAGTGGTTCCCCAGAGATGCCGTCACAGTCTTCAACCCCTACAGCAACAGAAAATCAGAAGGACGCATCGTGTATGGTCTTCGTCCAGGGAGATCTTATCAATTCAGTGTCAAGACTGTCAGTGGTGATTCCTGGAAAACCTACAGCAAACCGATTTTTGGATCTGTGAGGACAAAGCCAGACAAGATACAGAATCTGCATTGCCGTCCTCAGAACTCCACGGCCATCGCCTGTTCTTGGATCCCTCCCGATTCTGACTTTGATGGGTACAGCATTGAGTGCCGGAAAATGGACACTCAAGAAGTTGAGTTCTCCAGAAAGTTGGAGAAAGAAAAATCTCTGCTCAACATCATGATGCTAGTGCCCCATAAGAGATACCTGGTGTCCATCAAGGTGCAGTCAGCCGGCATGACCAGTGAGGTGGTTGAAGACAGCACCATCACCATGATAGACCGCCCTCCTCCTCCACCTCCACATATTCGGGTGAATAAAAAGGATGTGCTAATTAGCAAATCTTCCATCAACTTTACTTTCAACTGCAGCTGGTTCAGTGACACCAATGGAGCTGTGAAATACTTCACAGTGGTGGTGAGAGAGGCTGACGGCAGTGATGAGCTGAAGCCAGAACAACAGCACCCTCTGCCCTCCTACCTGGAATACAGGCACAATGCCTCCATTCGGGTGTATCAGACTGATTATTTTGCCAGCAAATGTGCGGAAAGTCCTGACAGCAACTCTAAGAGTTTTAACATTAAGCTTGGTGCAGAGATGGAGAGCCTGGGTGGAAAATGTGATCCCAATCAGCAAAAATTTTGTGACGGACCGCTGAAGCCGCGCACGGCCTACAGAATCAGCATTCGGGCTTTTACCCAGCTATTTGATGAGGACCTGAAGGAATTCACAAAGCCACTCTATTCAGACACATTTTTCTCTTTGCCCATCACCACTGAGTCAGAGCCTTTGTTTGGAGTTATTGAAGGTGTGAGTGCTGGTCTGTTCTTAATTGGCATGCTGGTAGCTGTTGTTGCCTTATTAATCTGCAGACAGAAAGCCAGCCATGGTCGAGAAAGGCCCTCTGCCCGCCTGAGCATTCGTCGGGATCGACCACTGTCTGTCCACTTGAACCTGGGCCAAAAAGGTAACCGGAAGACTTCTTGCCCAATAAAAGTAAATCAGTTTGAAGGACACTTCATGAAGCTGCAGGCCGACTCCAACTACCTTCTATCCAAGGAATACGAGGACCTAAAAGACGTGGGTCGAAACCAATCATGTGACATTGCACTCTTGCCAGAGAATAGAGGGAAAAATCGATACAACAATATATTGCCCTATGATGCCTCTCGAGTGAAGCTGTCCAATGTGGATGATGACCCGTGCTCTGACTATATTAATGCCAGCTACATCCCTGGCAACAACTTCAGGAGAGAATACATCGCTACTCAGGGACCTCTTCCCGGCACCAAGGATGACTTCTGGAAAATGGCGTGGGAACAGAATGTTCACAACATCGTCATGGTGACCCAGTGTGTGGAGAAGGGCCGAGTAAAGTGTGACCACTACTGGCCAGCGGACCAGGATTCCCTCTACTATGGGGACCTCATCCTGCAGATGCTCTCGGAGTCCGTGCTGCCCGAGTGGACCATCCGGGAGTTTCGGATATGCAGCGAGGAACAGCTGGATGCCCACAGACTCATCCGCCACTTTCACTATACGGTGTGGCCGGACCACGGAGTCCCGGAGACCACACAGTCCCTGATCCAGTTTGTGAGAACTGTCAGGGACTACATCAACAGGACGCCGGGGGCCGGGCCCACCGCGGTGCACTGCAGTGCCGGTGTGGGTAGGACTGGAACCTTCATCGCATTGGACCGAATCCTCCAGCAATTAGATTCCAAAGATTCTGTGGACATTTATGGAGCAGTGCATGACCTAAGACTTCACAGGGTTCACATGGTCCAGACCGAGGAGTTAGTTTCTAAACCACAGACAAGACGCACCATGCTCCTGCACCCAAATGGTAACTTAGGTCAACAACAACCAGACCCATATCACTATGCCCTGTGTCAGTATGTATACCTACATCAGTGTGTAAGAGATGTTCTCAGAGCAAGGAAGCTACGGAGTGAACAAGAAAACCCCTTGTTTCCAATCTACGAAAATGTGAATCCAGAGTATCACAGAGGCTTGAGGGAAAGGCCCTCACAAAGTGGCAACAGGAAGAGAGGCAGAGTGGGGAGGAGAGCCCCCATAGTGGAGCACAGATTTCACGTGATGCGGGTTATTCAAGGCATTGAGAATGCACCCGGAGATCTTCTGGATCAAAACTATTCACTGTGTGATTTCTTTTTAAAAACTTGCTTCATGCCCTACAGAGGTGCCATCTATTTCTGTTGA

Related Sequences

bmy_07953T0 Protein

Length: 2011 aa      View alignments
>bmy_07953T0
MHLDYSKVSVYLQNSSSRLLFFVFCSADPLPPARFEVNKEKSTSTSLHVWWTPSSGKVTWYEVQLLDDNQKTQGAQIQERTSRNEYTFLNLTAGSKYKIAITAVSGDKRSSTIYANGSTVPSPVKDIGISAKTNSLLISWSRGSGNVERYQLILMDKGILVHSYAVDKSTTSYAFHGLIPGHLYNVTIVTEAAGLQNYRWKPARTTPMEVSNLKVTNDGTLTSLKVKWQRPSGNVDFYNITLSHQGTIKESRILAPQITETQFKDLAPGRLYQVTISCVSGELSAHKMAVGRTVPEEVGDLEANSNGSTRSLVVSWSPPAGDWEQYRILLLNDSLVLLNITVGKEETHYVIGDVGLIPGRQYEVEVTVESGNLKNSKRCHGRTVPLAVLQLRVKHANETSLGVMWQTPAAEWEKYIISLIDRDLLLIHKLLPKDAKEFTFTDLVPGRKYIATVSSISGDLKNSSSTKGRTVPAQVTGLHVANQGTTSSLFTNWTQALGDVDFYQVLLIHENVVIKNESVSSDTSRYSFHSLKSGSLYSMVVTTVSGGISSRQVVMEGRTVPSSVSGVRVNNSGRNDYLSISWLPAPGDVDNYVVTLSHDGRVVQSLVIAKSVSECSFSSLTPGRLYNVTITTRSGKYENHSFGQERTVPDKVQGVSISNSARSDYLKVSWVHATGDFDHYEVTIKNKNNFIQTKSIPKSENECIFVKLVPGRLYSVTVTTKSGQYEASEQGNGRTIPEAVKDLTLQNRSTEGLQVTWTRADGDVDQYEIQLLFNDMKVFPPFHLVNTATEYRFTSLTPGRQYKILVLTISGDVQQSAFIEGFTVPSVVKNIHVSPNGATDSLTVNWTPGGGDVDSYTVSAFRQNQKVESQTVPKLVSEHTFHRLEAGEQYRIVIASVSGSQKNQVDALGRTVPASVQGITADNAYSSHSLIVSWQKAVGVAERYDILLLSENGILLSNTSEAATTKQHKFEDLIPGKKYKIQILTVSGGLFSKEAQTEGRTVPAAVTNLRITENATRHLFFSWTPSEGELKWYNIFLYNPDRTLQERAQVGPQVQSFSFQNLLQGRMYKMVIVTHSGELSNESSIFGRTVPASVSNLKGSNRNMTDSLWFSWSPASGDFDFYELILYNPNGTKKENWKDKDLTEWRFHGLVPGRKYTLCVITHSGDLSNKVTGESRTAPSPPSLMSFADVANTSLAITWKGPPDWTDYDDFELQWFPRDAVTVFNPYSNRKSEGRIVYGLRPGRSYQFSVKTVSGDSWKTYSKPIFGSVRTKPDKIQNLHCRPQNSTAIACSWIPPDSDFDGYSIECRKMDTQEVEFSRKLEKEKSLLNIMMLVPHKRYLVSIKVQSAGMTSEVVEDSTITMIDRPPPPPPHIRVNKKDVLISKSSINFTFNCSWFSDTNGAVKYFTVVVREADGSDELKPEQQHPLPSYLEYRHNASIRVYQTDYFASKCAESPDSNSKSFNIKLGAEMESLGGKCDPNQQKFCDGPLKPRTAYRISIRAFTQLFDEDLKEFTKPLYSDTFFSLPITTESEPLFGVIEGVSAGLFLIGMLVAVVALLICRQKASHGRERPSARLSIRRDRPLSVHLNLGQKGNRKTSCPIKVNQFEGHFMKLQADSNYLLSKEYEDLKDVGRNQSCDIALLPENRGKNRYNNILPYDASRVKLSNVDDDPCSDYINASYIPGNNFRREYIATQGPLPGTKDDFWKMAWEQNVHNIVMVTQCVEKGRVKCDHYWPADQDSLYYGDLILQMLSESVLPEWTIREFRICSEEQLDAHRLIRHFHYTVWPDHGVPETTQSLIQFVRTVRDYINRTPGAGPTAVHCSAGVGRTGTFIALDRILQQLDSKDSVDIYGAVHDLRLHRVHMVQTEELVSKPQTRRTMLLHPNGNLGQQQPDPYHYALCQYVYLHQCVRDVLRARKLRSEQENPLFPIYENVNPEYHRGLRERPSQSGNRKRGRVGRRAPIVEHRFHVMRVIQGIENAPGDLLDQNYSLCDFFLKTCFMPYRGAIYFC*