Part of scaffold_332 (Scaffold)

For more information consult the page for scaffold_332 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

SECISBP2 ENSTTRG00000003339 (Bottlenosed dolphin)

Gene Details

SECIS binding protein 2

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000003138, Bottlenosed dolphin)

Protein Percentage 95.9%
cDNA percentage 97.01%
Ka/Ks Ratio 0.50687 (Ka = 0.0238, Ks = 0.0469)

SECISBP2 ENSBTAG00000001939 (Cow)

Gene Details

Uncharacterized protein

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000002523, Cow)

Protein Percentage 87.5%
cDNA percentage 91.25%
Ka/Ks Ratio 0.3946 (Ka = 0.0664, Ks = 0.1683)

SECISBP2  (Minke Whale)

Gene Details

SECIS binding protein 2

External Links

Gene match (Identifier: BACU015637, Minke Whale)

Protein Percentage 97.75%
cDNA percentage 98.75%
Ka/Ks Ratio 0.70496 (Ka = 0.011, Ks = 0.0155)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 2598 bp    Location:899556..858777   Strand:-
>bmy_07978
CAGGCCGGAAGCAGGGCGGGGCCGGGGCGCGTTTTTGTGACGCACTTCCTGGAGTCCGCTCCGAAGGTGGAAAAGCGGGGAGGAGGAGCGTCGCGCTTCGGTTCCGCTAGCCGTCGGACTACTGGCCTCCCTGGCCAGGCCTCTTCCCAGCCACCCGCCATGGCGTCTGCGGGGCGGCGGGAGCCCGCGGGCGAGGGCATCAAGTTGTCAGCAGATGTCAAACCATTTGTCCCTAAATTTGCTGGGCTCAGTGTGGCATGGTCAGAGTCTTCAGAAGCACGCGTTTTTCCCAGCTGTGCAGCCACGACGTACTATCCATGTGTCCAGGAATTAGCAGTGCCTGAACAGAAACTCTATGCTGAAGATATGGCTTTTGGAGCTTCAACTTTTCCACCTCAGTATTTATCTCCTGAGATCCCTCTTCATCCGTATGCCTATTCTCCTTACACCCTGGAGTCGTCACGAAATGTTTGCCCAGTGCCTGGCTCCCAGTATGATTACAACCAACCCAGTTGTTTCGGAGGTTTTCAAACCGTGAAGCCACGAAACGAGCACATGTGCCCTCTCCCGCAAAACACAAAAGCTCTGTTGAAGAAGAAAACCTGTGATGAGCAGAAGTTTGACACTAAGAAGACTGATGGACCTATATCATCTGATTTAAAATCAGTTAAAAGTTCACCTCGTATGTCCATTCATGCTGAGAATAGTTTGAAATCAGATGGTTATTATAAACGAACAGACAGGAAATCCAGAATCATTGAAAAAAGTGGATCTGCCTCCAAACCTGAGTTTGAATTTACCAGGTTGGATTTTCCTGAACTGCAGGGTCGAGAGAACAGTGAGATACCAGAGATACAAAAGCAGCTCAAGTGGGGGCCTTTACGCTCTGCCTCTACTGACGTTTCTCTTCTAAGAGAAGTGGGGAAACCTGCTGCAGTGTTAGCAGAGATTGATTTTGAGACTTCCAGGAAAAAACTTTATTGGGGTGAAATAGTGGTGAAAAATAATAATCGGACCGAATCTGTAACTGGTAATGCCGCTACCAGTCCCTCTTCATGTACGAGAGAATTATCTTGGACACCAATGGGTTATGTTGTTCGGCAGACATTATCTACAGAACTGTCACCAGCCCCTAAAAATGTTACTTCCATGATAAACCTAAAGATGGTTGCTTCATCAGCAGATCCTAAAAATGGTAGTATGTCATCTTCTGAAGTTTTATCTTCGGAGCCTTCGTACAAAGAGAAACAYGTTGTCCATCCTACTAAAAAGGATGCCGAGGAGTTTCCCAATCTGGCAGTTGCATCTGAAAGAAGAGACAGAGTAGAGTCACCGAGATTTCAGTCTAAACAGCAGCCACAGAATAATTTTAAAAGTAGTGGAAAGAAGAGCCAAATTCCAGTACAGTTGGATTTGGGAGGAATGCTAACCGCATTGGAAAAGAAGCAGCACTCCCAGAATGCAAAGCAGTCCTCCAAACCAGTGGTGTTCTCAGTCGGAGCAGTGCCTGTCCTCTCCAAAGACTCCATGTCAGGGAAGAAGGGCCACCGCTTTGGCCAGGTGAAGACCCCGCACAATCCCTTAGACTCCAGCGCCCCCCTGATGAAGAAGGGGAAGCAGAGGGAGGTCCCCAAGGCCAAGAAGCCAACCTCGTTGAAGAAGATTATTTTGAAAGAGCGGCAGGAGAGAAAGCAGCAGCGTCTCCAAGAAAATGCTGTGAGCCCAGCTTTTGCCAGTGACGATGTGCAAGATGGAGAGAGCGGTGGTGACGACCAGGCCCTCGGGCAGCCTGACCCCTCAGGGGGAATGGAAGAGTTGGTGTCCTGTGCTTCTGTGGCAGAGAGCAAGTCAGAAGACCGGCTGGGAGCTGAGCCCCAGAAGGAGGTGGAGGCCTGCCCCAAGATCCACAGCCGGCGGTTCCGGGACTACTGCAGCCAGATGCTCAGTAAAGAAGTTGATGCTTGTGTTACGGACCTGCTGAAAGAGCTGGTTCGTTTCCAAGATCGTATGTACCAGAAAGATCCAGTTAAGGCTAAGACCAAACGCCGACTTGTGTTGGGGCTGAGGGAGGTTCTCAAACATCTGAAGCTCAAAAAGTTGAAATGCATCATCATCTCCCCCAACTGTGAGAAGATACAGTCGAAAGGTGGGCTGGACGACACCCTGCACACCATCATTGACTACGCCTGTGAGCAGAACATCCCCTTTGTGTTTGCTCTCAACCGCAAAGCTCTGGGGCGCAGTCTGAACAAGGCTGTTCCTGTCAGCGTGGTGGGGATCTTTAGCTACGACGGGGCCCAGGACCAGTTCCACAAGATGGTCGAGCTGACGATGGCGGCCCGGCAGGCGTACAGGACCATGCTGGAGAATGCGCACTGGGAGCTGCCGGGAGAGCCTGGGCCCCTCGCACCCGCTAGCCCGCCCACGCAGGGCCCCAGCTGCTCTGCAGAGGACAGACCCCTGGCCCCTGCCGGAAAAGAGGAGCCACGCTACATTGAAATCTGGAGAAACCATCTGGAAGCATACACTCAATGTGCCCTGGAACTGGAGGAATCGCTGGAGGCTTCGACCTCTCAGATGATGAACTTGAATTTATAA

Related Sequences

bmy_07978T0 Protein

Length: 866 aa      View alignments
>bmy_07978T0
QAGSRAGPGRVFVTHFLESAPKVEKRGGGASRFGSASRRTTGLPGQASSQPPAMASAGRREPAGEGIKLSADVKPFVPKFAGLSVAWSESSEARVFPSCAATTYYPCVQELAVPEQKLYAEDMAFGASTFPPQYLSPEIPLHPYAYSPYTLESSRNVCPVPGSQYDYNQPSCFGGFQTVKPRNEHMCPLPQNTKALLKKKTCDEQKFDTKKTDGPISSDLKSVKSSPRMSIHAENSLKSDGYYKRTDRKSRIIEKSGSASKPEFEFTRLDFPELQGRENSEIPEIQKQLKWGPLRSASTDVSLLREVGKPAAVLAEIDFETSRKKLYWGEIVVKNNNRTESVTGNAATSPSSCTRELSWTPMGYVVRQTLSTELSPAPKNVTSMINLKMVASSADPKNGSMSSSEVLSSEPSYKEKHVVHPTKKDAEEFPNLAVASERRDRVESPRFQSKQQPQNNFKSSGKKSQIPVQLDLGGMLTALEKKQHSQNAKQSSKPVVFSVGAVPVLSKDSMSGKKGHRFGQVKTPHNPLDSSAPLMKKGKQREVPKAKKPTSLKKIILKERQERKQQRLQENAVSPAFASDDVQDGESGGDDQALGQPDPSGGMEELVSCASVAESKSEDRLGAEPQKEVEACPKIHSRRFRDYCSQMLSKEVDACVTDLLKELVRFQDRMYQKDPVKAKTKRRLVLGLREVLKHLKLKKLKCIIISPNCEKIQSKGGLDDTLHTIIDYACEQNIPFVFALNRKALGRSLNKAVPVSVVGIFSYDGAQDQFHKMVELTMAARQAYRTMLENAHWELPGEPGPLAPASPPTQGPSCSAEDRPLAPAGKEEPRYIEIWRNHLEAYTQCALELEESLEASTSQMMNLNL*