Sequence detailsbmy_08172 (Coding sequence)

Part of scaffold_352 (SequenceType object (1))

For more information consult the page for scaffold_352 (SequenceType object (1))

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

SLC18A2ENSTTRG00000005278 (Bottlenosed dolphin)

Gene Details

solute carrier family 18 (vesicular monoamine), member 2

External Links

Gene match(Ensembl Protein ID:ENSTTRP00000004975, Bottlenosed dolphin)

Protein Percentage 93.01%
cDNA percentage 93.79%
Ka/Ks Ratio 0.40075 (Ka = 0.0338, Ks = 0.0845)

SLC18A2ENSBTAG00000004739 (Cow)

Gene Details

synaptic vesicular amine transporter

External Links

Gene match(Ensembl Protein ID:ENSBTAP00000006221, Cow)

Protein Percentage 91.49%
cDNA percentage 91.1%
Ka/Ks Ratio 0.18932 (Ka = 0.05, Ks = 0.2641)

SLC18A2 (Minke Whale)

Gene Details

solute carrier family 18 (vesicular monoamine transporter), member 2

External Links

Gene match (Identifier: BACU004688, Minke Whale)

Protein Percentage 94.89%
cDNA percentage 96.05%
Ka/Ks Ratio 0.46401 (Ka = 0.0326, Ks = 0.0702)

Additional orthologs identified in other species via the OPTIC pipeline.

SLC18A2 (Human)   Slc18a2 (Mouse)  

Genome Location

Sequence SequenceType object (2)

Length: 1743 bp    Location:459661..424902   Strand:-
Raw sequence 
>bmy_08172
ATGGCCTTGAGCGAGCTGGCACTGCTCCGCTGGCTGCAGGAGAGCCGTCACTCGCGGAAGCTCATCCTGTTCATCGTGTTCCTCGCGCTGCTGCTGGACAACATGCTGCTCACCGTCGTGGTCCCCATCATCCCAAGTTACTTGTACAGCATCGAGCATGAGAAAGATGCTATAGAAATCCAGACTGCCAAGCCAGTGCTCAAAGCCTCCACCTTCGGCGGCTTCCAGAACATCTTCTCCTATTATGACAACTCCACCGTGGTCGCCGGCAATAGCACCGGCCACCTTCAGGGGGCGCTGCTGCATGAGGCCACCACGCAGCACACAGTGGCTAACAGGTCCACCGCCCCTTCCGACTGTCCCAGTGGAGACAAAGACCTCCTGAATGAGAACGTGCAGGTCGGCCTGTTGTTTGCCTCGAAAGCCACCGTCCAGCTCCTCACCAACCCGTTCATAGGACTGCTGACCAACAGAATCGGCTATCCAATTCCGATGTTCACGGGCTTCTGCATCATGTTTATCTCAACAGTTATGTTCGCCTTCTCCCGCAGTTACGTCTTCCTGCTGATCGCCAGGTCCCTGCAGGGCATCGGCTCCTCCTGCTCTTCTGTAGCTGGGATGGGCATGCTGGCCAGCGTGTACACAGATGACGAGGAGAGAGGCAATGCCATGGGGATTGCCCTGGGAGGCCTGGCCATGGGGGTCTTAGTGGGCCCCCCCTTTGGGAGTGTGCTGTACGAGTTTGTGGGGAAGACAGCTCCGTTCCTGGTGCTGGCTGCCCTGGTGCTCTTGGATGGAGCCATTCAGCTGTTTGTGCTCCAGCCGTCCCGGGTGCAGCCGGAGAGCCAGAAGGGGACGCCGCTAACCACCCTGCTGAAGGACCCGTACATCCTCATCGCCGCAGGGTCCATCTGCTTTGCAAACATGGGGATTGCCATGCTGGAGCCAGCCCTGCCCATCTGGATGATGGAGACCATGTGTTCCCACAAGTGGCAGCTGGGCGTTGCTTTCTTACCAGCTAGTATTTCTTATCTCATTGGAACCAATATTTTTGGGATCCTTGCGCACAAGATGGGGAGGTGGCTTTGTGCTCTTCTAGGAATGATAATTGTCGGAATCAGCATTTTATGTACAGTGGAGGACAAGGTGAGGCAAGGTGGAGAACAGCAAATGGTGGTCTGGGTTCCAGTCTCAGCCTCAAGCACCTTCAGTCTGTCTTCAGGCAAAGGCATGGTGGATTCGTCAATGATGCCCATCATGGGCTACCTGGTTGACCTGCGGCACGTGTCCGTCTATGGGAGTGTGTATGCCATTGCCGATGTAGCATTTTGTATGGGATATGCTATAGGTCCTTCCGCTGGTGGGGCTATCGCAAAGGCGATTGGATTTCCATGGCTCATGACAATTATTGGAATAATTGATATTCTTTTTGCTCCTCTCTGCTTTTTTCTCCGAAGTCCACCTGCCAAGGAAGAAAAAATGAACTCCCCAAATGTAAATGAGCCCAGGGCTGCCCAGTGGGCTTCCCTCGCCGAGCAGCAGACGTTAGTGGCTGCTGTGTTATCCGTTCGTCGGCAGCAGCGTGAGGGCTTATCTGAGGTCTTGGAGGAAGTGGATGAGGTCAGGGGACCAGGGGGGGCTATCCTCATGGATCACAACTGCCCCATTAAAACAAAAATGTATACTCAGAATAATATCCAGTCGTATCCGATAGGTGAGGATGAAGAATCTGAAAGTGACTGA

Related Sequences

bmy_08172T0 SequenceType object (3)

Length: 581 aa      View alignments
>bmy_08172T0
MALSELALLRWLQESRHSRKLILFIVFLALLLDNMLLTVVVPIIPSYLYSIEHEKDAIEIQTAKPVLKASTFGGFQNIFSYYDNSTVVAGNSTGHLQGALLHEATTQHTVANRSTAPSDCPSGDKDLLNENVQVGLLFASKATVQLLTNPFIGLLTNRIGYPIPMFTGFCIMFISTVMFAFSRSYVFLLIARSLQGIGSSCSSVAGMGMLASVYTDDEERGNAMGIALGGLAMGVLVGPPFGSVLYEFVGKTAPFLVLAALVLLDGAIQLFVLQPSRVQPESQKGTPLTTLLKDPYILIAAGSICFANMGIAMLEPALPIWMMETMCSHKWQLGVAFLPASISYLIGTNIFGILAHKMGRWLCALLGMIIVGISILCTVEDKVRQGGEQQMVVWVPVSASSTFSLSSGKGMVDSSMMPIMGYLVDLRHVSVYGSVYAIADVAFCMGYAIGPSAGGAIAKAIGFPWLMTIIGIIDILFAPLCFFLRSPPAKEEKMNSPNVNEPRAAQWASLAEQQTLVAAVLSVRRQQREGLSEVLEEVDEVRGPGGAILMDHNCPIKTKMYTQNNIQSYPIGEDEESESD*