Part of scaffold_356 (Scaffold)

For more information consult the page for scaffold_356 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

VSTM2A ENSTTRG00000012046 (Bottlenosed dolphin)

Gene Details

V-set and transmembrane domain containing 2A

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000011429, Bottlenosed dolphin)

Protein Percentage 72.94%
cDNA percentage 75.54%
Ka/Ks Ratio 0.70171 (Ka = 0.0515, Ks = 0.0734)

BT.66099 ENSBTAG00000003625 (Cow)

Gene Details

V-set and transmembrane domain-containing protein 2A precursor

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000004727, Cow)

Protein Percentage 90.87%
cDNA percentage 92.39%
Ka/Ks Ratio 0.254 (Ka = 0.0492, Ks = 0.1937)

VSTM2A  (Minke Whale)

Gene Details

V-set and transmembrane domain containing 2A

External Links

Gene match (Identifier: BACU012568, Minke Whale)

Protein Percentage 94.52%
cDNA percentage 96.35%
Ka/Ks Ratio 0.43786 (Ka = 0.0294, Ks = 0.0671)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 660 bp    Location:699342..706564   Strand:+
>bmy_08124
ATGGGGATCTTTTTGGCGTATGTTGGATTTGTTTTCTTTTCCGTTTTATATGTACAGCAAGGGCTTTCTTCTCAAGCAAAATTTACCGAGTTTCCGCGGAACGTGACTGCGACCGAGGGGCAGAATGTGGAGATGTCCTGCGCTTTCCAGAGCGGCTCCGCCTCGGTGTACCTGGAGATCCAGTGGTGGTTCCTGCGGGGGCCGGAGGACCTGGACCCCGGGGCCGAAGTGGCCGGGGCACAGGCGGAGCTGCTGCCATACCGGGACCCGGACGGCGACGGGACCAAGATCAGCACAGTGAAAGTCCAAGGCAATGACATCTCTCACAAGCTTCAGATTTCCAAAGTGAGGAAAAAGGATGAAGGCGTATATGAATGCAGGGTGACCGACGCCAATTACGGAGAGCTTCAGGAACACAAAGCCCAGGCCTACCTAAAAGTCAACGCCAACAGCCATGCTCGGAGGATGCAGGCCTTCGAGGCCTCGCCCATGTGGCTGCAGGATGCGAAGCCTCGCAGGAACGTCTCGGCGGCCGCTCCCGGCAGCATGCACGGCTCTGCCAACCAGCAAGTGCTCTCCACTTCCAGCCCTCAAGCGGTAGCCAAAATCCCCAAACAAAGTCCACAATCAGATTTATGTATCGATAATGGCCCAAATTAA

Related Sequences

bmy_08124T0 Protein

Length: 220 aa      View alignments
>bmy_08124T0
MGIFLAYVGFVFFSVLYVQQGLSSQAKFTEFPRNVTATEGQNVEMSCAFQSGSASVYLEIQWWFLRGPEDLDPGAEVAGAQAELLPYRDPDGDGTKISTVKVQGNDISHKLQISKVRKKDEGVYECRVTDANYGELQEHKAQAYLKVNANSHARRMQAFEASPMWLQDAKPRRNVSAAAPGSMHGSANQQVLSTSSPQAVAKIPKQSPQSDLCIDNGPN*