Part of scaffold_341 (Scaffold)

For more information consult the page for scaffold_341 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

COL5A2 ENSTTRG00000010401 (Bottlenosed dolphin)

Gene Details

collagen, type V, alpha 2

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000009875, Bottlenosed dolphin)

Protein Percentage 90.12%
cDNA percentage 92.03%
Ka/Ks Ratio 0.82163 (Ka = 0.0803, Ks = 0.0978)

COL5A2 ENSBTAG00000027020 (Cow)

Gene Details

Uncharacterized protein

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000038495, Cow)

Protein Percentage 89.42%
cDNA percentage 88.17%
Ka/Ks Ratio 0.30867 (Ka = 0.0821, Ks = 0.2658)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 3993 bp    Location:508932..619849   Strand:+
>bmy_08055
ATGAGGCTTTTCTTCCTTCTCCTCCTCCTCCTCCTCTATCTCTTCTACCCACCACCCCCATCTCCTTACCCAAGAGATTTTGCTGGGGTGCTGGAATATTGGGTAAGACTTGTAGACGGATTTGAAGAAGGATATGGTGAAGAAATAGCCTGCACTCAGAATGGTCAGATGTACTTAAACAGGGACATTTGGAAACCTGCCCCTTGCCAAATCTGTGTCTGTGACAATGGCGCCATTCTTTGTGACAAGATACAGTGCCAGGATGTGCTTGAATGTGCCGACCCCATAACTCCTCCTGGGGAGTGCTGTCCTGTCTGTCCACATACAACTGGAAGTAGCAATACCAATTTTGGTAGAGGAAGAAAGGGACAAAAAGGAGAACCAGGGTTAGTGCCTGTTGTAACAGGCATACGTGGACGTCCAGGACCCTCAGGACCTCCAGGATCACAGGGACCAAGAGGAGAGAGAGGCCCAAAAGGAAAACCTGGTCCTCGTGGTCCTCAGGGAATCGATGGAGAACCAGGTGTTCCTGGTCAACCGGGTGCCCCAGGACCTCCTGGACATCCATCTCACCCAGGACCCGATGGCCTGAGCAGGCCGTTTTCAGCTCAGATGGCTGGGTTGGATGAAAAGTCTGGACTTGGGAGTCAAGTAGGACTGATGCCTGGCTCTGTGGGTCCTGTTGGCCCAAGGGGACCTCAAGGTTTACAAGGACAGCAGGGTGGTACTGGCCCTACAGGACCTCCTGGTGAGCCTGGTGACCCTGGACCAATGGTAAATGTCAAGGTCCACTTGGCACACGTGGACCAGAGGGCCCTCCTGGAAAACCTGGGTGAGCCTGGTAGAAATGGAAAAGCTGGTGAAGTAGGATTTGCAGGATCTCCGGGAGCTCGAGGATTTCCTGGGGCTCCTGGTCTTCCAGGCCTGAAGGGTCACCGAGGACACAAAGGTCTTGAAGGCCCTAAAGGTGAACTTGGAGCAATCGGTTCCAAGGGTGAAGCTGGCCCTACTGGTCCAATGGGTGCCATGGGTCCAATGGGCCCAAGAGGAATGCCAGGAGAGAGAGGGAGACTTGGGCCACAGGGTGCTCCTGGTCCTCTTGGGATATCTGGTTCCTCTGGTTTTCCAGGAAATCCTGGGATGAAGGGAGAAGCAGGTCCCACTGGGGCACGAGGCCCTGAAGGTCCTCAGGGGCAAAGAGGTGAAACTGGGCTACCGGGTCCTGTTGGCTCTCAAGGTCTTCCTGGTGCAGTGGGAACTGATGGTACGCCTGGTGCCAAAGGCCCAACAGGCTCTCCGGGTACCTCTGGTCCTCCTGGCTTAGCAGGGCCCCCTGGATCTCCAGGACCTCAGGGTAGCACTGGACCTCCAGGAATTCGAGGCCAACCGGGTGATCCAGGAGTTCCAGGTTTCAAAGGAGAAGCTGGCCCAAAAGGGGAACCGGGGCCACATGGTATTCAGGGTCCAATAGGCCCACCTGGTGAAGAAGGCAAACGAGGTCCCCGAGGTGATCCAGGAACAGTTGGTCCTCCAGGCCCCATGGGAGAAAGGGGTGCTCCTGGCAATCGTGGTTTTCCAGGCTCTGATGGTTTACCTGGACCAAAGGGGGCTCAAGGAGAGAGGGGTCCTGTAGGTTCTTCAGGACCTAAAGGAGGTCAGGGGGATCCAGGACGTCCGGGGGAACCTGGGCTTCCAGGTGCTCGGGGTCTGACAGGAAATCCTGGTGTTCAAGGTCCTGAAGGAAAACTTGGACCTTTGGGTGACCCTGGAAAACCTGGAGAAGCAGGAAATGCTGGTGTTCCTGGGCAGAGGGGAGCTCCTGGAAAAGATGGTGAAGTTGGTCCTTCCGGTCCTGTGGGCCCCCCGGGTCTAGCTGGGGAGAGAGGAGAGCAAGGCCCTCCAGGCCCCACTGGCTTTCAGGGAGTTCCTGGAGATCCTGGAGCAGTTGGCCCCTTAGGACCTAGAGGAGAACGAGGAAATCCAGGGGAAAGAGGAGAACCAGGAATAACCGGACTTCCTGGTGAGAAGGGAATGGCTGGAGGGCACGGTCCTGATGGTCCAAAAGGTCTTCCGGGTCCCTTGGGTCCTCCCGGTCCTGCAGGTCCTACTGGAGAAAAGGGAGAACCTGGCCCTCGAGGTTTAGTTGGCCCACCTGGCTCCCGTGGAAATCCTGGTTCTCGTGGTGAAAATGGCCCAACTGGAGCCGTTGGTTTTGCTGGACCCCAGGGTCCTGATGGGCAGCCTGGAGTAAAAGGTGAACCTGGAGAGCCAGGACAGAAGGGCGATGCTGGCTCTCCTGGACCACAAGGTCTAGCAGGATCCCCAGGCCCTCATGGTCCTAATGGCGTTCCTGGACTAAAAGGTGGTCGAGGAACTCAGGGTCCACCTGGTGCTACAGGATTTCCTGGTTCTGCTGGCAGAGTTGGACCTCCAGGTCCTACTGGAGCTCCAGGACCTGCAGGGCCCTTAGGGGAACCTGGGAAGGAGGGACCTCCAGGTCTTCGTGGGGACCCCGGCTCTCACGGACGACTAGGAGATCGAGGACCAGCTGGCCCCCCTGGTGGCCCAGGAGACAAAGGGGACCCAGGAGAAGATGGGCAACCTTTTGTCCTCAAAATTAGGGTCCAGATGGTCCCCCTGGTCCAGCTGGAACAACTGGGCAAAGAGGAATCGTCGGCATGCCGGGGCAGCGTGGAGAGCGAGGGATGCCCGGCCTTCCAGGCCCAGCAATTAAAAATATCCATGGAGCTAGAGAAGGAGGATAATCTCCTGGGCACACCAGGAAAAGTAGGACCAACTGGTGCACCAGGAGATAAAGGCCCGCCTGGACCAGTGGGGCCCCCAGGCTCAAATGGCCCTGTGGGAGAACCAGGACCTGAAGGTCCAGCTGGTAATGATGGTACTCCAGGACGGGATGGTGCTATTGGAGAACGTGGTGATCGTGGAGACCCTGGGCCTGCAGGTCTGCCAGGCTCTCAGGGTGCCCCTGGAACTCCCGGTCCTGTTGGTGCTCCAGGAGATGCAGGACAAAGAGGAGATCCGGGTTCTCGGGGTCCTATTGGGCCACCTGGTCGAGCTGGGAAACGTGGCTTACTTGGACCCCAAGGACCTCGAGGTGACAAAGGTGATCATGGAGACCGAGGTGACCGAGGTCAGAAGGGTCACAGAGGCTTTACTGGTCTTCAAGGTCTTCCTGGACCTCCTGGTCCCAATGGTGAACAAGGCAGTGCTGGAATCCCAGGACCATTTGGCCCAAGAGGTCCTCCAGGCCCAGTTGGTCCTTCAGGTAAAGAAGGAAACCCTGGGCCACTTGGGCCCATCGGGCCTCCTGGTGTACGAGGCAGTGTCGGAGAAGCAGGCCCTGAGGGTCCTCCTGGCGAGCCTGGTCCCCCTGGCCCTCCGGGTCCCCCTGGCCACCTTACAGCTGCTCTCGGGGATATCATGGGGCACTATGATGAGAGCATGCCAGATCCACTTCCAGAGTTTACTGAAGATCAGGCAGCTCCTGATGACAAAAACAAAACGGACCCAGGGGTGCATGCTACCCTGAAGTCACTCAGTAGTCAGATCGAAACCATGCGCAGCCCTGATGGCTCCAGAAAGCACCCAGCCCGAACTTGTGATGACTTAAAGCTTTGCCATTCTGCAAAGCAGAGCGGTGAGTACTGGATTGATCCTAACCAGGGATCTGTTGAAGATGCAATCAAAGTTTACTGCAACATGGAAACAGGAGAAACATGTATTTCAGCAAACCCATCCAGTGTACCTCGTAAAACCTGGTGGGCCAGCAAATCTCCTGATAATAAGCCTGTTTGGTATGGTCTTGATATGAATAGAGGATCTCAGAAACGAAATGGAAATGTGGGCAAGACCATCTTTGAATATAGAACACAGAATGTGGCACGCTTGCCCATTATAGATCTTGCCCCTGTGGATGTCGGCAGTACAGACCAAGAATTTGGCATCGAAGTTGGGCCAGTTTGTTTTGTGTGA

Related Sequences

bmy_08055T0 Protein

Length: 1331 aa      View alignments
>bmy_08055T0
MRLFFLLLLLLLYLFYPPPPSPYPRDFAGVLEYWVRLVDGFEEGYGEEIACTQNGQMYLNRDIWKPAPCQICVCDNGAILCDKIQCQDVLECADPITPPGECCPVCPHTTGSSNTNFGRGRKGQKGEPGLVPVVTGIRGRPGPSGPPGSQGPRGERGPKGKPGPRGPQGIDGEPGVPGQPGAPGPPGHPSHPGPDGLSRPFSAQMAGLDEKSGLGSQVGLMPGSVGPVGPRGPQGLQGQQGGTGPTGPPGEPGDPGPMVNVKVHLAHVDQRALLENLGEPGRNGKAGEVGFAGSPGARGFPGAPGLPGLKGHRGHKGLEGPKGELGAIGSKGEAGPTGPMGAMGPMGPRGMPGERGRLGPQGAPGPLGISGSSGFPGNPGMKGEAGPTGARGPEGPQGQRGETGLPGPVGSQGLPGAVGTDGTPGAKGPTGSPGTSGPPGLAGPPGSPGPQGSTGPPGIRGQPGDPGVPGFKGEAGPKGEPGPHGIQGPIGPPGEEGKRGPRGDPGTVGPPGPMGERGAPGNRGFPGSDGLPGPKGAQGERGPVGSSGPKGGQGDPGRPGEPGLPGARGLTGNPGVQGPEGKLGPLGDPGKPGEAGNAGVPGQRGAPGKDGEVGPSGPVGPPGLAGERGEQGPPGPTGFQGVPGDPGAVGPLGPRGERGNPGERGEPGITGLPGEKGMAGGHGPDGPKGLPGPLGPPGPAGPTGEKGEPGPRGLVGPPGSRGNPGSRGENGPTGAVGFAGPQGPDGQPGVKGEPGEPGQKGDAGSPGPQGLAGSPGPHGPNGVPGLKGGRGTQGPPGATGFPGSAGRVGPPGPTGAPGPAGPLGEPGKEGPPGLRGDPGSHGRLGDRGPAGPPGGPGDKGDPGEDGQPFVLKIRVQMVPLVQLEQLGKEESSACRGSVESEGCPAFQAQQLKISMELEKEDNLLGTPGKVGPTGAPGDKGPPGPVGPPGSNGPVGEPGPEGPAGNDGTPGRDGAIGERGDRGDPGPAGLPGSQGAPGTPGPVGAPGDAGQRGDPGSRGPIGPPGRAGKRGLLGPQGPRGDKGDHGDRGDRGQKGHRGFTGLQGLPGPPGPNGEQGSAGIPGPFGPRGPPGPVGPSGKEGNPGPLGPIGPPGVRGSVGEAGPEGPPGEPGPPGPPGPPGHLTAALGDIMGHYDESMPDPLPEFTEDQAAPDDKNKTDPGVHATLKSLSSQIETMRSPDGSRKHPARTCDDLKLCHSAKQSGEYWIDPNQGSVEDAIKVYCNMETGETCISANPSSVPRKTWWASKSPDNKPVWYGLDMNRGSQKRNGNVGKTIFEYRTQNVARLPIIDLAPVDVGSTDQEFGIEVGPVCFV*