Part of scaffold_340 (Scaffold)

For more information consult the page for scaffold_340 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

MEST ENSTTRG00000004934 (Bottlenosed dolphin)

Gene Details

mesoderm specific transcript

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000004651, Bottlenosed dolphin)

Protein Percentage 88.15%
cDNA percentage 88.73%
Ka/Ks Ratio 0.39201 (Ka = 0.0438, Ks = 0.1116)

BT.22540 ENSBTAG00000017223 (Cow)

Gene Details

mesoderm-specific transcript homolog protein

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000042286, Cow)

Protein Percentage 93.38%
cDNA percentage 90.71%
Ka/Ks Ratio 0.15297 (Ka = 0.0446, Ks = 0.2914)

MEST  (Minke Whale)

Gene Details

mesoderm specific transcript

External Links

Gene match (Identifier: BACU006795, Minke Whale)

Protein Percentage 83.97%
cDNA percentage 86.88%
Ka/Ks Ratio 0.55707 (Ka = 0.1244, Ks = 0.2233)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 864 bp    Location:65916..55693   Strand:-
>bmy_08061
ATGAGGGAGTGGTGGGTCCAGGTGGGGCTGTTGGCTGTGCCTCTGCTTGCGGCCTATCTGCACATCCCGCCCCCCCAGCTTTCCCCTGCTCTTCACTCATGGAAGTCATCAGGCAAATTTTTTACCTATAAGGGACTGCGTATCTTCTACCAAGACTCTGTGGGTGTGGTTGGAAGTCCAGAGATAGTTGTGCTTTTACACGGCTTTCCAACATCCAGCTATGACTGGTACAAGATTTGGGAAGGTCTGACCCTCAGGTTTCATCGAGTGATTGCCCTTGATTTCCTAGGCTTTGGCTTCAGTGACAAACCGAGACCACATCACTATTCCATATTCGAGCAGGCCAGCATCGTGGAGGCTCTTTTGCGGCATCTGGGGCTCCAGAACCGTAGGATCAACCTGTTGTCTCACGACTATGGGGATATCGTTGCTCAGGAGCTGCTCTATAGGTTCAAGCAGAATCGATCTGGTCGGCTTACCATCAAGAGTCTCTGTCTGTCGAATGGAGGTATATTTCCTGAGACTCACCGTCCTCTCCTTCTCCAAAAGCTTCTCAAAGATGGAGGCATGCTGTCACCCATCCTCACGCGACTGATGAACTTCTTCGTATTCTCTCGAGGAGTGAACTGTGGGACATGTGGGCAGGGATACGCAACAATGACGGGAACTTGGTTATCGACAGTTCATTTTATCTATGGGCCACTGGATCCAGTGAATCCCTATCCAGAGTTTTTGGAGCTGTACAGGAAAACGCTGCCGCGGTCCACAGTGTCGATTCTGGATGACCACATTAGCCACTATCCACAGCTAGAGGATCCCATGGGCTTCTTGAATGCATATATGGGCTTCATCAACTCCTTCTGA

Related Sequences

bmy_08061T0 Protein

Length: 288 aa      View alignments
>bmy_08061T0
MREWWVQVGLLAVPLLAAYLHIPPPQLSPALHSWKSSGKFFTYKGLRIFYQDSVGVVGSPEIVVLLHGFPTSSYDWYKIWEGLTLRFHRVIALDFLGFGFSDKPRPHHYSIFEQASIVEALLRHLGLQNRRINLLSHDYGDIVAQELLYRFKQNRSGRLTIKSLCLSNGGIFPETHRPLLLQKLLKDGGMLSPILTRLMNFFVFSRGVNCGTCGQGYATMTGTWLSTVHFIYGPLDPVNPYPEFLELYRKTLPRSTVSILDDHISHYPQLEDPMGFLNAYMGFINSF*