Part of scaffold_329 (Scaffold)

For more information consult the page for scaffold_329 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

CCT2 ENSTTRG00000012534 (Bottlenosed dolphin)

Gene Details

chaperonin containing TCP1, subunit 2 (beta)

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000011893, Bottlenosed dolphin)

Protein Percentage 91.94%
cDNA percentage 93.58%
Ka/Ks Ratio 0.49293 (Ka = 0.0569, Ks = 0.1154)

CCT2 ENSBTAG00000019156 (Cow)

Gene Details

T-complex protein 1 subunit beta

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000025496, Cow)

Protein Percentage 91.75%
cDNA percentage 90.7%
Ka/Ks Ratio 0.20195 (Ka = 0.0569, Ks = 0.2818)

CCT2  (Minke Whale)

Gene Details

chaperonin containing TCP1, subunit 2 (beta)

External Links

Gene match (Identifier: BACU016434, Minke Whale)

Protein Percentage 91.0%
cDNA percentage 93.3%
Ka/Ks Ratio 0.69763 (Ka = 0.0656, Ks = 0.094)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 1572 bp    Location:1036584..1016018   Strand:-
>bmy_07966
ATGGCAGCGAGGCCGCAGCGTCCCTTCGTCCTCCTGGCGGTCGTCGCGTCCCTTTCCCTTGCACCTGTTAATATCTTCAAGGCTGGAGCTGATGAAGAGCGAGCAGAGACAGCTCGTCTGTCTTCTTTTGTTGGTGCCATTGCTATTGGAGACTTGGTAAAGAGCACGTTGGGACCCAAGGGCATGGACAAAATTCTGTTAAGCAGTGGACGAGATGCTTCTCTTATGGTAACCAATGATGGTGCAACTATTTTAAAAAACATTGGTGTGGACAATCCAGCTGCTAAAGTTTTAGTTGATATGTCAAGGGTTCAAGATGATGAAGTTGGTGATGGCACTACCTCTGTTACTGTTTTAGCAGCAGAATTACTAAGGGAAGCAGAATCTTTAATTGCAAAAAAGATTCATCCACAGACCATTATTGCGGGTTGGAGAGAAGCCACAAAGGCGGCAAGACAGGCTCTGTTGAATTCTGCAGTTGATCATGGTTCTGACGAAGTTAAATTCCGTCAAGATTTAATGAACATTGCAGGAACAACATTATCTTCAAAACTTCTTACTCATCACAAAGACCACTTTACTAAGTTAGCCGTGGAAGCCGTTCTCAGACTGAAAGGCTCTGGTAATCTGGAGGCAATTCATGTCATCAAGAAGCTAGGAGGAAGTCTGGCAGATTCCTATTTAGATGAAGGCTTTCTGTTGGATAAAAAAATTGGAGTAAATCAACCAAAGCGAATTGAAAATGCTAAAATTCTTATTGCAAATACTGGTATGGATACAGACAAAATTAAGATATTTGGTTCCCGGGTAAGAGTTGATTCTACAGCAAAAGTTGCCGAAATAGAACATGCAGAAAAGGAAAAAATGAAGGAGAAAGTTGAACGTATTCTAAAGCATGGGATAAATTGCTTTATTAACAGGCAGTTATTAGTTTGGGCTGTAGTATACCTGTATTTGGAAGAGAGATTTAATTCCACATTAAATGATGGGGGTTTGAAGTACGAAAAAGCTAATGGTGGTGAAATTGCGTCTACCTTTGACCACCCAGAACTAGTGAAGCTTGGAAGTTGCAAACTTATTGAGGAAGTCATGATTGGAGAAGACAAACTGATTCACTTTTCTGGGGTAGCCCTTGGTGAGGCTTGCACCATTGTTCTGCGTGGTGCCACTCAACAAATTTTAGATGAAGCAGAAAGATCTTTGCATGATGCTCTTTGTGTTCTTGCCCAAACTGTGAAAGATTCTAGAACAGTTTATGGAGGAGGCTGTTCTGAGATGCTGATGGCTCATGCTGTGACACAGCTTGCGAGTAGAACACCGGGCAAAGAAGCCGTTGCAATGGAGTCTTATGCTAAAGCACTGAGAATGATTAGTTGTTTATTTAGTAAATACTTTCCAGATATGAAGGAAGGTACCATTGGAGATATGGCAATGCTGGGTATAACAGAAAGTTTCCAAGTGAAGCGACAAGTTCTTTTAAGTGCAGCTGAAGCAGCAGAGGTGATTCTACGTGTGGACAACATCATCAAGGCAGCACCAAGGAAACGTGTCCCTGATCACCTCCCCTGTTAA

Related Sequences

bmy_07966T0 Protein

Length: 524 aa      View alignments
>bmy_07966T0
MAARPQRPFVLLAVVASLSLAPVNIFKAGADEERAETARLSSFVGAIAIGDLVKSTLGPKGMDKILLSSGRDASLMVTNDGATILKNIGVDNPAAKVLVDMSRVQDDEVGDGTTSVTVLAAELLREAESLIAKKIHPQTIIAGWREATKAARQALLNSAVDHGSDEVKFRQDLMNIAGTTLSSKLLTHHKDHFTKLAVEAVLRLKGSGNLEAIHVIKKLGGSLADSYLDEGFLLDKKIGVNQPKRIENAKILIANTGMDTDKIKIFGSRVRVDSTAKVAEIEHAEKEKMKEKVERILKHGINCFINRQLLVWAVVYLYLEERFNSTLNDGGLKYEKANGGEIASTFDHPELVKLGSCKLIEEVMIGEDKLIHFSGVALGEACTIVLRGATQQILDEAERSLHDALCVLAQTVKDSRTVYGGGCSEMLMAHAVTQLASRTPGKEAVAMESYAKALRMISCLFSKYFPDMKEGTIGDMAMLGITESFQVKRQVLLSAAEAAEVILRVDNIIKAAPRKRVPDHLPC*