Sequence detailsbmy_07996 (Coding sequence)

Part of scaffold_344 (SequenceType object (1))

For more information consult the page for scaffold_344 (SequenceType object (1))

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

MCF2ENSTTRG00000003399 (Bottlenosed dolphin)

Gene Details

MCF.2 cell line derived transforming sequence

External Links

Gene match(Ensembl Protein ID:ENSTTRP00000003188, Bottlenosed dolphin)

Protein Percentage 93.62%
cDNA percentage 95.93%
Ka/Ks Ratio 0.63183 (Ka = 0.0372, Ks = 0.0589)

MCF2ENSBTAG00000004007 (Cow)

Gene Details

Uncharacterized protein

External Links

Gene match(Ensembl Protein ID:ENSBTAP00000005233, Cow)

Protein Percentage 86.59%
cDNA percentage 90.88%
Ka/Ks Ratio 0.43602 (Ka = 0.0758, Ks = 0.1739)

MCF2 (Minke Whale)

Gene Details

MCF.2 cell line derived transforming sequence

External Links

Gene match (Identifier: BACU006454, Minke Whale)

Protein Percentage 95.16%
cDNA percentage 96.78%
Ka/Ks Ratio 0.45081 (Ka = 0.0264, Ks = 0.0585)

Additional orthologs identified in other species via the OPTIC pipeline.

MCF2 (Human)   Mcf2 (Mouse)  

Genome Location

Sequence SequenceType object (2)

Length: 2838 bp    Location:452669..390018   Strand:-
Raw sequence 
>bmy_07996
ATGGCAGAAGCAACTCCCCCGAGAGGCAAGATGAGGTTCAGAAGGAATGCGGCTTCCTTCCCTGGGAACTTGCACTTGGTTTTGGTCCTTCGCCCTACCAGTTTTCTCCAACGAACTTTCACAGACATTGGATTTCGATTTAGTCAGGAAGATTTCATACTCAAATTACCAGTTGTTATGCTGAGCTCAGTTAGTGATTTGCTGACATACATTGATGACGAGCAGTTAACCCCTGAGTTAGGCGGCACCTTGCAGTACTGCCACAGTGAATGGATCATCTTCAGAAATGCTATAGAAAATTTTGCCCTCACAGTGAAAGACATGGCTCAGATGTTACAGTCCTTTGGAACTGAACTGGCTGAGACAGAACTACCAGATGATATTCCCGCAATAGAAGAAATCCTTGCGATTCGTGCTGAAAGGTACCACCTGTTAAAGAAGGATATTACAGCTGTAACCAAAGAAGGAAAAATCCTGCTAACAAATCTGGAAGTGCCTGATGCCGAGGATGCTGTGAGTTCAAGACTTGAAAATCATCAGCAAATTTGTGGTGACTGGCAAACTATTAATAAATTGCTGACTCAAGTACATGATATGGAAATAGCTTTTGATGGATTTTGGGAAAAACACCAGCTAAAAATGGAGCAATATCTGCAACTCTGGAAGTTTGAGCAGGATTTTCAAGAGCTCGTGAGTGAAGCTGAACTTCTTTTAAACCAACAAGCAGAGTTGGCAGATGTAACAGGGAATATAGCTCAAGTAAAACAAAAAATTAAAAAGTTGGAAAACTTAGATGAAAATTCTCAGGACCTGTTAGCAAAGGCCCAGTTCGTGATACTGCATGGACACAGGCTCGCAGCAAGTCACCATTACGCCCTGGATTTGATCTGCCAGAGGTGCAATGAGCTACGTTACCTTTCTGATATTTTGGTGAATGAGATCAAAACCAAACGGATACAGCTCAGCAGGACCTTTAAAATGCATAAAATCCTACAGCAGGCTCGCCAGTGCTGTGATGAAGGAGAGTGCCTTCTGGCTAATCAAGAAATAAATAAGTTTCAGTCTAAAAAAGATGCTCAGAAAGCCCTCCAAGACATCGAAAATTTTCTTGAAATGGCTCTACCCTTTATAAATTATGATCCTGAAACCCTGCAGTATGAATTTGATGTGATTTTATCCCCTGAACTCAAGGCTCAAATGCAGACCATACAACTCAAGCTTGAAAACATCCGAAGTATATTTGAGAACCAACAAGCCGGTTTCAGAAACCTGACTGATAAGCATGTGAGGCCAATTCCATTTGTAGTACCTGCTTCTGACAGTTTGATCAGATCTAGAGAACCATTTTTTTCACCTAAACAAGTGGGAGTTGGATACTCTTTCTTTCAAGCATGTAAACTTTTTTCAAAAGGGAGGAAGACTTGGAGACAAAATCAGAGCAACATAAAAATTGAAGCGGTGCACGATTGTCAGGAGAAGAGTAGTTCTGCTCAGTCCTCCAGTTTGAACAATGGCAATAGCCTGGATGTTTTAAAGAACCACGTCCTAAATGAGCTGGTACAGACAGAGAGGGTGTATGTTCGGGAACTATTTGCTGTTTTGTTGGGCTATAGAGAGGAGATGGATAATCCAGAGATGTTTGACCTTATACCACCTCTCCTGAGAAATAAAAAGGATGTTCTCTTTGGAAATATGGCAGAAATATATGAATTCCATAACAACATTTTCATGAGCAGTCTGGAAAATTGCGTTGTTGCTCCAGAAAGAGTGGGACCTTGTTTCCTGGAAAGGAAAGATGATTTTCAAATGTATGCAAAATACTGTCAGAATAAGCCCAGGTCAGAGGCAATTTGGAGGAAGTATTCAGAATGCGCCTTTTTCCAGGAATGTCAAAGAAAATTAAAACACAGACTTGGTCTAGATTCCTATTTACTGAAACCAGTGCAACGGATTACTAAATATCAGTTACTGTTGAAGGAGCTATTAAAATATAGCAAAGACTGCGAAGGATCTGTACAATTAAAGGAGGCACTTGACATGATACTGGATTTACTGAAGTCAGTTAATGACTCAATGCATCAGATTGCAATAAATGGCTATATCGGAAACTTAAATGAGCTGGGCAAGATGATAACGCAGGGTGCATTCAGCGTTTGGATTGGACACAAGAAAGGTGCTACAAAGATGAAGGATTTTGCTAGATTCAAGCCAATGCAGCGGCACCTTTTCTTGTATGAAAAAGCCATTGTTTTTTGTAAAAGGCGTGTTGAAAGCAGAGAAGGCTCTGATCGATACCCGTCATACAGTTTTAAGCACTGTTTGAAAATGGATGAAGTTGGAATCACTGAATATGTAAAAGGAGACAACCGCAAGTTTGAAATCTGGTATGCTGGGAAGGAAGAAGTTTATATTGTCCAGGCTTCAAATGTAGATGTGAAGATGACGTGGTTAAAAGAAATCAGAATTAAAAAACAAGAACAACATAATCAGTTAATGGAACAGAATCTTTCTTCTCAGCGGAATGAAAGGCAACAGGGAGCTTTTATAGGCGCTGAGGAAACTGACTTGGAGCACACCAGCGCTATGGTGGAAGTCGGTGAGGCCATCGCGTCAGTTCGGGCAGAAGCAAATACAGTTTGGACTGAGATGTCATCACCTGCAGAAATCTCTGATGAGCCTGAGGAATGGTCCAGTAACTATTTCTACTCTTCTTATGATGACAATGAAGAAGAAAGGCCTCTAATGATTACAGTTCTTAAAAGTGCTACAGATAAACAGCACAAGAGTCAGGATGATCCTATGCTACCCATGACATTCACAGAACTTCCTCAGGACTGA

Related Sequences

bmy_07996T0 SequenceType object (3)

Length: 946 aa      View alignments
>bmy_07996T0
MAEATPPRGKMRFRRNAASFPGNLHLVLVLRPTSFLQRTFTDIGFRFSQEDFILKLPVVMLSSVSDLLTYIDDEQLTPELGGTLQYCHSEWIIFRNAIENFALTVKDMAQMLQSFGTELAETELPDDIPAIEEILAIRAERYHLLKKDITAVTKEGKILLTNLEVPDAEDAVSSRLENHQQICGDWQTINKLLTQVHDMEIAFDGFWEKHQLKMEQYLQLWKFEQDFQELVSEAELLLNQQAELADVTGNIAQVKQKIKKLENLDENSQDLLAKAQFVILHGHRLAASHHYALDLICQRCNELRYLSDILVNEIKTKRIQLSRTFKMHKILQQARQCCDEGECLLANQEINKFQSKKDAQKALQDIENFLEMALPFINYDPETLQYEFDVILSPELKAQMQTIQLKLENIRSIFENQQAGFRNLTDKHVRPIPFVVPASDSLIRSREPFFSPKQVGVGYSFFQACKLFSKGRKTWRQNQSNIKIEAVHDCQEKSSSAQSSSLNNGNSLDVLKNHVLNELVQTERVYVRELFAVLLGYREEMDNPEMFDLIPPLLRNKKDVLFGNMAEIYEFHNNIFMSSLENCVVAPERVGPCFLERKDDFQMYAKYCQNKPRSEAIWRKYSECAFFQECQRKLKHRLGLDSYLLKPVQRITKYQLLLKELLKYSKDCEGSVQLKEALDMILDLLKSVNDSMHQIAINGYIGNLNELGKMITQGAFSVWIGHKKGATKMKDFARFKPMQRHLFLYEKAIVFCKRRVESREGSDRYPSYSFKHCLKMDEVGITEYVKGDNRKFEIWYAGKEEVYIVQASNVDVKMTWLKEIRIKKQEQHNQLMEQNLSSQRNERQQGAFIGAEETDLEHTSAMVEVGEAIASVRAEANTVWTEMSSPAEISDEPEEWSSNYFYSSYDDNEEERPLMITVLKSATDKQHKSQDDPMLPMTFTELPQD*