Part of scaffold_352 (Scaffold)

For more information consult the page for scaffold_352 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

PDZD8 ENSTTRG00000005284 (Bottlenosed dolphin)

Gene Details

PDZ domain containing 8

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000004981, Bottlenosed dolphin)

Protein Percentage 50.86%
cDNA percentage 51.52%
Ka/Ks Ratio 0.60484 (Ka = 0.0505, Ks = 0.0834)

PDZD8 ENSBTAG00000011401 (Cow)

Gene Details

PDZ domain-containing protein 8

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000015152, Cow)

Protein Percentage 92.6%
cDNA percentage 91.41%
Ka/Ks Ratio 0.17872 (Ka = 0.0439, Ks = 0.2457)

PDZD8  (Minke Whale)

Gene Details

PDZ domain containing 8

External Links

Gene match (Identifier: BACU004689, Minke Whale)

Protein Percentage 98.25%
cDNA percentage 98.29%
Ka/Ks Ratio 0.36049 (Ka = 0.0108, Ks = 0.03)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 2442 bp    Location:412404..421846   Strand:+
>bmy_08171
ATGTGTTGTGTTTTCTCACTCCACTACTGTGAACCCATTGAATCTGTTTTCATTTTTTTATCTTTATCAAAGGTTGAATTAATAAAGGGGAATTTACAAAGTGTCGGACTTACACTTCGTCTTGTCCAGTCAACTGACGGGTATGCTGGGCACGTCATAATTGAGACCGTGGCCCCAAACTCGCCTGCTGCAATTGCTGATCTTCAGCGGGGAGATCGACTGATTGCTATTGGAGGTGTGAAAATCACATCTACACTGCAAGTGTTGAAGCTTATCAAGCAGGCTGGTGACCGAGTCCTAGTATATTATGAAAGGCCTGTTGGCCAGAGTAACCAGGGTGCAGTGCTGCAAGATAACTTTGGACAGTTGGAAGACAACTTTCTGTCAGGCTCATGCCAACCAAACTATGAAGAGGAGACAAGTGGGTTGGCAGTAGATGCTGAAAACAGAGACCTGGATTCTGAATTTGAAGACTTAGCAAGTGATGTGAGAGCACAGACTGAGGTCAAAGATGAGGCACAGTCATTAAGTCACAGTCCCAGACGTACTCCAACAACACTTTCTGTTAAACCCCTTGGAACTATATCACCAGTTTTAAACCGTAAATTAGTTGTAGGAAGTTACCCACCACCCCCAAAACTTCCATCCAAAGAAGGAAATAAGCCCTTGGCCCTAAAATCTTCTGAGATAACAGAACCAGCACAAGTGTCAAAGCCCACCCAAGGATCCACTTTCAAACCACCTGTGCCACCACGACCGCAAGTCAAAGTTCCTTTGCCTTCTGCTGATGCCCCAAATCAGGCAGAACCAGATATTCTCGTTGAAAAGCCAGAGAAGGTGCTGCCACCGCCTGCTGCAGATAAACCTGCTGAAAAGCAAGCGAAAAATCTGGATCACGTAGAAGAAGCAGCTGCAGCTAAGCAGTTTTTAGCAAAGCAAGAAGTGGCAAAAGATTTGACTTCAGAAAGTTCCTGCCCTCCTAAGGACAGTTCAGATGACCATCAAACSTGGGAATCGTCAGAAATTCTCTATCGTAACAAGCTAGGAAAATGGACAAGAACCAGAGCCAGCTGCCTCTTTGACGTAGACGCCTGCCACAGGTACCTAAAYGTCGCGCTGTGGTGCAGGGAGCCTTTCAAATTAGGGGGTCTCATCTGTTTGGGGCACGTCAGCCTAAAACTTGAAGAGGTGGCTTTAGGATGCTTAGCTACATCGAACATGGAATACCTTTCCAAATTCAGACTGGAAGCCCCATCACCTAAGGCCATGGTCACGAGAACCGCGCTACGTAATCTGAGTATGCAGAAGGGGTTCAATGACAAATTTTGTTTCGGTGACATTACTGTTCACTTCAAATATCTGAAAGAAGGAGAGCCAGACCACCACGTAGTTACTAACTTAGAGAAAGAAAAAGAACTCCATTTGGTCGAAGAGGTTTCTGCCCTACCTAAAGAGGAGCACTTTGTTGGACAGATGGGTTTAACAGAAAATAAACATAGTTTCCAGGATACTCAGTTCCAGAACCCAACTTGGTGTGATTACTGTAAGAAAAAAGTTTGGACTAAAGCTGCTTCCCAGTGTATGTTCTGTGCTTATGTTTGCCATAAAAAATGTCAGGAAAAGTGTCTAGCCGAGACTCCTCTTTGTGGAGCAACTGATCAGCGGATAGACCGGGCCCTGAAAAATCTCAGGCTGGAAGGACAAGAAGCCCTCTTAGGCCTGCCCCCTCGTGTTGATGCTGAAGCTGGGAAGTCAGTCAACAGAACAACAGGTTTGACAAGACATATTATCAATACGAGCTCTCGTTTGTTAAATCTGCGTCAAGTCTCTAAAACTCGCCTTTCTGAGCCAGGAACTGATCTAGTAGAACCTTCACCAAAACACACACCCAACACATCAGACAACGAAGGCAGTGACACAGAGATCTGTGGCCCAAACAGCCCTTCTAAACGGGGCAACAACACAGGAATAAAATTAGTGAGAAAGGAGGGTGGTCTGGATGACAGCGTTTTCATTGCAGTCAAAGAAATCGGTCGTGATCTGTACAGGGGGTTGCCTACAGAGGAGAGGATCCAGAAACTAGAGTTCATGCTRGATAAACTGCAGAATGAAATTGATCAGGAGTTGGAACATAATAATACCCTTGTTAGAGAAGAAAAAGAGACAACAGATACGAGGAAAAAATCACTTCTTTCTGCTGCTTTGGCTAAATCAGGTGAAAGACTGCAAGCTCTAACACTTCTTATGATCCACTACAGAGCAGGCATTGAAGATATTGAATCTTTAGAAAGTCTGTCCTTAGACCAGCACTCCAAAAAAATAAGCAAGTACACAGATGATACGGAAGAAGACCTTGATGATAGTGAAATAACCCAACTAATAGACTCTCAGCCATTCAGTAGCATATCAGATGACTTATTTGGCCCATCTGAGTCTGTGTAA

Related Sequences

bmy_08171T0 Protein

Length: 814 aa      View alignments
>bmy_08171T0
MCCVFSLHYCEPIESVFIFLSLSKVELIKGNLQSVGLTLRLVQSTDGYAGHVIIETVAPNSPAAIADLQRGDRLIAIGGVKITSTLQVLKLIKQAGDRVLVYYERPVGQSNQGAVLQDNFGQLEDNFLSGSCQPNYEEETSGLAVDAENRDLDSEFEDLASDVRAQTEVKDEAQSLSHSPRRTPTTLSVKPLGTISPVLNRKLVVGSYPPPPKLPSKEGNKPLALKSSEITEPAQVSKPTQGSTFKPPVPPRPQVKVPLPSADAPNQAEPDILVEKPEKVLPPPAADKPAEKQAKNLDHVEEAAAAKQFLAKQEVAKDLTSESSCPPKDSSDDHQTWESSEILYRNKLGKWTRTRASCLFDVDACHRYLNVALWCREPFKLGGLICLGHVSLKLEEVALGCLATSNMEYLSKFRLEAPSPKAMVTRTALRNLSMQKGFNDKFCFGDITVHFKYLKEGEPDHHVVTNLEKEKELHLVEEVSALPKEEHFVGQMGLTENKHSFQDTQFQNPTWCDYCKKKVWTKAASQCMFCAYVCHKKCQEKCLAETPLCGATDQRIDRALKNLRLEGQEALLGLPPRVDAEAGKSVNRTTGLTRHIINTSSRLLNLRQVSKTRLSEPGTDLVEPSPKHTPNTSDNEGSDTEICGPNSPSKRGNNTGIKLVRKEGGLDDSVFIAVKEIGRDLYRGLPTEERIQKLEFMLDKLQNEIDQELEHNNTLVREEKETTDTRKKSLLSAALAKSGERLQALTLLMIHYRAGIEDIESLESLSLDQHSKKISKYTDDTEEDLDDSEITQLIDSQPFSSISDDLFGPSESV*