Sequence detailsbmy_08035 (Coding sequence)

Part of scaffold_349 (SequenceType object (1))

For more information consult the page for scaffold_349 (SequenceType object (1))

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

CALB1 (Minke Whale)

Gene Details

calbindin 1, 28kDa

External Links

Gene match (Identifier: BACU009433, Minke Whale)

Protein Percentage 77.54%
cDNA percentage 77.78%
Ka/Ks Ratio 0.39067 (Ka = 0.1484, Ks = 0.3799)

Additional orthologs identified in other species via the OPTIC pipeline.

CALB1 (Cow)   CALB1 (Human)   Calb1 (Mouse)  

Genome Location

Sequence SequenceType object (2)

Length: 786 bp    Location:748763..771145   Strand:+
Raw sequence 
>bmy_08035
ATGGCAGAATCCCACCTGCAATCATCCCTGATCACAGCCTCACAGTTTTTCGAGATCTGGCTTCATTTCGACGCTGACGGAAGTGGTTACCTGGAAGGAAAAGAGCTTCAGAACTTGATTCAGGAGCTCCAGCAGGCGCGGAAGAAGGCTGGATTGGAGTTATCACCTGAGATGAAAACTTTTGTGGATCAGTATGGGCAAAAAGATGATGGAAAAATAGGAATTGTAGAGTTGGCTCATGTATTACCCACAGAAGAGAACTTCCTGCTGCTCTTCCGATGCCAGCAGCTGAAGTCCTGTGAGGAATTCATGAAGACATGGAGAAAATATGATACTGATCACAGTGGCTTCATAGAAACTGAAGAGCTTAAGAACTTTCTAAAGGACCTGCTGGAAAAAGCAAACAAGACTGTTGATGATACAAAACTAGCTGAGTATACAGACCTAATGCTGAAATTGTTTGATTCAAATAATGATGGGAAGCTGGAATTAACTGAGATGGCCAGGTTACTGCCAGTGCAGGAGAATTTTCTTCTTAAATTTCAGGGAGTCAAAATGTGTGGGAAAGAGTTCAATAAAGCTTTTGAGTTATACGATCAGGATGGCAATGGATACATAGATGAAAATGAACTGGATGCTTTACTGAAGGATCTATGTGAGAAGAATAAACAGGATCTGGATATTAATAATATTCCAACATACAAGAAAAGCATAATGGCTTTATCGGATGGAGGGAAGCTGTACCGAACGGATCTTGCTCTTATTCTCTCTGCTGGGGACAACTAG

Related Sequences

bmy_08035T0 SequenceType object (3)

Length: 262 aa      
>bmy_08035T0
MAESHLQSSLITASQFFEIWLHFDADGSGYLEGKELQNLIQELQQARKKAGLELSPEMKTFVDQYGQKDDGKIGIVELAHVLPTEENFLLLFRCQQLKSCEEFMKTWRKYDTDHSGFIETEELKNFLKDLLEKANKTVDDTKLAEYTDLMLKLFDSNNDGKLELTEMARLLPVQENFLLKFQGVKMCGKEFNKAFELYDQDGNGYIDENELDALLKDLCEKNKQDLDINNIPTYKKSIMALSDGGKLYRTDLALILSAGDN*