Part of scaffold_347 (Scaffold)

For more information consult the page for scaffold_347 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

PTAFR ENSBTAG00000027051 (Cow)

Gene Details

Platelet-activating factor receptor

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000038567, Cow)

Protein Percentage 88.3%
cDNA percentage 90.64%
Ka/Ks Ratio 0.16984 (Ka = 0.0572, Ks = 0.3368)

PTAFR  (Minke Whale)

Gene Details

platelet-activating factor receptor

External Links

Gene match (Identifier: BACU003257, Minke Whale)

Protein Percentage 97.95%
cDNA percentage 98.34%
Ka/Ks Ratio 0.19307 (Ka = 0.0079, Ks = 0.041)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 1029 bp    Location:53193..52165   Strand:-
>bmy_08004
ATGGAGGCAAATGATTCCTCTCGTGTGGATTCTGAGTTCCGATACACCCTCTTCCCAATTTTTTACAGCATCATCTTTGTGTTGGGGGTCCTCGCCAACAGCTATGTGCTGTGGGTCTTTGCCCGCCTGTACCCTTCCAAGAAATTCAATGAGATAAAGATCTTCATGGTGAACCTCACCATGGCTGACCTGCTCTTCCTGGTCACCCTGCCCCTGTGGATCATCTACTACTACAACGAGGGCAACTGGATTCTTCCTGAATTCCTGTGCAACCTGGCTGGCTGCTTCTTCTTCATTAACACCTACTGCTCAGTGGCCTTTTTGGCCGTCATCACTTATAACCGCTTCCAGGCTGTAACACAGCCCATCAAGACCGTTCAGGTCACCACCCGCAAGCGTGGCATCCTTTTGTCCCTGATCATCTGGGTGACCATTGTGGCCGCTGCATCCTACTTCTTCATCCTGGACTCCACCAACACAGTGCCCAACAAGACTGGCTCGGGCAACATCACACGCTGCTTTGAGCACTACAAGAAGGGCAGCATCCCGGTCCTCATCATCCACATCTTCCTCGTGTTCAGCTTCTTCCTCGTCTTCCTCATCATCCTCGTTTGCAACCTGGTCATCATSGTCACRCTGCTCACACAGCCGGTGCAGATGCAGCACAGTGCAGAGGTCAAGTGCCGGGCACTCTGGATGGTCTGCACGGTCCTGGCTGTGTTCATCATCTGCTTTGTGCCCCACCACATTGTACAGCTGCCCTGGACCCTGGCTGAGCTGGGCTTCCAGAACAGCAACTTCCACCAGGCTATTAATGATGCACATCAGGTCACTCTCTGCCTCCTTAGTACCAACTGTGTCTTAGACCCCATCATCTACTGTTTCCTCACCAAGAAGTTCCGTAAGCACCTCACGGAGAAGTTCTACAGTATGCGCAGCAGCCGGAAATGCTCCCGGACCACCATGGAGACAGGCACCGAAGTGGTCATGCCGCTCAAACAGGTCCCGGTCAATTCCCTCAAAGATTAG

Related Sequences

bmy_08004T0 Protein

Length: 343 aa      View alignments
>bmy_08004T0
MEANDSSRVDSEFRYTLFPIFYSIIFVLGVLANSYVLWVFARLYPSKKFNEIKIFMVNLTMADLLFLVTLPLWIIYYYNEGNWILPEFLCNLAGCFFFINTYCSVAFLAVITYNRFQAVTQPIKTVQVTTRKRGILLSLIIWVTIVAAASYFFILDSTNTVPNKTGSGNITRCFEHYKKGSIPVLIIHIFLVFSFFLVFLIILVCNLVIXVTLLTQPVQMQHSAEVKCRALWMVCTVLAVFIICFVPHHIVQLPWTLAELGFQNSNFHQAINDAHQVTLCLLSTNCVLDPIIYCFLTKKFRKHLTEKFYSMRSSRKCSRTTMETGTEVVMPLKQVPVNSLKD*