Sequence detailsbmy_07953 (Coding sequence)

Part of scaffold_329 (SequenceType object (1))

For more information consult the page for scaffold_329 (SequenceType object (1))

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

PTPRBENSTTRG00000004840 (Bottlenosed dolphin)

Gene Details

protein tyrosine phosphatase, receptor type, B

External Links

Gene match(Ensembl Protein ID:ENSTTRP00000004563, Bottlenosed dolphin)

Protein Percentage 92.46%
cDNA percentage 92.2%
Ka/Ks Ratio 0.23418 (Ka = 0.0172, Ks = 0.0732)

PTPRBENSBTAG00000015296 (Cow)

Gene Details

Uncharacterized protein

External Links

Gene match(Ensembl Protein ID:ENSBTAP00000020345, Cow)

Protein Percentage 92.79%
cDNA percentage 92.49%
Ka/Ks Ratio 0.22273 (Ka = 0.0426, Ks = 0.1913)

PTPRB (Minke Whale)

Gene Details

protein tyrosine phosphatase, receptor type, B

External Links

Gene match (Identifier: BACU016427, Minke Whale)

Protein Percentage 95.2%
cDNA percentage 95.79%
Ka/Ks Ratio 0.53155 (Ka = 0.0361, Ks = 0.0679)

Additional orthologs identified in other species via the OPTIC pipeline.

PTPRB (Human)   Ptprb (Mouse)  

Genome Location

Sequence SequenceType object (2)

Length: 6033 bp    Location:199594..276706   Strand:+
Raw sequence 
>bmy_07953
ATGCATCTGGATTACAGCAAGGTAAGCGTGTATCTGCAAAATTCTTCAAGCCGCCTTCTCTTTTTTGTTTTTTGCTCTGCAGATCCTTTACCTCCTGCTAGGTTTGAAGTCAATAAAGAGAAAAGTACTTCCACCAGTTTGCATGTCTGGTGGACTCCTTCTTCCGGGAAAGTCACCTGGTATGAGGTGCAGTTACTTGATGATAACCAAAAGACACAGGGGGCCCAAATTCAAGAAAGAACTTCACGGAATGAATATACATTTTTAAACCTCACTGCTGGTAGTAAATACAAAATTGCCATCACAGCTGTTTCTGGGGATAAACGTTCCTCTACGATTTATGCCAATGGATCAACAGTGCCATCGCCAGTGAAAGATATTGGTATTTCAGCGAAAACGAATTCTCTCCTGATTTCCTGGTCACGTGGCTCTGGGAACGTGGAAAGATACCAGCTGATACTAATGGATAAAGGAATTCTAGTTCATAGTTATGCCGTGGACAAATCTACTACTTCCTATGCTTTTCATGGACTGATACCTGGTCACCTCTATAATGTCACCATTGTTACCGAGGCTGCAGGGCTGCAAAACTACAGATGGAAACCAGCCAGGACAACCCCCATGGAAGTCTCAAATCTGAAGGTGACAAATGATGGCACTTTGACCTCTCTAAAAGTCAAGTGGCAAAGACCTTCTGGAAATGTGGATTTCTACAACATTACACTGTCTCACCAAGGGACCATCAAAGAATCCAGAATATTAGCACCCCAGATTACTGAAACTCAATTTAAAGACTTAGCCCCTGGACGACTTTATCAAGTCACCATCAGCTGTGTCTCTGGTGAATTGTCTGCTCATAAGATGGCAGTGGGCAGAACAGTTCCAGAGGAAGTTGGGGACCTGGAGGCAAACAGCAATGGTTCTACAAGGTCCCTGGTAGTGAGCTGGTCGCCCCCTGCTGGAGACTGGGAGCAGTATCGTATCCTGCTTTTGAATGATTCTTTGGTGCTGCTCAACATCACCGTGGGAAAGGAGGAAACACACTATGTCATAGGTGATGTGGGGCTCATACCGGGAAGACAGTATGAGGTCGAAGTCACTGTTGAGAGCGGCAATCTGAAGAATTCTAAGCGTTGCCATGGCAGGACAGTGCCCCTGGCTGTCCTTCAGCTTCGTGTCAAACACGCCAATGAAACCTCACTGGGTGTCATGTGGCAGACCCCTGCAGCAGAATGGGAGAAATACATCATTTCACTAATTGACAGAGACCTCTTACTCATCCACAAGTTGCTCCCCAAAGATGCCAAAGAATTCACTTTTACTGACCTGGTGCCTGGACGAAAATACATAGCTACAGTCAGCAGTATTAGTGGAGACCTGAAAAATTCATCTTCAACAAAAGGAAGAACAGTGCCTGCCCAAGTGACCGGCTTGCATGTGGCCAACCAAGGGACAACAAGCAGTCTATTCACTAACTGGACCCAAGCACTGGGAGACGTAGACTTCTACCAAGTCTTACTGATCCATGAAAACGTGGTCATCAAAAATGAAAGTGTCTCCAGTGACACCAGCAGATACAGCTTCCACTCCCTCAAATCGGGCAGCCTCTACTCCATGGTGGTAACCACAGTAAGCGGAGGAATCTCTTCCCGACAAGTGGTGATGGAGGGAAGGACAGTCCCTTCCAGTGTGAGTGGAGTAAGGGTGAACAACTCTGGTCGCAATGACTACCTCAGCATATCCTGGCTGCCGGCTCCTGGAGACGTGGATAACTACGTGGTGACACTCTCCCACGATGGCAGAGTGGTTCAGTCCCTCGTGATTGCCAAGTCTGTCAGCGAATGTTCCTTCAGCTCCCTCACCCCCGGCCGCCTCTACAATGTGACCATAACTACGAGGAGTGGCAAGTATGAAAATCATTCCTTCGGCCAAGAGCGGACAGTGCCTGACAAGGTCCAGGGAGTCAGTATCAGCAACTCGGCCAGGAGCGACTATTTAAAGGTATCCTGGGTACATGCCACTGGAGACTTTGATCACTATGAAGTCACCATTAAAAACAAAAACAACTTCATTCAGACGAAAAGCATTCCCAAGTCTGAAAACGAGTGTATATTTGTTAAGCTAGTCCCTGGACGGTTGTACAGTGTCACTGTTACTACAAAAAGTGGACAATATGAAGCCAGTGAACAAGGGAATGGAAGAACAATCCCAGAGGCTGTTAAGGATCTCACATTGCAGAACAGGAGCACTGAGGGCCTTCAGGTGACATGGACACGAGCTGATGGGGACGTCGACCAGTATGAGATCCAACTGCTTTTCAACGATATGAAAGTATTTCCTCCTTTTCACCTTGTCAATACCGCAACTGAGTATCGATTCACCTCCCTCACACCAGGGCGCCAGTATAAAATTCTTGTCTTGACGATCAGTGGAGATGTACAACAGTCAGCCTTCATTGAGGGCTTCACAGTTCCTAGTGTTGTCAAAAATATTCACGTTTCTCCGAACGGGGCGACAGATAGCCTGACGGTGAACTGGACTCCAGGTGGGGGGGACGTGGATTCCTACACGGTGTCAGCATTCAGGCAAAATCAAAAGGTTGAGTCTCAGACCGTCCCCAAGCTTGTCTCTGAGCACACGTTCCACAGGCTGGAGGCCGGGGAGCAGTACCGGATCGTGATCGCCTCTGTCAGCGGGTCCCAGAAGAACCAGGTAGATGCGCTCGGGCGGACAGTCCCAGCGTCCGTCCAGGGAATAACTGCMGACAATGCATACAGTAGTCACTCCTTAATAGTAAGTTGGCAAAAAGCTGTTGGCGTGGCAGAAAGGTATGATATCCTGCTTCTAAGTGAAAATGGGATCCTCCTAAGTAACACGTCAGAGGCAGCCACCACTAAGCAGCACAAATTTGAAGACCTAATACCAGGAAAGAAATACAAGATACAGATCCTAACCGTCAGTGGAGGCCTTTTTAGCAAGGAAGCCCAAACCGAAGGCCGAACAGTCCCAGCAGCTGTCACCAACCTGAGAATCACAGAGAACGCCACCAGACACCTGTTCTTCAGCTGGACCCCCTCAGAGGGGGAGCTCAAATGGTACAACATCTTTCTGTACAACCCAGATCGAACTCTTCAGGAGCGAGCTCAAGTTGGCCCGCAAGTCCAGAGCTTCTCTTTTCAGAACTTGCTACAAGGTCGAATGTACAAAATGGTGATTGTAACTCACAGTGGGGAGCTGTCTAATGAGTCTTCCATATTCGGTAGAACAGTCCCAGCCTCTGTGAGTAACCTCAAAGGATCCAATCGAAACATGACAGACAGTCTCTGGTTCAGCTGGAGTCCAGCCTCTGGGGACTTCGACTTTTATGAGCTGATTCTCTATAACCCCAATGGCACAAAGAAGGAAAACTGGAAAGACAAGGACCTGACGGAGTGGCGTTTCCATGGCCTCGTTCCCGGAAGGAAATACACGCTGTGTGTGATAACTCATAGTGGAGATCTCAGCAACAAGGTCACGGGGGAGAGCAGAACAGCCCCAAGTCCTCCCAGTCTTATGTCATTTGCGGATGTTGCGAACACATCRTTGGCCATCACCTGGAAAGGGCCACCGGACTGGACAGACTACGATGACTTTGAGCTGCAGTGGTTCCCCAGAGATGCCGTCACAGTCTTCAACCCCTACAGCAACAGAAAATCAGAAGGACGCATCGTGTATGGTCTTCGTCCAGGGAGATCTTATCAATTCAGTGTCAAGACTGTCAGTGGTGATTCCTGGAAAACCTACAGCAAACCGATTTTTGGATCTGTGAGGACAAAGCCAGACAAGATACAGAATCTGCATTGCCGTCCTCAGAACTCCACGGCCATCGCCTGTTCTTGGATCCCTCCCGATTCTGACTTTGATGGGTACAGCATTGAGTGCCGGAAAATGGACACTCAAGAAGTTGAGTTCTCCAGAAAGTTGGAGAAAGAAAAATCTCTGCTCAACATCATGATGCTAGTGCCCCATAAGAGATACCTGGTGTCCATCAAGGTGCAGTCAGCCGGCATGACCAGTGAGGTGGTTGAAGACAGCACCATCACCATGATAGACCGCCCTCCTCCTCCACCTCCACATATTCGGGTGAATAAAAAGGATGTGCTAATTAGCAAATCTTCCATCAACTTTACTTTCAACTGCAGCTGGTTCAGTGACACCAATGGAGCTGTGAAATACTTCACAGTGGTGGTGAGAGAGGCTGACGGCAGTGATGAGCTGAAGCCAGAACAACAGCACCCTCTGCCCTCCTACCTGGAATACAGGCACAATGCCTCCATTCGGGTGTATCAGACTGATTATTTTGCCAGCAAATGTGCGGAAAGTCCTGACAGCAACTCTAAGAGTTTTAACATTAAGCTTGGTGCAGAGATGGAGAGCCTGGGTGGAAAATGTGATCCCAATCAGCAAAAATTTTGTGACGGACCGCTGAAGCCGCGCACGGCCTACAGAATCAGCATTCGGGCTTTTACCCAGCTATTTGATGAGGACCTGAAGGAATTCACAAAGCCACTCTATTCAGACACATTTTTCTCTTTGCCCATCACCACTGAGTCAGAGCCTTTGTTTGGAGTTATTGAAGGTGTGAGTGCTGGTCTGTTCTTAATTGGCATGCTGGTAGCTGTTGTTGCCTTATTAATCTGCAGACAGAAAGCCAGCCATGGTCGAGAAAGGCCCTCTGCCCGCCTGAGCATTCGTCGGGATCGACCACTGTCTGTCCACTTGAACCTGGGCCAAAAAGGTAACCGGAAGACTTCTTGCCCAATAAAAGTAAATCAGTTTGAAGGACACTTCATGAAGCTGCAGGCCGACTCCAACTACCTTCTATCCAAGGAATACGAGGACCTAAAAGACGTGGGTCGAAACCAATCATGTGACATTGCACTCTTGCCAGAGAATAGAGGGAAAAATCGATACAACAATATATTGCCCTATGATGCCTCTCGAGTGAAGCTGTCCAATGTGGATGATGACCCGTGCTCTGACTATATTAATGCCAGCTACATCCCTGGCAACAACTTCAGGAGAGAATACATCGCTACTCAGGGACCTCTTCCCGGCACCAAGGATGACTTCTGGAAAATGGCGTGGGAACAGAATGTTCACAACATCGTCATGGTGACCCAGTGTGTGGAGAAGGGCCGAGTAAAGTGTGACCACTACTGGCCAGCGGACCAGGATTCCCTCTACTATGGGGACCTCATCCTGCAGATGCTCTCGGAGTCCGTGCTGCCCGAGTGGACCATCCGGGAGTTTCGGATATGCAGCGAGGAACAGCTGGATGCCCACAGACTCATCCGCCACTTTCACTATACGGTGTGGCCGGACCACGGAGTCCCGGAGACCACACAGTCCCTGATCCAGTTTGTGAGAACTGTCAGGGACTACATCAACAGGACGCCGGGGGCCGGGCCCACCGCGGTGCACTGCAGTGCCGGTGTGGGTAGGACTGGAACCTTCATCGCATTGGACCGAATCCTCCAGCAATTAGATTCCAAAGATTCTGTGGACATTTATGGAGCAGTGCATGACCTAAGACTTCACAGGGTTCACATGGTCCAGACCGAGGAGTTAGTTTCTAAACCACAGACAAGACGCACCATGCTCCTGCACCCAAATGGTAACTTAGGTCAACAACAACCAGACCCATATCACTATGCCCTGTGTCAGTATGTATACCTACATCAGTGTGTAAGAGATGTTCTCAGAGCAAGGAAGCTACGGAGTGAACAAGAAAACCCCTTGTTTCCAATCTACGAAAATGTGAATCCAGAGTATCACAGAGGCTTGAGGGAAAGGCCCTCACAAAGTGGCAACAGGAAGAGAGGCAGAGTGGGGAGGAGAGCCCCCATAGTGGAGCACAGATTTCACGTGATGCGGGTTATTCAAGGCATTGAGAATGCACCCGGAGATCTTCTGGATCAAAACTATTCACTGTGTGATTTCTTTTTAAAAACTTGCTTCATGCCCTACAGAGGTGCCATCTATTTCTGTTGA

Related Sequences

bmy_07953T0 SequenceType object (3)

Length: 2011 aa      View alignments
>bmy_07953T0
MHLDYSKVSVYLQNSSSRLLFFVFCSADPLPPARFEVNKEKSTSTSLHVWWTPSSGKVTWYEVQLLDDNQKTQGAQIQERTSRNEYTFLNLTAGSKYKIAITAVSGDKRSSTIYANGSTVPSPVKDIGISAKTNSLLISWSRGSGNVERYQLILMDKGILVHSYAVDKSTTSYAFHGLIPGHLYNVTIVTEAAGLQNYRWKPARTTPMEVSNLKVTNDGTLTSLKVKWQRPSGNVDFYNITLSHQGTIKESRILAPQITETQFKDLAPGRLYQVTISCVSGELSAHKMAVGRTVPEEVGDLEANSNGSTRSLVVSWSPPAGDWEQYRILLLNDSLVLLNITVGKEETHYVIGDVGLIPGRQYEVEVTVESGNLKNSKRCHGRTVPLAVLQLRVKHANETSLGVMWQTPAAEWEKYIISLIDRDLLLIHKLLPKDAKEFTFTDLVPGRKYIATVSSISGDLKNSSSTKGRTVPAQVTGLHVANQGTTSSLFTNWTQALGDVDFYQVLLIHENVVIKNESVSSDTSRYSFHSLKSGSLYSMVVTTVSGGISSRQVVMEGRTVPSSVSGVRVNNSGRNDYLSISWLPAPGDVDNYVVTLSHDGRVVQSLVIAKSVSECSFSSLTPGRLYNVTITTRSGKYENHSFGQERTVPDKVQGVSISNSARSDYLKVSWVHATGDFDHYEVTIKNKNNFIQTKSIPKSENECIFVKLVPGRLYSVTVTTKSGQYEASEQGNGRTIPEAVKDLTLQNRSTEGLQVTWTRADGDVDQYEIQLLFNDMKVFPPFHLVNTATEYRFTSLTPGRQYKILVLTISGDVQQSAFIEGFTVPSVVKNIHVSPNGATDSLTVNWTPGGGDVDSYTVSAFRQNQKVESQTVPKLVSEHTFHRLEAGEQYRIVIASVSGSQKNQVDALGRTVPASVQGITADNAYSSHSLIVSWQKAVGVAERYDILLLSENGILLSNTSEAATTKQHKFEDLIPGKKYKIQILTVSGGLFSKEAQTEGRTVPAAVTNLRITENATRHLFFSWTPSEGELKWYNIFLYNPDRTLQERAQVGPQVQSFSFQNLLQGRMYKMVIVTHSGELSNESSIFGRTVPASVSNLKGSNRNMTDSLWFSWSPASGDFDFYELILYNPNGTKKENWKDKDLTEWRFHGLVPGRKYTLCVITHSGDLSNKVTGESRTAPSPPSLMSFADVANTSLAITWKGPPDWTDYDDFELQWFPRDAVTVFNPYSNRKSEGRIVYGLRPGRSYQFSVKTVSGDSWKTYSKPIFGSVRTKPDKIQNLHCRPQNSTAIACSWIPPDSDFDGYSIECRKMDTQEVEFSRKLEKEKSLLNIMMLVPHKRYLVSIKVQSAGMTSEVVEDSTITMIDRPPPPPPHIRVNKKDVLISKSSINFTFNCSWFSDTNGAVKYFTVVVREADGSDELKPEQQHPLPSYLEYRHNASIRVYQTDYFASKCAESPDSNSKSFNIKLGAEMESLGGKCDPNQQKFCDGPLKPRTAYRISIRAFTQLFDEDLKEFTKPLYSDTFFSLPITTESEPLFGVIEGVSAGLFLIGMLVAVVALLICRQKASHGRERPSARLSIRRDRPLSVHLNLGQKGNRKTSCPIKVNQFEGHFMKLQADSNYLLSKEYEDLKDVGRNQSCDIALLPENRGKNRYNNILPYDASRVKLSNVDDDPCSDYINASYIPGNNFRREYIATQGPLPGTKDDFWKMAWEQNVHNIVMVTQCVEKGRVKCDHYWPADQDSLYYGDLILQMLSESVLPEWTIREFRICSEEQLDAHRLIRHFHYTVWPDHGVPETTQSLIQFVRTVRDYINRTPGAGPTAVHCSAGVGRTGTFIALDRILQQLDSKDSVDIYGAVHDLRLHRVHMVQTEELVSKPQTRRTMLLHPNGNLGQQQPDPYHYALCQYVYLHQCVRDVLRARKLRSEQENPLFPIYENVNPEYHRGLRERPSQSGNRKRGRVGRRAPIVEHRFHVMRVIQGIENAPGDLLDQNYSLCDFFLKTCFMPYRGAIYFC*