Part of scaffold_329 (Scaffold)

For more information consult the page for scaffold_329 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

ENSTTRG00000012538 (Bottlenosed dolphin)

Gene Details

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000011896, Bottlenosed dolphin)

Protein Percentage 93.26%
cDNA percentage 94.03%
Ka/Ks Ratio 0.28818 (Ka = 0.0388, Ks = 0.1348)

RAB3IP ENSBTAG00000031950 (Cow)

Gene Details

rab-3A-interacting protein

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000022990, Cow)

Protein Percentage 93.68%
cDNA percentage 93.15%
Ka/Ks Ratio 0.1813 (Ka = 0.0378, Ks = 0.2084)

RAB3IP  (Minke Whale)

Gene Details

RAB3A interacting protein

External Links

Gene match (Identifier: BACU016431, Minke Whale)

Protein Percentage 94.95%
cDNA percentage 96.34%
Ka/Ks Ratio 0.53682 (Ka = 0.0331, Ks = 0.0616)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 1377 bp    Location:906650..836136   Strand:-
>bmy_07962
ATGGAGGTCCTCCAACACTGGTTATCCTATGATGAGGCATTTGCTATGGCTAATGACCCCTTGGAAGGCTTCCATGAAGTAAACCTTGCTTCACCTACTTCTCCAGACCTTCTTGGTGTGTATGAACCGGGAACTCAAGAGCAGACTACCTCACCAAGTGTCATCTACCGGCCACATCCTTCAGCTTTATGCTCCGCCCCTATCCAGGCTAATGCCTTAGATGTTTCCGACCTTCCTACACAACCTGTGTATTCATCCCCCAGACGTTTAAATTGTGCAGAAATATCTAGTGTCAGCATCCATGTTACAGACCCAGCACCTACCTCTGGAATCACAGCTGGGTTAACTAAATTAACTGCAAGAAAGGACAACTGTAATGCAGAGAGGGAGTTTTTACAGGGTGCTACCATAACAGAGGCTTGTGATGGCAGTGATGATATTTTGGGGTTGAGTACTGATAGTCTGTCCCGCTTACGAAGCCCATCTGTTTTGGAAGTTAGAGAAAAGGGCTATGAAAGATTAAAAGAAGAACTTGCAAAAGCTCAGAGGGAACTGAAGTTAAAAGATGAAGAGTGTGAGAGGCTTTCTAAAGTACGAGATCAACTTGGACAGGAATTGGAGGAACTCACAGCTAGTCTATTTGAGGAAGCTCATAAGATGGTGAGAGAAGCAAATGTCAAGCAGGCAACAGCAGAAAAACAGCTAAAAGAAGCACAAGGAAAAATTGATGTACTTCAAGCTGAAGTAGCTGCATTGAAGACACTTGTATTGTCCAGTTCTCCAACGTCACCTACACAAGAGCCTCTGCCAGGTGGAAAGACACATTTTAAAAAGGGGCATACAAGAAATAAAAGTACAAGCAGTGCTATGAGTGGCAGTCATCAGGACCTCAGTGTGATACAGCCAATTGTAAAAGACTGCAAAGAGGCTGACTTATCCCTGTATAATGAATTCAGATCTTGGAAGGATGAGCCCATAATGGACAGAAAATGTCCTTTCTTAGACAAAATCTATCAGGAAGATATTTTTCCATGTTTAACCTTCTCAAAAAGTGAGTTGGCTTCGGCTGTTCTGGAGGCTGTGGAAAACAATACTCTAAGCATTGAACCAGTGGGACTACAACCTATTCGATTTGTGAAAGCATCTGCCGTTGAATGTGGAGGACCAAAATCATTAAAGGAATTTTCTAATAAAGGAACAATGAGGCTAAATCTCTTTGAAAAGATCACTTCTGTATGTAACTTTTTCACGTATATTCGATATATTCAACAGGGACTTGTGAAACAGCAGGATGTTGATCAAATGTTTTGGGAAGTTATGCAGTTGAGAAAAGAGATGTCATTGGCAAAGCTGGGATATTTCAAAGAGGAACTGTGA

Related Sequences

bmy_07962T0 Protein

Length: 459 aa      View alignments
>bmy_07962T0
MEVLQHWLSYDEAFAMANDPLEGFHEVNLASPTSPDLLGVYEPGTQEQTTSPSVIYRPHPSALCSAPIQANALDVSDLPTQPVYSSPRRLNCAEISSVSIHVTDPAPTSGITAGLTKLTARKDNCNAEREFLQGATITEACDGSDDILGLSTDSLSRLRSPSVLEVREKGYERLKEELAKAQRELKLKDEECERLSKVRDQLGQELEELTASLFEEAHKMVREANVKQATAEKQLKEAQGKIDVLQAEVAALKTLVLSSSPTSPTQEPLPGGKTHFKKGHTRNKSTSSAMSGSHQDLSVIQPIVKDCKEADLSLYNEFRSWKDEPIMDRKCPFLDKIYQEDIFPCLTFSKSELASAVLEAVENNTLSIEPVGLQPIRFVKASAVECGGPKSLKEFSNKGTMRLNLFEKITSVCNFFTYIRYIQQGLVKQQDVDQMFWEVMQLRKEMSLAKLGYFKEEL*