Part of scaffold_341 (Scaffold)

For more information consult the page for scaffold_341 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

COL3A1 ENSTTRG00000010362 (Bottlenosed dolphin)

Gene Details

collagen, type III, alpha 1

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000009852, Bottlenosed dolphin)

Protein Percentage 74.04%
cDNA percentage 80.49%
Ka/Ks Ratio 0.68412 (Ka = 0.2143, Ks = 0.3132)

BT.64714 ENSBTAG00000021466 (Cow)

Gene Details

collagen alpha-1(III) chain precursor

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000028617, Cow)

Protein Percentage 71.4%
cDNA percentage 76.86%
Ka/Ks Ratio 0.50021 (Ka = 0.2435, Ks = 0.4867)

Genome Location

Sequence Coding sequence

Length: 4527 bp    Location:670171..632449   Strand:-
>bmy_08056
ATGACGAGCTTTGTGCAAAAGGGGACCTGGTTACTTTTCGCTCTGCTTCATCCCACTGTTATTCTGGCACAACAGGAAGTTGTTGAAGGAGGATGCTCCCATCTTGGTCAGTCCTACGCGGATAGAGATGTCTGGAAACCAGAACCATGCCAAATATGTGTCTGTGACTCAGGATCTGTTCTTTGTGATGACATAATATGTGATGACCAAGAATTAGACTGTCCCAACCCCGAGATCCCATTTGGAGAATGTTGTGCAGTTTGCCCACAGCCTCCAACAGCTCCCACTCGCCCTCCTAATGGTCATGGACCTCAAGGACCCAAAGGAGATCCAGGTCCTCCTGGTATTCCTGGGAGAAATGGTGATCCTGGTCTTCCAGGCCTGCCAGGTTCCCCTGGTTCTCCGGGCCCTCCTGGAATCTGTGAATCATGCCCTACTGGTAACCAGAACTATTCTCCCCAGTATGAGGCATATGATGTCAAGTCTGGAGTAGCAGGAGGAGGACTCACAGGCTATCCCGGGCCAGCTGGTCCACCCGGCCCACCCGGTCCCCCTGGTGCATCTGGTCATCCTGGTTCCCCTGGTTCTCCAGGATACCAAGGTCCCCCTGGTGAACCTGGGCAAGCTGGTCCTTCAGGTCCTCCAGGACCTCCTGGTGCTATAGGTCCATTAGGTCCTGCCGGAAAGGATGGGGAATCAGGAAGACCCGGACGACCTGGAGAGCGAGGATTGCCTGGCCCTCCAGGTGTCAAAGGTCCAGCTGGCATGCCTGGATTCCCTGGTATGAAAGGACATAGGATCTTAATATTTTTACTACTTTTATCTATTTCAAAGGGCTTTGATGGACGAAACGGAGAAAAAGGCGAACAAGGTGCTCCTGGATTAAAGGGTGAAAATGGCCTTCCAGGTGAAAATGGATCTCCTGGAGCGATGGGTCCAAGAGGGCCTGCTGGTGAGAGAGGACGACCAGGACTTCCTGGAGCTGCAGGGGCTCGAGGTAATGATGGAGCTCGAGGAAGTGATGGACAACCAGGTCCCCCTGGTCCCCCTGGAACTGCAGGATTCCCTGGTTCCCCTGGTGCTAAGGGTGAAGTTGGACCTGCGGGATCTCCTGGTTCAAGTGGCTCCCCTGGACAAAGAGGAGAACCTGGACCTCAGGGACATGCTGGTGCTCCAGGTCTTCCTGGCCCTCCTGGGAATAATGGTAGTCCTGGTGGTAAAGGTGAAATGGGTCCTGCTGGCATTCCTGGGGCTCCTGGACTGATAGGAGCCCGCGGTCCTCCAGGACCCTCTGGTACCAATGGTGCTCCCGGGCAGCGAGGTGCTGCAGGTGAACCCGGTAAGAATGGGGCCAAAGGAGAGCCAGGACCACGTGGTGAACGCGGGGAAGCTGGTTCTCCAGGTATTCCAGGACTTAAGGGTGAAGATGGCAAAGACGGTTCTCCTGGAGAACCTGGTGCGAACGGACTTCCCGGAGCTGCAGGAGAAAGGGGTATGCCTGGATTCCGAGGACCTACTGGAGCAAATGGCCTTCCAGGAGAAAAGGGTCCCCCCGGGGAGCGTGGTGGTCCAGGCCCTGCAGGGCCCAGAGGAGTTGCTGGAGAACCTGGCCGAGACGGCCTCCCTGGAGGTCCAGGATTGAGGGGTATGCCCGGTAGTCCTGGAGGACCAGGCAGCGATGGGAAACCAGGGCCTCCCGGAAGTCAAGGAGAAAGTGGTCGACCAGGTCCTCCAGGCTCACCTGGTTCCCGAGGTCAGCCTGGTGTCATGGGTTTCCCTGGTCCTAAAGGAAATGATGGTGCTCCTGGAAAGAATGGAGAACGTGGTAGTCCTGGAGGTCCTGGCCTTCAGGGTCCTGCTGGAAAGAATGGTGAGACTGGACCTCAGGGTCCCCCAGGACCTACCGGACCAGGTGGTGACAAAGGAGACACAGGACCCCCTGGTCCACAAGGATTACAAGGCTTGCCTGGAACGAGTGGTCCTCCAGGAGAAAATGGAAAACCTGGTGAACCTGGCCCAAAGGGTGAGGCTGGTGCACCTGGAACTCCAGGAGGCAAGGGATATTCCATTTTCCTACTACAGGGTGATTCTGGTGCCCCCGGTGAACGAGGACCTACTGGACCTGCAGGGCCCCCCGGGCCTAGAGGGGGAACTGGCCCCCCTGGTTCCGAAGGAGGAAAGGGTGCTGCTGGTTCCCCTGGGCCACCTGGTAATGCTGGTTCACCTGGTCTGCAAGGAATGCCTGGAGAAAGAGGGGGTCCTGGAGGCCCTGGTCCAAAAGGTGACAAGGGTGAGCCCGGCAGTTCAGGTGTCGATGGTGCTCCAGGGAAAGATGGTCCAAGGGGTCCTACTGGTCCCATTGGTCCCCCTGGCCCAGCTGGTCAGCCTGGAGATAAGGGTGAAAGTGGTGCCCCTGGACTTCCGGGTATAGCTGGTCCTCGTGGTGGCCCTAAGTTATACAAGGTGAGAGAGGTGAACATGGGCCACCAGGACCTGCCGGCTTCCCTGGTGCTCCTGGCCAGAACGGTGAGCCTGGTGGTAAAGGTGAAAGAGGCGCTCCTGGTGAGAAAGGTGAAGGAGGCCCTCCTGGAGTTGCAGGGCCCCCCGGAAGTGCTGGGCCTTCCGGTTCCCCTGGTGCCCCAGGTGTCAAAGGTGAACGTGGCAGTCCTGGTGGTCCTGGTGCTGCTGGCTTCCCTGGTGGTCGTGGTCTTCCTGGTCCTCCTGGCAATAATGGTAACCCAGGCCCCCCAGGCCCCAGTGGTCCTCCAGGCAAAGATGGCCCCACAGGTCCAGCTGGTAGTAATGGTGCTCCTGGCAGCCCTGGGGTGTCTGGACCAAAGGGTGATGCTGGACAACCGGGTGAGAAGGGACCACCTGGCTCCCAGGGCCTTCCGGGAGTTCCAGGCCCACTTGGACTTGCAGGGATTGCTGGAGCACGAGGTCTTGCAGGCCCACCAGGCATGCCAGGTGGTAGGGGCAGCCCCGGCCCACAGGGCCCCAAGGGTGAAAATGGGAAACCAGGAGCTAGTGGTCTCAATGGAGAACGTGGTCCTCCTGGAGCCCAGGGTCTTCCTGGTCTGGCTGGTGCAGCTGGTGAACCTGGAAGAGATGGAAACCCTGGATCAGATGGTCTGCCAGGCCGAGATGGATCTCCTGGTAGCAAGGGTGACCGTGGTGAAAATGGCTCTCCTGGCCCCCCTGGTGCTCCTGGTCATCCAGGCCCGCCTGGCCCTGTCGGTGCAGCTGGAAAGAGTGGTGACAGAGGAGAAACTGGCCCTGCTGGTCCTTCTGGTGCCCCAGGTCCTGTTGGTTCAAGAGGTCCTCCTGGTCCCCAAGGCCCACGTGGTGACAAAGGTGAAACGGGTGAACGTGGTACTAATGGCATCAAAGGACATCGCGGATTCCCTGGTAACCCAGGTGCCCCAGGTTCCCCGGGTCCCTCTGGTCACCAAGGTGCAGTCGGTAGTCCAGGACCTGCAGGCCCCAGAGTACGTACCACAGAAAGATATTGGAAGGGACCTGCTGGACCCAGTGGGCCCCCTGGCAAAGATGGAACAAGTGGACACCCTGGTCCCATCGGACCACCAGGGCCTCGAGGTAACAGAGGCGAAAGAGGATCTGAGAAACACTTTACAATATTTTAAAACTGAGATAGGCTCCCCAGGCCACCCAGGACAACCAGGCCCTCCTGGGCCCCCTGGTGCCCCTGGTCCATGCTGTGGTGGTGGGGTTGCTGCCATCGCTGGCATTGGAGGTGAAAAATCTGGTGGTTTTGCCCCATATTATGGAGATGAACCAATGGATTTCAAAATCAACACCGACGAGATTATGACTTCACTCAAATCAGTCAATGGACAAATAGAAAGCCTCCTTAGTCCTGATGGTTCTCGTAAAAACCCTGCTCGGAACTGCAGAGACCTGAAATTCTGCCATCCTGAACTCAAGAGTGGAGAATATTGGGTTGATCCTAACCAAGGTTGCAAGATGGACGCTATTAAAGTATACTGTAACATGGAAACTGGGGAAACGTGCATAAATGCCAGTCCTTTGACTGTTCCACGTAAGAACTGGTGGACAAATTCTGCTGCTGAGAAGAAACATGTTTGGTTTGGAGAATCCATGGATGGTGGTTTTCAGTTTAGCTATGGCAATCCTGAACTTCCTGAAGATGTCCTCGATGTCCAGCTGGCATTCCTCCGACTTCTCTCCAGCCAGGCCTCCCAGAACATCACATATCACTGCAAGAATAGCATTGCATACATGGATCATGCCAGTGGGAATGTGAAGAAAGCCTTGAGGCTGATGGGCTCAAATGAAGGCGAATTCAAGGCTGAAGGAAATGGCAAATTCACCTACTCAGTTCTGGAGGATGGTTGCACCAAACACACTGGGGAATGGGGCAAAACAGTCTTCGAATATCGAACACGCAAGGCCGTCAGACTACCTATTGTAGATATTGCACCCTACGATATTGGTGGTCCTGATCAAGAATTTGGTGTGGACGTTGGCCCTGTTTGCTTTTTATAA

Related Sequences

bmy_08056T0 Protein

Length: 1509 aa      View alignments
>bmy_08056T0
MTSFVQKGTWLLFALLHPTVILAQQEVVEGGCSHLGQSYADRDVWKPEPCQICVCDSGSVLCDDIICDDQELDCPNPEIPFGECCAVCPQPPTAPTRPPNGHGPQGPKGDPGPPGIPGRNGDPGLPGLPGSPGSPGPPGICESCPTGNQNYSPQYEAYDVKSGVAGGGLTGYPGPAGPPGPPGPPGASGHPGSPGSPGYQGPPGEPGQAGPSGPPGPPGAIGPLGPAGKDGESGRPGRPGERGLPGPPGVKGPAGMPGFPGMKGHRILIFLLLLSISKGFDGRNGEKGEQGAPGLKGENGLPGENGSPGAMGPRGPAGERGRPGLPGAAGARGNDGARGSDGQPGPPGPPGTAGFPGSPGAKGEVGPAGSPGSSGSPGQRGEPGPQGHAGAPGLPGPPGNNGSPGGKGEMGPAGIPGAPGLIGARGPPGPSGTNGAPGQRGAAGEPGKNGAKGEPGPRGERGEAGSPGIPGLKGEDGKDGSPGEPGANGLPGAAGERGMPGFRGPTGANGLPGEKGPPGERGGPGPAGPRGVAGEPGRDGLPGGPGLRGMPGSPGGPGSDGKPGPPGSQGESGRPGPPGSPGSRGQPGVMGFPGPKGNDGAPGKNGERGSPGGPGLQGPAGKNGETGPQGPPGPTGPGGDKGDTGPPGPQGLQGLPGTSGPPGENGKPGEPGPKGEAGAPGTPGGKGYSIFLLQGDSGAPGERGPTGPAGPPGPRGGTGPPGSEGGKGAAGSPGPPGNAGSPGLQGMPGERGGPGGPGPKGDKGEPGSSGVDGAPGKDGPRGPTGPIGPPGPAGQPGDKGESGAPGLPGIAGPRGGPKLYKVREVNMGHQDLPASLVLLARTVSLVVKVKEALLVRKVKEALLELQGPPEVLGLPVPLVPQVSKVNVAVLVVLVLLASLVVVVFLVLLAIMVTQAPQAPVVLQAKMAPQVQLVVMVLLAALGCLDQRVMLDNRVRRDHLAPRAFREFQAHLDLQGLLEHEVLQAHQACQVVGAAPAHRAPRVKMGNQELVVSMENVVLLEPRVFLVWLVQLVNLEEMETLDQMVCQAEMDLLVARVTVVKMALLAPLVLLVIQARLALSVQLERVVTEEKLALLVLLVPQVLLVQEVLLVPKAHVVTKVKRVNVVLMASKDIADSLVTQVPQVPRVPLVTKVQSVVQDLQAPEYVPQKDIGRDLLDPVGPLAKMEQVDTLVPSDHQGLEVTEAKEDLRNTLQYFKTEIGSPGHPGQPGPPGPPGAPGPCCGGGVAAIAGIGGEKSGGFAPYYGDEPMDFKINTDEIMTSLKSVNGQIESLLSPDGSRKNPARNCRDLKFCHPELKSGEYWVDPNQGCKMDAIKVYCNMETGETCINASPLTVPRKNWWTNSAAEKKHVWFGESMDGGFQFSYGNPELPEDVLDVQLAFLRLLSSQASQNITYHCKNSIAYMDHASGNVKKALRLMGSNEGEFKAEGNGKFTYSVLEDGCTKHTGEWGKTVFEYRTRKAVRLPIVDIAPYDIGGPDQEFGVDVGPVCFL*