Sequence details bmy_08100 (Coding sequence)

Part of scaffold_343 (Scaffold)

For more information consult the page for scaffold_343 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

WDHD1 ENSTTRG00000003314 (Bottlenosed dolphin)

Gene Details

WD repeat and HMG-box DNA binding protein 1

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000003111, Bottlenosed dolphin)

Protein Percentage 94.77%
cDNA percentage 95.88%
Ka/Ks Ratio 0.38489 (Ka = 0.0322, Ks = 0.0837)

WDHD1 ENSBTAG00000019120 (Cow)

Gene Details

WD repeat and HMG-box DNA-binding protein 1

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000025453, Cow)

Protein Percentage 89.33%
cDNA percentage 92.58%
Ka/Ks Ratio 0.37239 (Ka = 0.0588, Ks = 0.1579)

Additional orthologs identified in other species via the OPTIC pipeline.

WDHD1 (Human)   Wdhd1 (Mouse)  

Genome Location

Sequence Coding sequence

Length: 3276 bp    Location:1145564..1208766   Strand:+
Raw sequence 
>bmy_08100
ATGCCTGCTACACAGAAGCCGATGAGATATGGGCACACAGAGGGACACACAGATGTCTGTTTTGATGATTCTGGGAGTTGTATTGTAACTTGTGGAAGTGATGGTGATGTGAGGATTTGGGAAGACTTGGATGATGATGATCCTAAGTCCATTAATGTTGGAGAAAAAGCATATTCATGTGCTTTAAAGAATGGGAAATTGGTCACTGCAGTATCTAACAATACTGTTCAAGTGCACACGTTTCCTGAAGGAGTTCCAGATGGTATATTGACTCGCTTCACCACAAATGCAAACCATGTGATCTTTAATGGGGATGGTGCAAAAATTGCTGCTGGATCTAGTGATTTTCTAGTCAAAGTTGTGGATGTGGTGGATTGCAGCCAACAGAAAACATTTCGAGGACACGATGCACCTGTTTTAAGTCTTTCCTTTGACCCTAAGGACATCTTTGTGGCATCAGCTAGTTGTGATGGATCTGTCAAGGTGTGGCAAATTTCAGATCAGACATGTGCTATTAGTTGGCCACTGCTGCAAAAATGCAATGATGTGATAAATGCAAAATCAATCTGCAGACTTGCTTGGCAGCCAAAAAGTGGGAAGTTACTAGCAGTTCCTGTGGAAAAATCTGTTAAGCTATATAGAAGAGAAACTTGGAGTAATCAATTTGATCTTTCAGATAATTTCATCTCTCAGACCCTAAATATAGTAACCTGGTCTCCTTGTGGACAATATTTAGCTGCAGGGAGTATTAATGGTTTAATTATAGTTTGGAATGTGGAAACCAAAGATTGCATGGAAAGGGTGAAACATGAGAAAGGTTACGCAATTTGTGGCCTGTCATGGCATCCTACTTGTGGTCAAATAGCTTATACTGATGCAGAAGGAAATCTAGGAGTCCTGGAGAATGTATCTAGCAGAGTAGAAAAGGATTATAACGATCTTTTTGATGGAGAAGATACAAATAGTGCCGGTGATTTTCTAAATGACAATGCAGTTGAAACCCGCTCTTTTTCAAAAGGGATTATAAATGATGGRGAAGATGATGATGACCTCATGCTGGCTTCAGGTCGTCCTAGACAGCGAAGTCATATCCTAGAAGATGATGAAAACTCAGTTGATGTTACAATGATAAAAACTGGTTCTAGTTTTCTCAAAGAAGAGGAGGAAGATGATCAGGCAGGCAGCATTCACAATCTACCAGTTGTAACATCCCAAAGGCCATTTTATGATGGTCCTATGCCAACGCCCCGGCAAAGGCCATTCCAGTCAGGTTCTACACCCTTGCATCTCACTCACAGATTCATGGTGTGGAACTCTATTGGAATTATTCGCTGCTATAATGATGAGCAAGACAATGCCATAGATGTGGAGTTCCATGATACCTCCATACACCATGCAACACACTTATCAAACACTTTGAATTATACAGTAGCAGATCTTTCCCATGAAGCTGTTTTGTTGGCATGTGAAAGCACTGATGAACTAGCAAGCAAGCTTCACTGCCTGCACTTTAGTTCATGGGATTCAAGCAAAGAGTGGATAGTAGACATGCCTCAGAATGAAAACATTGAAGCCATATGTCTTGGTCAGGGATGGGCTGCTGCTGCCACTAGCGCCTTGCTCCTTCGCTTGTTTACCATTGGAGGTGTTCAAAAAGAGGTCTTCAGTCTCCCTGGGCCTGTTGTATCAGTGGCAGGACATGGAGAACAGCTTGTCATTGTTTATCACAGAGGTACAGGATTTGATGGGGATCAGTGCCTTGGAGTTCAGCTGCTAGAGCTGGGGAAAAAGAAAAAACAAATTTTACATGGGGATCCTCTTCCTCTTACAAGGAAATCCTACCTTGTACCCCATTTTATGTGGATTCAGAAGGCATTGTTCGAATGCTTAACAGAGGACTTGGTCATACATGGACTCCTGTATGTAACACAAGAGAACACTGCAAAGGAAAATCTGATCACTACTGGGTGTATTCCTTGCAAAGGTTCTCGATTTCCTCCCACCCTTCCACGCCCTGCTGTAGCTGTATTATCCTTTAAGCTTCCTTACTGTCAGACTGCCACAGAGAAAGGACAAATGGAGGAACAGTACTGGCGTTCAGTTACGTTTCACAACCACCTTGATTATTTAGCTAAAAATGGTTATGAATATGAAGAGAGCACTAAAAATCAAGCAATAAAAGAACAACAGGAACTTTTAATGAAAATGCTTGCGCTTTCTTGTAAACTGGAGCGGGAATTTCGTTGTGTGGAACTTGCTGATCTAATGACTCAAAATGCTGTGAATTTAGCCATTAAATATGCTTCTCGTTCTCGGAGATTAATATTGGCCCAGAGACTTAGTGAACTGGCTGTAGAGAAAGCAGCAGAATCGGCAGCCACCCATGCTGAAGAAGAGGAAGAAGAAGAAGAGGATTTCAGAAAAAAGTTGAATGCTGGTTACAGTAATACTCCTACAGAGTGGAGTCAGCCAAGGCTCAGAAATCAAGTTGAAGAAGATTCAGAGGATACTGGAGAAGCTGATGATATAGAAGAAAAACCAGAAATACACAAACATGGAGAAAACCCATTTTTCAAAAGTGTAAATTCCTCTGATATGCCAGCTATTAAGTCAGGTGCAGTTACCTCTAGCAACCAAGGACGAATAAACCCCTTCAAGGTATCAGGCAATTCCAAAGAGCCATCCATTTCAGTGAATTCAGTACGTTCAACTAATATTTTAGACAATATGAACAAATCATCCAAGAAATCTACTGCACTTCATCGAGCTACAAATTATGAAAAGTCTCCAGTTATAAAGCCTCTGGTTCCAAAACCAAAGTCTAAGCAGGCATCTGCAGCATCCTTTTTCCGGAAAAGAACTTCCCAAGCTGATAGGACTGAGGAAGTAAAAGAAGAAAATCCTAAAAATCCATCATCTGAAACCCCAGCTATGTGTCCTCAAAACACTGAAAACCAAAGGCCAAAGACCGGGTTCCAGATGTGGCTGGAAGAAAACAGATGTAATATTTTGTCTGACAATCCTGACTTTTCAGATGAAGCAGACATAATAAAAGAAGGAATGGTTCGATTTAGAGCATGGGCTGCCAAGGCCAAAGGAGGAACTGCAAGTGATGGAGCTGAAGAAAAGAAACGAAAACGTGTGGTCGATGATAGTCACGAAACTGAAAACCAGAAAGAAAGAACGAAGGAGAATCTGAATTTGCCTAAAAAGCAAAAACCTTTAGATCTTTCTACGAATCAGAAACTGTCAGCTTTTGCATTTAATCAGGAATAG

Related Sequences

bmy_08100T0 Protein

Length: 1092 aa      View alignments
>bmy_08100T0
MPATQKPMRYGHTEGHTDVCFDDSGSCIVTCGSDGDVRIWEDLDDDDPKSINVGEKAYSCALKNGKLVTAVSNNTVQVHTFPEGVPDGILTRFTTNANHVIFNGDGAKIAAGSSDFLVKVVDVVDCSQQKTFRGHDAPVLSLSFDPKDIFVASASCDGSVKVWQISDQTCAISWPLLQKCNDVINAKSICRLAWQPKSGKLLAVPVEKSVKLYRRETWSNQFDLSDNFISQTLNIVTWSPCGQYLAAGSINGLIIVWNVETKDCMERVKHEKGYAICGLSWHPTCGQIAYTDAEGNLGVLENVSSRVEKDYNDLFDGEDTNSAGDFLNDNAVETRSFSKGIINDGEDDDDLMLASGRPRQRSHILEDDENSVDVTMIKTGSSFLKEEEEDDQAGSIHNLPVVTSQRPFYDGPMPTPRQRPFQSGSTPLHLTHRFMVWNSIGIIRCYNDEQDNAIDVEFHDTSIHHATHLSNTLNYTVADLSHEAVLLACESTDELASKLHCLHFSSWDSSKEWIVDMPQNENIEAICLGQGWAAAATSALLLRLFTIGGVQKEVFSLPGPVVSVAGHGEQLVIVYHRGTGFDGDQCLGVQLLELGKKKKQILHGDPLPLTRKSYLVPHFMWIQKALFECLTEDLVIHGLLYVTQENTAKENLITTGCIPCKGSRFPPTLPRPAVAVLSFKLPYCQTATEKGQMEEQYWRSVTFHNHLDYLAKNGYEYEESTKNQAIKEQQELLMKMLALSCKLEREFRCVELADLMTQNAVNLAIKYASRSRRLILAQRLSELAVEKAAESAATHAEEEEEEEEDFRKKLNAGYSNTPTEWSQPRLRNQVEEDSEDTGEADDIEEKPEIHKHGENPFFKSVNSSDMPAIKSGAVTSSNQGRINPFKVSGNSKEPSISVNSVRSTNILDNMNKSSKKSTALHRATNYEKSPVIKPLVPKPKSKQASAASFFRKRTSQADRTEEVKEENPKNPSSETPAMCPQNTENQRPKTGFQMWLEENRCNILSDNPDFSDEADIIKEGMVRFRAWAAKAKGGTASDGAEEKKRKRVVDDSHETENQKERTKENLNLPKKQKPLDLSTNQKLSAFAFNQE*