Part of scaffold_347 (Scaffold)

For more information consult the page for scaffold_347 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

TRNAU1AP ENSTTRG00000001854 (Bottlenosed dolphin)

Gene Details

tRNA selenocysteine 1 associated protein 1

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000001744, Bottlenosed dolphin)

Protein Percentage 97.08%
cDNA percentage 96.47%
Ka/Ks Ratio 0.23857 (Ka = 0.0232, Ks = 0.0971)

TRNAU1AP ENSBTAG00000010393 (Cow)

Gene Details

tRNA selenocysteine 1-associated protein 1

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000013718, Cow)

Protein Percentage 96.35%
cDNA percentage 93.43%
Ka/Ks Ratio 0.1098 (Ka = 0.0272, Ks = 0.2479)

TRNAU1AP  (Minke Whale)

Gene Details

tRNA selenocysteine 1 associated protein 1

External Links

Gene match (Identifier: BACU003265, Minke Whale)

Protein Percentage 99.57%
cDNA percentage 99.42%
Ka/Ks Ratio 0.08035 (Ka = 0.0018, Ks = 0.0226)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 849 bp    Location:365083..388205   Strand:+
>bmy_08013
ATGAGGAGCCTGGATGCTGGCCTGAGCCGCTCTGCTCTTGTGTTTACGCAGCTGGAACCCTACATGGATGAGAACTTCATCTCCAGAGCCTTTGCCACCATGGGGGAGACCGTGATGAGCGTCAAAATTATCCGAAACCGCCTCACTGGGATCCCAGCTGGCTACTGCTTTGTAGAATTCGCAGATTTGGCCACAGCTGAGAAGTGTTTGCATAAAATCAACGGGAAACCCCTTCCAGGAGCCACACCTGCAAAACGTTTTAAACTGAACTATGCCACTTATGGGAAACAGCCAGATAACAGCCCCGAGTACTCCCTCTTTGTGGGGGACCTGACCCCAGATGTGGATGATGGCATGCTGTATGAATTCTTCGTCAAAGTCTACCCCTCCTGTCGGGGAGGCAAGGTGGTTTTGGACCAGACAGGAGTGTCTAAGGGCTATGGTTTTGTGAAATTCACAGATGAGCTGGAACAGAAGCGAGCCCTGACAGAGTGCCAGGGAGCAGTTGGACTGGGGTCTAAACCAGTGCGTCTGAGTGTGGCAATCCCTAAAGCTTACAGCTACAACCAGTATTACCAGCAGTACCAGAACTACTATGCCCAGTGGGGCTATGACCAGAACACAGGCAGCTACAGCTACAGTTATCCCCAGTATGGCTATACCCAGAGCACCATGCAGACATATGAAGAAGTCGGAGATGATGCATTGGAAGACCCCATGCCACAGCTGGATGTGACTGAGGCCAACAAGGAGTTCATGGAGCAGAGCGAGGAGCTGTATGACGCGCTGATGGACTGTCACTGGCAGCCCCTGGACACAGTGTCTTCCGAGATCCCTGCCGTGATGTAG

Related Sequences

bmy_08013T0 Protein

Length: 283 aa      View alignments
>bmy_08013T0
MRSLDAGLSRSALVFTQLEPYMDENFISRAFATMGETVMSVKIIRNRLTGIPAGYCFVEFADLATAEKCLHKINGKPLPGATPAKRFKLNYATYGKQPDNSPEYSLFVGDLTPDVDDGMLYEFFVKVYPSCRGGKVVLDQTGVSKGYGFVKFTDELEQKRALTECQGAVGLGSKPVRLSVAIPKAYSYNQYYQQYQNYYAQWGYDQNTGSYSYSYPQYGYTQSTMQTYEEVGDDALEDPMPQLDVTEANKEFMEQSEELYDALMDCHWQPLDTVSSEIPAVM*