Sequence detailsbmy_08079 (Coding sequence)

Part of scaffold_340 (SequenceType object (1))

For more information consult the page for scaffold_340 (SequenceType object (1))

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

SMOENSBTAG00000013287 (Cow)

Gene Details

smoothened homolog precursor

External Links

Gene match(Ensembl Protein ID:ENSBTAP00000017670, Cow)

Protein Percentage 97.95%
cDNA percentage 95.09%
Ka/Ks Ratio 0.03084 (Ka = 0.0086, Ks = 0.2798)

Additional orthologs identified in other species via the OPTIC pipeline.

SMO (Human)  

Genome Location

Sequence SequenceType object (2)

Length: 2349 bp    Location:1123544..1103250   Strand:-
Raw sequence 
>bmy_08079
ATGGCCGCTGCCCGCCTCGCACGGGGGCCGGCGCTCCTGCTCCTGGGGCTGTTGCTGCTGCTGCTGCTGGGGGGCCCGGGCCGGGGGGCGGCCTTGAGCGGGAACGCGACCCGGCCTGGGCCGCGGAGCGCGGGCGGGAGCGCGAGAAGGAGCGCGGCCGTGACCGGCCCTCCGCCGCTGCTGAGCCACTGCGGCCGGGCCACCCCCTGCGAGCCGCTGCGCTACAACGTGTGCCTGGGCTCGGCGCTGCCCTACGGGGCCACCTCCACTCTGCTGGCCGGGGACTCGGACTCCCAGGAGGAAGCGCACGGCAAGCTGGTGCTCTGGTCGGGCCTCCGGAACGCCCCCCGCTGCTGGGCAGTGATTCAGCCCCTGCTGTGTGCTGTGTACATGCCAAAGTGTGAGAACAACCGGGTGGAACTGCCCAGCCGCACCCTCTGCCAGGCCACCCGTGGCCCCTGTGCCATCGTGGAGAGGGAGCGGGGCTGGCCCGACTTCCTGCGCTGCACCCCCGACCACTTCCCCGAGGGCTGCCCGAATGAGGTGCAGAACATCAAGTTCAACAGTTCGGGCCAATGTGAGGCTCCCTTGGTTCGGACTGACAACCCCAAGAGCTGGTATGAGGACGTGGAGGGCTGTGGGATCCAGTGCCAGAACCCGCTCTTCACCGAGGCCGAGCACCAGGACATGCACAGCTACATCGCGGCCTTCGGGGCCGTCACGGGCCTCTGCACGCTCTTCACCCTGGCCACATTTGTGGCTGACTGGCGGAATTCCAATCGTTACCCTGCTGTCATTCTCTTCTACGTCAACGCGTGTTTCTTCGTGGGCAGCATTGGCTGGCTGGCCCAGTTCATGGACGGTGCCCGCCGGGAGATCGTCTGCCGTGCTGATGGCACCATGAGGCTTGGGGAGCCCACCTCCAACGAGACCCTGTCCTGTGTCATCATCTTCGTCATCGTGTACTATGCCCTGATGGCCGGCGTCGTCTGGTTTGTGGTCCTCACCTATGCCTGGCACACCTCCTTCAAAGCCCTGGGGACCACCTACCAGCCTCTCTCGGGCAAGACCTCCTACTTCCACCTGCTCACCTGGTCGCTCCCCTTTGTCCTCACGGTGGCAATCCTCGCTGTGGCCCAGGTGGATGGGGACTCCGTGAGCGGCATCTGTTTTGTGGGCTATAAGAACTACCGATACCGTGCTGGCTTCGTGCTGGCCCCGATCGGCCTGGTGCTCATTGTGGGAGGTTACTTCCTCATCCGAGGAGTCATGACCCTGTTCTCCATCAAGAGCAACCACCCTGGGCTGCTGAGCGAGAAGGCAGCCAGCAAGATCAACGAGACCATGCTGCGCCTGGGCATTTTTGGCTTCCTGGCCTTTGGCTTTGTGCTCATCACCTTCAGCTGCCACTTCTACGACTTCTTCAACCAGGCTGAGTGGGAGCGCAGCTTCCGGGACTACGTGCTGTGCCAGGCCAATGTGACCATCGGGCTGCCCACCAAGAAACCCATCCCCGACTGTGAGATCAAGAATCGCCCTAGCCTCCTGGTGGAGAAGATCAACCTATTTGCCATGTTTGGAACCGGCATTGCCATGAGCACCTGGGTCTGGACCAAGGCCACGCTGCTCATCTGGAGGCGCACCTGGTGCAGGTTGACGGGGCAGAGTGACGATGAGCCCAAACGGATCAAGAAGAGCAAGATGATCGCCAAGGCCTTCTCCAAGCGGCGCGAGCTGCTGCAGAACCCAGGCCAGGAGCTCTCCTTCAGCATGCACACTGTCTCCCACGACGGGCCTGTGGCGGGTTTGGTCTTTGACCTCAATGAGCCCTCGGCCGATGTGTCCTCTGCTTGGGCCCAGCATGTCACCAAGATGGTGGCCCGGAGAGGAGCCATACTGCCCCAGGATGTGTCTGTCACCCCTGTGGCAACTCCAGTACCCCCGGAGGAAAAAGCCAACCTGTGGCTGGTTGAGGCAGAGATCTCCCCAGAGCTGGAGAAGCGCCTGGGCCGGAGGAAGAAGCGGAGGAAGAGGAAGAAGGAGGTGTGCCCGCTGGTGTCGCCCCCTGAGCTCCACCACCCTGCCCCGGGCCCTGCCCCTGCCTCCAGTGCTGTCCCTCGGCTGCCCCAGCTGCCCCGGCAGAAGTGCCTGGTGGCCGCGGGTGCCTGGGGAGCTGGGGACTCCTACCGACAGGGAGCCTGGACCCTGGTCTCCAACCCCTTCTGCCCAGAGCCCAGCGCCCCAGCCCCCCTGGCCTGGGCGCAGGGCCGACGGCAGGGGCTAGGGCCCATTCACTCCCGCACCAACCTGATGGAGGCAGAACTCATGGACGCAGACTCGGACTTCTGA

Related Sequences

bmy_08079T0 SequenceType object (3)

Length: 783 aa      View alignments
>bmy_08079T0
MAAARLARGPALLLLGLLLLLLLGGPGRGAALSGNATRPGPRSAGGSARRSAAVTGPPPLLSHCGRATPCEPLRYNVCLGSALPYGATSTLLAGDSDSQEEAHGKLVLWSGLRNAPRCWAVIQPLLCAVYMPKCENNRVELPSRTLCQATRGPCAIVERERGWPDFLRCTPDHFPEGCPNEVQNIKFNSSGQCEAPLVRTDNPKSWYEDVEGCGIQCQNPLFTEAEHQDMHSYIAAFGAVTGLCTLFTLATFVADWRNSNRYPAVILFYVNACFFVGSIGWLAQFMDGARREIVCRADGTMRLGEPTSNETLSCVIIFVIVYYALMAGVVWFVVLTYAWHTSFKALGTTYQPLSGKTSYFHLLTWSLPFVLTVAILAVAQVDGDSVSGICFVGYKNYRYRAGFVLAPIGLVLIVGGYFLIRGVMTLFSIKSNHPGLLSEKAASKINETMLRLGIFGFLAFGFVLITFSCHFYDFFNQAEWERSFRDYVLCQANVTIGLPTKKPIPDCEIKNRPSLLVEKINLFAMFGTGIAMSTWVWTKATLLIWRRTWCRLTGQSDDEPKRIKKSKMIAKAFSKRRELLQNPGQELSFSMHTVSHDGPVAGLVFDLNEPSADVSSAWAQHVTKMVARRGAILPQDVSVTPVATPVPPEEKANLWLVEAEISPELEKRLGRRKKRRKRKKEVCPLVSPPELHHPAPGPAPASSAVPRLPQLPRQKCLVAAGAWGAGDSYRQGAWTLVSNPFCPEPSAPAPLAWAQGRRQGLGPIHSRTNLMEAELMDADSDF*