Sequence details bmy_08081 (Coding sequence)

Part of scaffold_340 (Scaffold)

For more information consult the page for scaffold_340 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

TNPO3 ENSTTRG00000014618 (Bottlenosed dolphin)

Gene Details

transportin 3

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000013862, Bottlenosed dolphin)

Protein Percentage 85.7%
cDNA percentage 85.7%
Ka/Ks Ratio 0.27761 (Ka = 0.0127, Ks = 0.0456)

TNPO3 ENSBTAG00000004992 (Cow)

Gene Details

transportin-3

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000006573, Cow)

Protein Percentage 97.46%
cDNA percentage 95.27%
Ka/Ks Ratio 0.10547 (Ka = 0.0155, Ks = 0.1465)

TNPO3  (Minke Whale)

Gene Details

transportin 3

External Links

Gene match (Identifier: BACU006810, Minke Whale)

Protein Percentage 90.71%
cDNA percentage 92.68%
Ka/Ks Ratio 0.75346 (Ka = 0.0721, Ks = 0.0956)

Additional orthologs identified in other species via the OPTIC pipeline.

TNPO3 (Human)   Tnpo3 (Mouse)  

Genome Location

Sequence Coding sequence

Length: 2793 bp    Location:1216783..1295387   Strand:+
Raw sequence 
>bmy_08081
ATGGAAGGGGCAAAGCCGACATTGCAGCTCGTGTACCAGGCAGTGCAGGCGCTCTACCACGACCCAGATCCCAGCGGAAAGGAGCGTGCCTCGTTTTGGCTTGGGGAGCTGCAGCGTTCGGAAAATATTGAGCTTCTTCTCATTGCTAAAGCAAAATATATATTTAAAACAAAACAGAACCAAGGCTCCAACTGGGTTGTATGGCATAAACGTTGTTTAGAAAAGCAGTTTTTAAGACTTTTTTTTTGTCTGATCTACTTTCAGGTTCATGCATGGGAGATTTCAGACCAATTGTTACAGATCCGGCAAGATGTGGAATCATGCTATTTTGCTGCACAGACCATGAAAATGAAGATTCAGACCTCATTTTATGAGCTCCCCACAGACTCTCATGCCTCTTTACGGGACTCATTACTAACCCATATCCAGAACTTGAAAGACTTGTCACCTGTCATTGTAACTCAGCTGGCTTTAGCAATAGCAGACCTTGCTCTACAGATGCCTTCCTGGAAGGGATGTGTACAAACATTGGTAGAAAAATATAGCAATGATGTAACTTCTCTGCCTTTTCTGCTGGAGATCCTTACAGTGTTACCTGAAGAAGTACATAGTCGTTCCTTACGAATTGGAGCTAACCGGCGTACAGAAATTATAGAAGATTTGGCCTTCTATTCTAGTACAGTGGTATCTCTATTGATGACTTGTGTAGAAAAAGCAGGAACAGAAGAGAAAATGCTTATGAAGGTCTTTCGCTGTTTGGGAAGCTGGTTTAACTTAGGAGTTTTGGACAGTAACTTCATGGCTAACAATAAGTTACTAGCACTCCTTTTTGAGGTTTTGCTTAATGATCAAACTTCTTACTTCCCTACTCCTGCTACCTCCCAGCAACAGGATAAGACCTCATCCAACCTACATGAAGCTGCTTCAGACTGCGTGTGCTCAGCTCTGTACGCCATTGAGAATGTGGAAACCAACTTGCCATTAGCCATGCAACTTTTTCAAGGAGTCCTGACATTGGAGACTGCCTATCATATGGCTGTGGCACGTGAAGATTTAGACAAAGTTTTGAATTACTGCCGTATTTTCACTGAACTGTGTGAAACTTTTCTTGAAAAAATTGTTTGTACTCCAGGCCAAGGCCTTGGGGACCTACGAACTCTAGAACTGCTTCTTATCTGTGCAGGACACCCTCAATATGAGGTAGTAGAAATTTCCTTTAACTTYTGGTACCGACTAGGGGAGCATTTATACAAAACTAATGATGAAGTTATTCATGGCATCTTCAAAGCTTACATTCAAAGGCTGCTTCATGCCTTGGCTCGCCACTGCCAGCTGGAACCAGACCATGAAGGGGTTCCTGAGGAGACTGATGACTTTGGGGAGTTTCGGATGAGGGTGTCAGACCTGGTGAAGGACTTGATTTTCTTGATTGGGTCTATGGAGTGTTTTGCTCAGTTATATTCTACTCTGAAAGAAGGCAACCCACCCTGGGAGGTGACAGAAGCGGTTCTCTTTATCATGGCTGCTATAGCAAAGAGTGTTGATCCGGAGAACAATCCAACACTTGTGGAGGTCCTAGAAGGAGTTGTCCGTCTCCCAGAGACCGTACATACAGCTGTGCGATACACCAGCATTGAATTGGTTGGAGAGATGAGCGAAGTGGTTGATCGAAATCCTCAGTTCCTTGACCCTGTGTTGGGCTATTTGATGAAAGGACTGTGTGAAAAACCTCTGGCTTCTGCTGCAGCCAAAGCCATTCATAACATTTGCTCTGTCTGCCGAGACCACATGGCTCAGCACTTTCATGGACTCCTAGAGATTGCCCGTTCCCTTGATTCCTTCATGTTGTCTCCAGAAGCTGCTGTGGGCTTGCTAAAAGAGTGGGAGAAAAAGGTATTGAGTCTTAAAAATACTCTGGTTTTCTTTAATTGGCACACCAATCCCATTGTGGAAAATGGACAGACTCATCCGTGCCAAAAAGTCATACAGGAAATATGGCCAGTTTTATCTGAGACTCTAAATAAGCACCGGGCTGATAATCGGATTGTAGAACGTTGTTGCAGGTGCCTCCGTTTTGCTGTTCGCTGTGTAGGCAAAGGATCTGCAGCCCTGCTGCAGCCACTAGTCACACAGATGGTGAATGTTTACCATGTACATCAGCATTCCTGTTTCCTGTACCTTGGTAGTATCCTTGTGGATGAGTATGGCATGGAAGAGGGCTGTCGGCAGGGACTACTAGACATGCTCCAGGCACTGTGCATGCCCACCTTTCAGCTCTTAGAACAGCAGAATGGGCTCCAGAATCACCCTGACACTGTGGACGACCTATTCAGGCTAGCCACCAGGTTTATTCAGCGTAGCCCTGTTACCTTGCTGAGGAGCCAGGTTGTCATCCCTATCTTACAATGGGCCATTGCCTCTACTACCCTGGACCACCGGGATGCCAACTGTAGTGTCATGAGGTTCCTACGAGACCTCATCCACACAGGGGTAGCCAATGATCATGAAGAAGACTTTGAATTACGGAAAGAACTGATTGGACAGGTGATGAACCAGCTTGGACAGCAACTTGTAAGCCAGCTGCTTCACACGTGCTGCTTCTGTCTCCCCCCATACACCCTACCAGATGTGGCCGAAGTGCTCTGGGAGATCATGCAAGTTGACAGACCGACTTTTTGTCGATGGTTAGAGAATTCCTTGAAAGGTTTGCCAAAGGAGACAACCGTGGGAGCTGTCACAGTGACACACAAACAACTTACAGATTTCCACAAACAAGTCACTAGATACTTCTAG

Related Sequences

bmy_08081T0 Protein

Length: 931 aa      View alignments
>bmy_08081T0
MEGAKPTLQLVYQAVQALYHDPDPSGKERASFWLGELQRSENIELLLIAKAKYIFKTKQNQGSNWVVWHKRCLEKQFLRLFFCLIYFQVHAWEISDQLLQIRQDVESCYFAAQTMKMKIQTSFYELPTDSHASLRDSLLTHIQNLKDLSPVIVTQLALAIADLALQMPSWKGCVQTLVEKYSNDVTSLPFLLEILTVLPEEVHSRSLRIGANRRTEIIEDLAFYSSTVVSLLMTCVEKAGTEEKMLMKVFRCLGSWFNLGVLDSNFMANNKLLALLFEVLLNDQTSYFPTPATSQQQDKTSSNLHEAASDCVCSALYAIENVETNLPLAMQLFQGVLTLETAYHMAVAREDLDKVLNYCRIFTELCETFLEKIVCTPGQGLGDLRTLELLLICAGHPQYEVVEISFNFWYRLGEHLYKTNDEVIHGIFKAYIQRLLHALARHCQLEPDHEGVPEETDDFGEFRMRVSDLVKDLIFLIGSMECFAQLYSTLKEGNPPWEVTEAVLFIMAAIAKSVDPENNPTLVEVLEGVVRLPETVHTAVRYTSIELVGEMSEVVDRNPQFLDPVLGYLMKGLCEKPLASAAAKAIHNICSVCRDHMAQHFHGLLEIARSLDSFMLSPEAAVGLLKEWEKKVLSLKNTLVFFNWHTNPIVENGQTHPCQKVIQEIWPVLSETLNKHRADNRIVERCCRCLRFAVRCVGKGSAALLQPLVTQMVNVYHVHQHSCFLYLGSILVDEYGMEEGCRQGLLDMLQALCMPTFQLLEQQNGLQNHPDTVDDLFRLATRFIQRSPVTLLRSQVVIPILQWAIASTTLDHRDANCSVMRFLRDLIHTGVANDHEEDFELRKELIGQVMNQLGQQLVSQLLHTCCFCLPPYTLPDVAEVLWEIMQVDRPTFCRWLENSLKGLPKETTVGAVTVTHKQLTDFHKQVTRYF*