Part of scaffold_352 (Scaffold)

For more information consult the page for scaffold_352 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

VAX1 ENSBTAG00000013875 (Cow)

Gene Details

ventral anterior homeobox 1

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000032693, Cow)

Protein Percentage 96.68%
cDNA percentage 93.76%
Ka/Ks Ratio 0.0493 (Ka = 0.0144, Ks = 0.2921)

VAX1  (Minke Whale)

Gene Details

ventral anterior homeobox 1

External Links

Gene match (Identifier: BACU004686, Minke Whale)

Protein Percentage 86.11%
cDNA percentage 85.19%
Ka/Ks Ratio 0.001 (Ka = 0.0, Ks = 0.044)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 996 bp    Location:539056..543129   Strand:+
>bmy_08174
ATGTTCGGGAAACGAGACAAAATGGACGTTCGGTGCCACTCGGACGCAGAGGCTGCCCGGGTCTCGAAGAACGCGCACAAGGAGAGCCGGGAGAGCAAGGGCGCGGAGGGGAACCTCCCTGCTGCCTTCCTCAAGGAACCGCAGGGCGCCTTCTCTGCGTCGGGCGCCGCGGAAGATTGTAACAAAAGTAAATCCAATTCAACCGCGGATCCRGATTACTGCCGCCGGATCCTGGTCCGAGATGCCAAGGGGTCCATCCGAGAGATCATCCTGCCCAAGGGCCTGGACCTGGATCGGCCCAAGAGGACGCGCACTTCCTTCACCGCGGAGCAGCTCTACCGGCTGGAGATGGAGTTCCAGCGCTGCCAGTACGTGGTGGGCCGGGAGAGAACCGAGCTCGCTCGGCAGCTCAACCTCTCCGAGACCCAGGTGAAGGTCTGGTTCCAGAACCGGCGCACGAAGCAGAAGAAGGACCAAGGCAAGGACTCGGAGCTGCGCTCGGTGGTGTCGGAGACGGCGGCCACGTGCAGCGTGCTGCGGCTGCTGGAGCAGGGACGCCTGCTGTCGCCGCCCGGCCTGCCTGCGCTGCTGCCGCCATGCGCCACAGGCGCGCTCGGCTCGGCGCTACGCGGGCCCAGCCTGCCGGCCCTGGGCGCGGGCTCTGCCGCGGGCTCGGCAGCCGCCGCCGCCCCGGGTCCAGCAGGCGCCGCGTCCCCGCACCCGCCGGCCGTGGGAGGCGCTCCGGGCCCCGGGCCCACCGGGCCAGGGGGACTGCACGCGGGCGCACCGGCCGCCGGCCACGGCCTCTTCAGCCTGCCCGTGCCTTCGCTGCTCGGATCCGTCGCTAGCCGCCTTTCCACCGCCCCGTTGACAATGGCCGGTTCGCTGGCCGGGAATTTGCAAGAACTCTCCGCCCGATACCTGAGCTCCTCGGCCTTCGAACCTTACTCCCGGACCAACAATAAAGAAGGGGCCGAGAAAAAAGCGCTGGACTGA

Related Sequences

bmy_08174T0 Protein

Length: 332 aa      View alignments
>bmy_08174T0
MFGKRDKMDVRCHSDAEAARVSKNAHKESRESKGAEGNLPAAFLKEPQGAFSASGAAEDCNKSKSNSTADPDYCRRILVRDAKGSIREIILPKGLDLDRPKRTRTSFTAEQLYRLEMEFQRCQYVVGRERTELARQLNLSETQVKVWFQNRRTKQKKDQGKDSELRSVVSETAATCSVLRLLEQGRLLSPPGLPALLPPCATGALGSALRGPSLPALGAGSAAGSAAAAAPGPAGAASPHPPAVGGAPGPGPTGPGGLHAGAPAAGHGLFSLPVPSLLGSVASRLSTAPLTMAGSLAGNLQELSARYLSSSAFEPYSRTNNKEGAEKKALD*