Sequence detailsbmy_08070 (Coding sequence)

Part of scaffold_340 (SequenceType object (1))

For more information consult the page for scaffold_340 (SequenceType object (1))

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

SSMEM1ENSTTRG00000011324 (Bottlenosed dolphin)

Gene Details

serine-rich single-pass membrane protein 1

External Links

Gene match(Ensembl Protein ID:ENSTTRP00000010729, Bottlenosed dolphin)

Protein Percentage 93.96%
cDNA percentage 96.7%
Ka/Ks Ratio 0.45334 (Ka = 0.0269, Ks = 0.0592)

MGC127766ENSBTAG00000013473 (Cow)

Gene Details

uncharacterized protein C7orf45 homolog

External Links

Gene match(Ensembl Protein ID:ENSBTAP00000017917, Cow)

Protein Percentage 80.0%
cDNA percentage 90.0%
Ka/Ks Ratio 1.07446 (Ka = 0.1138, Ks = 0.1059)

Additional orthologs identified in other species via the OPTIC pipeline.

SSMEM1 (Human)   Ssmem1 (Mouse)  

Genome Location

Sequence SequenceType object (2)

Length: 552 bp    Location:309422..300216   Strand:-
Raw sequence 
>bmy_08070
ATGTCTGAGAAGAAAAAGAATGGAGACAATGGAACAAGCACTTCACTAAGTAAAGCAAGCAAAGATACTTCCTCTAAGCGGCAAAACAAAGATGGTGCCTGGGATTCTTTGCAAATGATGACAAAACCAAAGCAGAACCAACTTACTCTTGTAACTGACTCAGAAATGGCTTTGGTCAATGCATATCTTGAACAAAGACGAGCGAGGCACCATTCTGAATTCAGCCGGGTGAATCAGACCCAACCTGACAGTGATACTACTGAGTGTGAGAGTGAAGTATCTAACTCGGGAGCCTCCTCTTGGAAGGAGAGTGAAAGTGAACACCACCAATCACCAGCCAGTATTAAGAAGAGAAAAATAGCTCAGAGGCAAAGGAATATGAGAGGTTGCCAAATCAGGGAAAGGCCCTGCCTCCACTGCAAAGCCATGAGAACCAATGAATGGCTGACCCGCCATTTCCTTCAAAACGCTTCAGTAACAACCCCAAAGAAGGGAGATATTCAAGAAGGAAATTCTGGGTCTGGTATTAACATAAAATTCAGTAAATTTTGA

Related Sequences

bmy_08070T0 SequenceType object (3)

Length: 184 aa      View alignments
>bmy_08070T0
MSEKKKNGDNGTSTSLSKASKDTSSKRQNKDGAWDSLQMMTKPKQNQLTLVTDSEMALVNAYLEQRRARHHSEFSRVNQTQPDSDTTECESEVSNSGASSWKESESEHHQSPASIKKRKIAQRQRNMRGCQIRERPCLHCKAMRTNEWLTRHFLQNASVTTPKKGDIQEGNSGSGINIKFSKF*