Sequence details bmy_07976 (Coding sequence)

Part of scaffold_332 (Scaffold)

For more information consult the page for scaffold_332 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

SEMA4D ENSTTRG00000003357 (Bottlenosed dolphin)

Gene Details

sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4D

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000003147, Bottlenosed dolphin)

Protein Percentage 92.35%
cDNA percentage 92.31%
Ka/Ks Ratio 0.15647 (Ka = 0.0228, Ks = 0.146)

SEMA4D ENSBTAG00000001941 (Cow)

Gene Details

semaphorin-4D precursor

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000002525, Cow)

Protein Percentage 74.01%
cDNA percentage 77.19%
Ka/Ks Ratio 0.27878 (Ka = 0.2038, Ks = 0.7311)

SEMA4D  (Minke Whale)

Gene Details

sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4D

External Links

Gene match (Identifier: BACU015638, Minke Whale)

Protein Percentage 96.04%
cDNA percentage 96.11%
Ka/Ks Ratio 0.25202 (Ka = 0.0266, Ks = 0.1054)

Additional orthologs identified in other species via the OPTIC pipeline.

SEMA4D (Human)   Sema4d (Mouse)  

Genome Location

Sequence Coding sequence

Length: 2718 bp    Location:821523..844753   Strand:+
Raw sequence 
>bmy_07976
ATGAGGATGTGCGCCCCCGTCGGGGGGCTGCTCACCGCCCTCGCCGTGGTGTTTGGGACAGCAGTGGCGTTTGCACCCATACCTAGGATCACCTGGGAGCACAGAGAGGTGCAGCTGGTGCAGTTTCACGAGCCGGGCATCTTCAACTACTCGGCCTTGCTGCTGAGTGAGGACAAGGACACCTTGTACGTGGGCGCCCGGGAAGCCGTGTTTGCCTTGAACGCACACAATATCTCCAAGAAGCAGCATGAGGCATATTGGAAGGTCTCAGAAGATAAAAAAGCAAAATGCGCAGAAAAGGGGAAATCAAAACAGACAGAATGCCTTAACTACATCCGGGTGCTGCAGCCCCTCAGCGCCAGTGCCCTTTACGTGTGCGGGACCAACGCGTTCCAGCCAGCCTGTGACCACCTGAACTTAACATCCTTTAAATTTCTGGGCAAAAATGAAGATGGCAAAGGAAGGTGTCCCTTCGACCCAGCACAAAGCTACACGTCCGTCATGGTTGATGGAGAGCTTTATTCTGGGACGTCGTATAACTTTTTGGGAAGCGAACCCATCATCTCCCGAAATTCTTCCCACAGTCCTCTGAGAACGGAATATGCGATTCCTTGGCTTAACGAGCCCAGCTTCGTGTTTGCTGACGTGATAGGAGAGAGCCCGGAGGGCGGGGACGGCGAGGACGACAAGGTCTACTTCTTCTTCACGGAGGTGTCTGTGGAGTACGAGTTCATCTTCAAGCTGATGATCCCACGGGTAGCGAGGGTCTGCAAGGGGGACCAGGGCGGCCTGAGGACCTTACAGAAGAAGTGGACCTCCTTCCTGAAGGCCAGGCTGATCTGCTCCCGGCCGGACAGCAACCTCGTCTTCAACGTGCTGCGAGACGTCTTTGTCCTCAGGTCTCCCAGCCTGAAGGAGCCCATGTTCTATGGGGTCTTCACCCCACAGCTGAACAACGTGGGGCTCTCGGCCGTGTGCGCCTACAACCTGTCCACAGCCGAGGCGGTCTTCTCCCGTGGGAAGTACATGCAGAGCGCCACGGTGGAGCAGTCCCACACCAAGTGGGTGCGCTACAACGGGGCCGTGCCCACGCCGCGGCCCGGGGCGTGCATCAACCGGGAGGCGCGTGCCGCCAACTTCTCCAGCTCCCTCAACCTACCAGACAAGACTCTGCAGTTTGTCAAAGACCACCCTCTGATGGATGACTCCGTGACCCCAATAGACAACAGGCCCCGGCTGATCAAGAGTGACGTGAACTACACACAGATCGTGGTGGACAGGACCCGGGCCCTGGATGGGACAGTCCATGACGTCATGTTTGTCAGCACAGGTGGGTCCCGGGCCCTGGGTAAGAACATGGACCGGGGTGCCCTGCACAAAGCCATCAGCCTTGAGAACGACGTCCACATCATCGAGGAGACACAGCTCTTCCAGGACTTCGAGCCTGTCCAGACCCTGCTGCTGTCCTCCAAGAAGGGCAGAAGGTTTGTCTATGCCGGTTCCAACTCAGGCGTGGTGCAGGCCCCCGTGGCCTTCTGCGGAAAACACGGCACCTGCGAGGACTGCGTGCTGGCCCGGGACCCCTACTGCGCCTGGAGCCCGGCCGCAGCCGCCTGTATCGCCCTGCACCAGACCGACGGCCCCAGCAGGTACCGGCCCCACTGCATGCAGGCGCTCCTCCCAGCCCCATGGTGTCAAGCGCATGCACTGTGTAACCTGTGCCCGGTTGTCTTGCAGGGGTTTGATTCAGGAGATGAGCGGGGATGTGTCCGCTTGCCCCGAACAGGATATAAAATTAAAGAAAGTTACCTGCAGCATTTTTTCAAGCATGGTGGCACAGCAGAACTCAAGTGCTCCCAAAAGTCCAACCTGGCCCGGGTGGTGTGGAAGTTCCAGAACGGCGTGCTCAAGGCCGAAAGCCCCAAGTACAGCCTGGTGGGCAGGAAGAACTTGCTCATCTTCAACCTGTCAGAAGGAGACAGTGGGGTGTACCAGTGCCTGTCTGAGGAGAGGGTCAAGAACAAGACAGTCCTGCAGGTGGTGGCCAAGCACGTTCTGGAGGTCAAGGTGGTCCCTCGAACTCCGGTGGTCTCCACCTCGCCGGTCACACGGACAGAAGGTAGTAGGATCACCTCCAAAGTGTCAGCGGGGCCCACCCGAGGCTCCTTTCCCCAGACCCCGGCCGTGCAGGCCACCACGCCCAGTGCCATCGCCCCGCCGTCCAGCCCCGAGGGGCCCACCGGCACGTCCTGTGAACCAAAGATTGTCATCAACACGGTCCCCGAGGTCCACTCGGAGAAGACGATGTATCTCAAGTACAGTGACAACCGTCTCCTCATGTTTCTCTTCCTCTTCTTCTTCGCCCTCTTCCTCTGCCTCTTCACCTATAACTGCTATAAGGCCTACCTGCCTGGACAGTGCTTAAAGTTCCGCTCGGCCATGCTCCTGGGGAAGAAGCAGCCCACGTCGGACTTCTCAGACTGCGAGCAGAGCATGAAGGAGACGCTGGTGGAGCAGGGCAGCTTCTCCCAGCAGAACGGCGGGCAGCCCAAGCCGGCCCTGGACACCGGCTATGAGACAGAGCAGGACACCGTGGCCAGCAGGCTGCCCACCGACCGGGAGGACTCGCAGAAGATCGACGAGCTCCCGGTCCGGGACCGGCCATTCGACGTCAAGTGCGAGCTGAAGTTCGCCGACTCGGACGCGGACGGGGACTGA

Related Sequences

bmy_07976T0 Protein

Length: 906 aa      View alignments
>bmy_07976T0
MRMCAPVGGLLTALAVVFGTAVAFAPIPRITWEHREVQLVQFHEPGIFNYSALLLSEDKDTLYVGAREAVFALNAHNISKKQHEAYWKVSEDKKAKCAEKGKSKQTECLNYIRVLQPLSASALYVCGTNAFQPACDHLNLTSFKFLGKNEDGKGRCPFDPAQSYTSVMVDGELYSGTSYNFLGSEPIISRNSSHSPLRTEYAIPWLNEPSFVFADVIGESPEGGDGEDDKVYFFFTEVSVEYEFIFKLMIPRVARVCKGDQGGLRTLQKKWTSFLKARLICSRPDSNLVFNVLRDVFVLRSPSLKEPMFYGVFTPQLNNVGLSAVCAYNLSTAEAVFSRGKYMQSATVEQSHTKWVRYNGAVPTPRPGACINREARAANFSSSLNLPDKTLQFVKDHPLMDDSVTPIDNRPRLIKSDVNYTQIVVDRTRALDGTVHDVMFVSTGGSRALGKNMDRGALHKAISLENDVHIIEETQLFQDFEPVQTLLLSSKKGRRFVYAGSNSGVVQAPVAFCGKHGTCEDCVLARDPYCAWSPAAAACIALHQTDGPSRYRPHCMQALLPAPWCQAHALCNLCPVVLQGFDSGDERGCVRLPRTGYKIKESYLQHFFKHGGTAELKCSQKSNLARVVWKFQNGVLKAESPKYSLVGRKNLLIFNLSEGDSGVYQCLSEERVKNKTVLQVVAKHVLEVKVVPRTPVVSTSPVTRTEGSRITSKVSAGPTRGSFPQTPAVQATTPSAIAPPSSPEGPTGTSCEPKIVINTVPEVHSEKTMYLKYSDNRLLMFLFLFFFALFLCLFTYNCYKAYLPGQCLKFRSAMLLGKKQPTSDFSDCEQSMKETLVEQGSFSQQNGGQPKPALDTGYETEQDTVASRLPTDREDSQKIDELPVRDRPFDVKCELKFADSDADGD*