Part of scaffold_359 (Scaffold)

For more information consult the page for scaffold_359 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

HMGCS1 ENSTTRG00000009689 (Bottlenosed dolphin)

Gene Details

3-hydroxy-3-methylglutaryl-CoA synthase 1 (soluble)

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000009174, Bottlenosed dolphin)

Protein Percentage 88.14%
cDNA percentage 87.8%
Ka/Ks Ratio 0.08277 (Ka = 0.0022, Ks = 0.0271)

HMGCS1 ENSBTAG00000011839 (Cow)

Gene Details

hydroxymethylglutaryl-CoA synthase, cytoplasmic

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000015713, Cow)

Protein Percentage 91.86%
cDNA percentage 90.56%
Ka/Ks Ratio 0.24397 (Ka = 0.0599, Ks = 0.2455)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 1830 bp    Location:457182..476956   Strand:+
>bmy_08135
ACGAGGGAAAACCCCAGCGAGTGCCCGCCTCCAGTTTCCTTCGGATTGGTTGAAACCGGACTGGGAGGCGGGCGCTACAGGCCTACTCTGCCGGCCACGATTGGCTGCTGGGGCCACGGTCCCGCCTCCCACCGACTCCGGGCCGTGCCGGAGTCTGGTGGGTCCGCGGCTATAAAGCTGGTGGCGGAGGGGAGGCGCCGTGGACTGCATCTTCGTTGGTCGTTGCTCTTCCACGGCCACCGCCCGCTCACATTTCGTTCTTTCACCATGCCTGGGTCACTTCCTTTGAACGCAGAAGCCTGCTGGCCAAAAGATGTGGGGATTGTTGCCCTTGAGATCTATTTTCCTTCTCAATATGTTGATCAAGCAGAGTTGGAAAAATATGATGGTGTAGATGCTGGAAAGTATACTATTGGCCTGGGCCAGGCCAAGATGGGCTTCTGCACAGATAGAGAAGATATCAACTCTCTTTGCATGACTGTGGTCCAGAATCTTATGGAGAGAAATAGCCTTTCTTATGATTGCATTGGGCGGCTAGAAGTTGGAACAGAGACAATCATCGACAAATCAAAGTCAGTGAAGACGAATTTGATGCAGCTCTTTGAAGAGTCYGGGAATACAGATATAGAAGGAATAGAYACAACTAATGCGTGCTATGGAGGCACAGCTGCTGTCTTCAATGCTGTTAACTGGATTGAGTCCAGCTCTTGGGATGGACGGTATGCCATGGTAGTTGCAGGGGATATTGCTGTATATGCCACAGGAAATGCTAGACCTACAGGTGGAGTTGGAGCCGTTGCTATGCTAATTGGGCCTAATGCTCCTTTAATTTTTGAACGAGGACTTCGTGGGACACATATGCAACATGCCTATGACTTTTACAAGCCTGATATGCTTTCTGAATACCCTATAGTAGATGGAAAACTATCCATTCAGTGCTACCTCAGTGCGTTAGACCGCTGCTATTCTGTCTACCGCAAGAAGATCTATGCCCAGTGGCAGAAAGAGGGAAATGATAGAGATTTCACCTTGAATGATTTTGGTTTCATGATCTTCCACTCACCCTATTGTAAACTGGTTCAGAAATCTGTAGCTCGGATGTTGCTGAATGACTTCCTTAATGACCAGAACAGAGATAAAAATAGTATCTATAGTGGCCTGGAAGCCTTTGGGGATGTTAAGTTAGAAGATACCTACTTCGATAGAGATGTGGAAAAGGCATTTATGAAGGCTAGTTCAGAACTCTTCAATCAGAAAACAAAGGCATCTTTGCTTGTGTCAAATCAAAATGGAAATATGTACACATCTTCAGTGTATGGCTCCCTCGCTTCTGTTCTTGCACAGTACTCACCTCAGCAGCTGGCAGGAAAGAGGATTGGTGTGTTCTCTTACGGTTCTGGTTTAGCTGCCACTCTGTACTCCCTCAAAGTTACACAAGATGCCACACCAGGGTCTGCTCTTGATAAAATAATAGCAAGCTTATGTGATCTTAAATCAAGGCTTGACTCAAGAACTTGTGTGGCACCAGATGTCTTTGCTGAAAACATGAAGCTCCGAGAGGACACTCATCACTTGGTCAGCTATATTCCCCAGAGTTCAATAGACTCACTCTTTGAAGGAACATGGTACCTAGTTCGAGTAGATGAGAAGCACAGAAGAACTTATGCTCGGCGCCCCTCTCCAAATGATGACACTTTGGATGAAGGCGTAGGGCTTGTGCATTCAAGCACAGCAACTGAGCATATTCCAAGCCCTGCTAAGAAAGTGCCAAGACTCCCTGCAACAGCAGCAGAACCTGAAGCAGCCGTCATCAGTAACGGGGAGCATTAA

Related Sequences

bmy_08135T0 Protein

Length: 610 aa      View alignments
>bmy_08135T0
TRENPSECPPPVSFGLVETGLGGGRYRPTLPATIGCWGHGPASHRLRAVPESGGSAAIKLVAEGRRRGLHLRWSLLFHGHRPLTFRSFTMPGSLPLNAEACWPKDVGIVALEIYFPSQYVDQAELEKYDGVDAGKYTIGLGQAKMGFCTDREDINSLCMTVVQNLMERNSLSYDCIGRLEVGTETIIDKSKSVKTNLMQLFEESGNTDIEGIDTTNACYGGTAAVFNAVNWIESSSWDGRYAMVVAGDIAVYATGNARPTGGVGAVAMLIGPNAPLIFERGLRGTHMQHAYDFYKPDMLSEYPIVDGKLSIQCYLSALDRCYSVYRKKIYAQWQKEGNDRDFTLNDFGFMIFHSPYCKLVQKSVARMLLNDFLNDQNRDKNSIYSGLEAFGDVKLEDTYFDRDVEKAFMKASSELFNQKTKASLLVSNQNGNMYTSSVYGSLASVLAQYSPQQLAGKRIGVFSYGSGLAATLYSLKVTQDATPGSALDKIIASLCDLKSRLDSRTCVAPDVFAENMKLREDTHHLVSYIPQSSIDSLFEGTWYLVRVDEKHRRTYARRPSPNDDTLDEGVGLVHSSTATEHIPSPAKKVPRLPATAAEPEAAVISNGEH*