Part of scaffold_352 (Scaffold)

For more information consult the page for scaffold_352 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

SLC18A2 ENSTTRG00000005278 (Bottlenosed dolphin)

Gene Details

solute carrier family 18 (vesicular monoamine), member 2

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000004975, Bottlenosed dolphin)

Protein Percentage 93.01%
cDNA percentage 93.79%
Ka/Ks Ratio 0.40075 (Ka = 0.0338, Ks = 0.0845)

SLC18A2 ENSBTAG00000004739 (Cow)

Gene Details

synaptic vesicular amine transporter

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000006221, Cow)

Protein Percentage 91.49%
cDNA percentage 91.1%
Ka/Ks Ratio 0.18932 (Ka = 0.05, Ks = 0.2641)

SLC18A2  (Minke Whale)

Gene Details

solute carrier family 18 (vesicular monoamine transporter), member 2

External Links

Gene match (Identifier: BACU004688, Minke Whale)

Protein Percentage 94.89%
cDNA percentage 96.05%
Ka/Ks Ratio 0.46401 (Ka = 0.0326, Ks = 0.0702)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 1743 bp    Location:459661..424902   Strand:-
>bmy_08172
ATGGCCTTGAGCGAGCTGGCACTGCTCCGCTGGCTGCAGGAGAGCCGTCACTCGCGGAAGCTCATCCTGTTCATCGTGTTCCTCGCGCTGCTGCTGGACAACATGCTGCTCACCGTCGTGGTCCCCATCATCCCAAGTTACTTGTACAGCATCGAGCATGAGAAAGATGCTATAGAAATCCAGACTGCCAAGCCAGTGCTCAAAGCCTCCACCTTCGGCGGCTTCCAGAACATCTTCTCCTATTATGACAACTCCACCGTGGTCGCCGGCAATAGCACCGGCCACCTTCAGGGGGCGCTGCTGCATGAGGCCACCACGCAGCACACAGTGGCTAACAGGTCCACCGCCCCTTCCGACTGTCCCAGTGGAGACAAAGACCTCCTGAATGAGAACGTGCAGGTCGGCCTGTTGTTTGCCTCGAAAGCCACCGTCCAGCTCCTCACCAACCCGTTCATAGGACTGCTGACCAACAGAATCGGCTATCCAATTCCGATGTTCACGGGCTTCTGCATCATGTTTATCTCAACAGTTATGTTCGCCTTCTCCCGCAGTTACGTCTTCCTGCTGATCGCCAGGTCCCTGCAGGGCATCGGCTCCTCCTGCTCTTCTGTAGCTGGGATGGGCATGCTGGCCAGCGTGTACACAGATGACGAGGAGAGAGGCAATGCCATGGGGATTGCCCTGGGAGGCCTGGCCATGGGGGTCTTAGTGGGCCCCCCCTTTGGGAGTGTGCTGTACGAGTTTGTGGGGAAGACAGCTCCGTTCCTGGTGCTGGCTGCCCTGGTGCTCTTGGATGGAGCCATTCAGCTGTTTGTGCTCCAGCCGTCCCGGGTGCAGCCGGAGAGCCAGAAGGGGACGCCGCTAACCACCCTGCTGAAGGACCCGTACATCCTCATCGCCGCAGGGTCCATCTGCTTTGCAAACATGGGGATTGCCATGCTGGAGCCAGCCCTGCCCATCTGGATGATGGAGACCATGTGTTCCCACAAGTGGCAGCTGGGCGTTGCTTTCTTACCAGCTAGTATTTCTTATCTCATTGGAACCAATATTTTTGGGATCCTTGCGCACAAGATGGGGAGGTGGCTTTGTGCTCTTCTAGGAATGATAATTGTCGGAATCAGCATTTTATGTACAGTGGAGGACAAGGTGAGGCAAGGTGGAGAACAGCAAATGGTGGTCTGGGTTCCAGTCTCAGCCTCAAGCACCTTCAGTCTGTCTTCAGGCAAAGGCATGGTGGATTCGTCAATGATGCCCATCATGGGCTACCTGGTTGACCTGCGGCACGTGTCCGTCTATGGGAGTGTGTATGCCATTGCCGATGTAGCATTTTGTATGGGATATGCTATAGGTCCTTCCGCTGGTGGGGCTATCGCAAAGGCGATTGGATTTCCATGGCTCATGACAATTATTGGAATAATTGATATTCTTTTTGCTCCTCTCTGCTTTTTTCTCCGAAGTCCACCTGCCAAGGAAGAAAAAATGAACTCCCCAAATGTAAATGAGCCCAGGGCTGCCCAGTGGGCTTCCCTCGCCGAGCAGCAGACGTTAGTGGCTGCTGTGTTATCCGTTCGTCGGCAGCAGCGTGAGGGCTTATCTGAGGTCTTGGAGGAAGTGGATGAGGTCAGGGGACCAGGGGGGGCTATCCTCATGGATCACAACTGCCCCATTAAAACAAAAATGTATACTCAGAATAATATCCAGTCGTATCCGATAGGTGAGGATGAAGAATCTGAAAGTGACTGA

Related Sequences

bmy_08172T0 Protein

Length: 581 aa      View alignments
>bmy_08172T0
MALSELALLRWLQESRHSRKLILFIVFLALLLDNMLLTVVVPIIPSYLYSIEHEKDAIEIQTAKPVLKASTFGGFQNIFSYYDNSTVVAGNSTGHLQGALLHEATTQHTVANRSTAPSDCPSGDKDLLNENVQVGLLFASKATVQLLTNPFIGLLTNRIGYPIPMFTGFCIMFISTVMFAFSRSYVFLLIARSLQGIGSSCSSVAGMGMLASVYTDDEERGNAMGIALGGLAMGVLVGPPFGSVLYEFVGKTAPFLVLAALVLLDGAIQLFVLQPSRVQPESQKGTPLTTLLKDPYILIAAGSICFANMGIAMLEPALPIWMMETMCSHKWQLGVAFLPASISYLIGTNIFGILAHKMGRWLCALLGMIIVGISILCTVEDKVRQGGEQQMVVWVPVSASSTFSLSSGKGMVDSSMMPIMGYLVDLRHVSVYGSVYAIADVAFCMGYAIGPSAGGAIAKAIGFPWLMTIIGIIDILFAPLCFFLRSPPAKEEKMNSPNVNEPRAAQWASLAEQQTLVAAVLSVRRQQREGLSEVLEEVDEVRGPGGAILMDHNCPIKTKMYTQNNIQSYPIGEDEESESD*