Part of scaffold_362 (Scaffold)

For more information consult the page for scaffold_362 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

RRP15 ENSTTRG00000013578 (Bottlenosed dolphin)

Gene Details

ribosomal RNA processing 15 homolog (S. cerevisiae)

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000012885, Bottlenosed dolphin)

Protein Percentage 81.36%
cDNA percentage 84.04%
Ka/Ks Ratio 0.43365 (Ka = 0.148, Ks = 0.3414)

RRP15 ENSBTAG00000009838 (Cow)

Gene Details

RRP15-like protein

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000012966, Cow)

Protein Percentage 73.31%
cDNA percentage 78.81%
Ka/Ks Ratio 0.30559 (Ka = 0.184, Ks = 0.6022)

RRP15  (Minke Whale)

Gene Details

ribosomal RNA processing 15 homolog (S. cerevisiae)

External Links

Gene match (Identifier: BACU004891, Minke Whale)

Protein Percentage 82.7%
cDNA percentage 86.78%
Ka/Ks Ratio 0.56123 (Ka = 0.1287, Ks = 0.2294)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 714 bp    Location:54712..67872   Strand:+
>bmy_08163
ATGGAGGGTCCTGCCATTCTCCGCTATTACTGCAGCTGTGGGACTCGGAAAAGTCTCCTCTTGCAAGAATGGAGACTGATGGAGAACCGTTCTGTAGGAAGCTGTGGATCGGAAAAGGATCACTTTTCCTCTGGTGAAGAAGCAATAGAAGCTGACAATGAGGATGAAGCTGAGCCCTGTGGCGATGGCAGTGAAGATGCTGTAGAAGCTAGTGTTGGAACTAACGTGGGCTGGGCAGATGCCATGGCTAAAATCCTTAACAAGAAGACTCCTAAAAGTAAACCCACCATTCTGGTCAAAAACAAAGAGCTGGAAAAGGAAAAAGAGAAGTTGAAGCAAGAGAGACTAGAGAAAAGAAAACAGCTTGATAAGAAGCGGGAATGGGAAATGATGTGCAGAGTAAAGCCAGATGTTGTCAAAGACAAAGAAACAGAGAGAAATCTTCAGAGAATTGCAACGAGGGGTGTGGTGCAATTATTTAATGCTGTTCAAAAGCATCAAAAGAACGTTGATGAAAAGGTTAARGAAGCTGGAGGATCTATTAGAAAGCGTGCTAAGCTGATATCAACTGTTTCCAAGAAAGATTTCATCAGTGTTCTCAGAGGGATGGATGGAAGTACAAATGAGAAAAGTTTGACTGGAAAGAAGTCGAAAGCCAAACAGGCTTTCTTTCCTCATATTGTAAAGCTTATATGCAGAAGGGTTGGAATATAG

Related Sequences

bmy_08163T0 Protein

Length: 238 aa     
>bmy_08163T0
MEGPAILRYYCSCGTRKSLLLQEWRLMENRSVGSCGSEKDHFSSGEEAIEADNEDEAEPCGDGSEDAVEASVGTNVGWADAMAKILNKKTPKSKPTILVKNKELEKEKEKLKQERLEKRKQLDKKREWEMMCRVKPDVVKDKETERNLQRIATRGVVQLFNAVQKHQKNVDEKVKEAGGSIRKRAKLISTVSKKDFISVLRGMDGSTNEKSLTGKKSKAKQAFFPHIVKLICRRVGI*