Part of scaffold_352 (Scaffold)

For more information consult the page for scaffold_352 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

HSPA12A ENSTTRG00000000372 (Bottlenosed dolphin)

Gene Details

heat shock 70kDa protein 12A

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000000349, Bottlenosed dolphin)

Protein Percentage 97.58%
cDNA percentage 97.37%
Ka/Ks Ratio 0.15607 (Ka = 0.012, Ks = 0.0766)

HSPA12A ENSBTAG00000013779 (Cow)

Gene Details

Uncharacterized protein

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000018304, Cow)

Protein Percentage 96.82%
cDNA percentage 94.35%
Ka/Ks Ratio 0.06488 (Ka = 0.0151, Ks = 0.2333)

HSPA12A  (Minke Whale)

Gene Details

heat shock 70kDa protein 12A

External Links

Gene match (Identifier: BACU004683, Minke Whale)

Protein Percentage 99.08%
cDNA percentage 99.03%
Ka/Ks Ratio 0.14724 (Ka = 0.0041, Ks = 0.0281)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 1986 bp    Location:897373..930774   Strand:+
>bmy_08177
ATGGCCCCTACATCTGCATGTTCATCTCCAGCCCGGAGTCTGGGGGACACAGGAATAACACCTCTGTCCCCATCCCACACTGTGAACGATGCTGACCCAAACGTCTCTGAGCAGCAGACGTTTCTCGTGGTGGTGGCTGTCGACTTTGGGACCACATCCAGCGGCTATGCCTACAGCTTCACCAAGGAGCCAGAATGCATCCATGTGATGAGGCGGTGGGAAGGAGGCGACCCTGGGGTGTCCAACCAGAAGACTCCGACCACCATCTTGTTGACTCCGGAGAGGAAGTTCCACGGTTTCGGGTATGCCGCCAGGGACTTTTACCACGACCTGGATCCCAGTGAGGCCAAGCAGTGGCTGTACCTGGAGAAGTTCAAGATGAAGCTGCACACCACCGGGGACCTCACCATGGATACAGACCTGACGGCAGCAAATGGCAAGAAAATCAAAGCCCTTGAAATCTTTGCTTATGCCCTGCAGTACTTTAAGGAACAGGCGCTGAAGGAGCTGAGCGATCAGACTGGTTCAGAGTTCGAGAACTCTGATGTCAGATGGGTTATCACAGTGCCTGCCATCTGGAAACAGCCCGCCAAGCAGTTCATGAGACAAGCTGCCTACCAGGCAGGCCTGGCTTCCCCCGAGAACTCGGAGCAACTCTTCATTGCCTTGGAGCCCGAGGCGGCCTCCATCTACTGCCGGAAGCTGCGGTTACACCAGATGACTGAGCTGAGCAGCAAGGCCACGGTCAATGGGTACAGCTCCAGTGACACAGTAGGAGCTGGGTTTGCACAGGCTAAGGAACACGTACGACGTAATCGGCAGAGTCGGACCTTTTTGGTGGAGAATGTCATAGGAGAAATCTGGTCCGAGCTGGAGGAAGGTGACAAGTATGTGGTAGTGGACAGTGGCGGTGGCACCGTAGACGTGACAGTCCATCAGATATGGTTACCGGAGGGACACCTTAAAGAACTGTACAAAGCAACAGGTGGACCCTATGGATCTTTAGGAGTAGATTATGAATTTGAAAAGCTTCTGTGTAAAATATTCGGAGAGGATTTTATTGAGCAATTCAAAATCAAGCGTCCTGCGGCCTGGGTTGACTTAATGATTGCATTTGAGTCTCGCAAAAGGGCAGCTGCCCCGGACCGAACTAACCCGCTGAACATCACCCTGCCCTTCTCCTTCATTGACTACTACAAGAAGTTCCGTGGGCACAGTGTGGAGCACGCCTTGAGGAAGAGCAATGTGGATTTTGTGAAGTGGTCCTCGCAGGGGATGCTGAGGATGAGTCCAGATGCCATGAATGCCCTTTTTAAGCCGACCATTGATAGCATCATTGAGCATCTCCGGGACCTGTTTCAGAAGCCGGAGGTGTCCACGGTCAAGTTCCTCTTCCTGGTGGGCGGCTTCGCCGAGGCGCCCCTCCTGCAGCAGGCAGTGCAGGCTGCCTTCGGCGACAAGTGCCGTATCATCATCCCCCAGGACGTGGGCCTCACCATCCTCAAGGGCGCCGTCCTCTTCGGCCTGGACCCCGCTGTCATCAAGGTGCGCCGGTCCCCGCTCACCTACGGGGTTGGGGTGCTGAACCGCTACGTGGAGGGCAAGCACCCGCCCGAGAAGCTGCTGGTGAAGGACGGCACTCGCTGGTGCACTGACGTCTTCGACAAGTTCATCTCCGCTGACCAGTCCGTGGCCCTGGGTGAGCTGGTCAAGCGCAGCTACACCCCGGCCAAGCCCTCCCAGCTGGTCATTGTCATCAACATCTATAGCTCTGAGCTCGACAACGTGAGCTTCATCACCGACCCCGGGGTGAAGAAGTGCGGCACGCTGCGCCTCGATCTCACGGGGGCCAGCGGCACTGCCGTGCCCACCCGCAGGGAGATCCAGACCCTCATGCAGTTCGGGGACACCGAGATCAAGGCCACGGCCATTGATGTAGCCACCTCCAAGAGTGTCAAGGTTGGGATCGACTTCTTAAATTACTAA

Related Sequences

bmy_08177T0 Protein

Length: 662 aa      View alignments
>bmy_08177T0
MAPTSACSSPARSLGDTGITPLSPSHTVNDADPNVSEQQTFLVVVAVDFGTTSSGYAYSFTKEPECIHVMRRWEGGDPGVSNQKTPTTILLTPERKFHGFGYAARDFYHDLDPSEAKQWLYLEKFKMKLHTTGDLTMDTDLTAANGKKIKALEIFAYALQYFKEQALKELSDQTGSEFENSDVRWVITVPAIWKQPAKQFMRQAAYQAGLASPENSEQLFIALEPEAASIYCRKLRLHQMTELSSKATVNGYSSSDTVGAGFAQAKEHVRRNRQSRTFLVENVIGEIWSELEEGDKYVVVDSGGGTVDVTVHQIWLPEGHLKELYKATGGPYGSLGVDYEFEKLLCKIFGEDFIEQFKIKRPAAWVDLMIAFESRKRAAAPDRTNPLNITLPFSFIDYYKKFRGHSVEHALRKSNVDFVKWSSQGMLRMSPDAMNALFKPTIDSIIEHLRDLFQKPEVSTVKFLFLVGGFAEAPLLQQAVQAAFGDKCRIIIPQDVGLTILKGAVLFGLDPAVIKVRRSPLTYGVGVLNRYVEGKHPPEKLLVKDGTRWCTDVFDKFISADQSVALGELVKRSYTPAKPSQLVIVINIYSSELDNVSFITDPGVKKCGTLRLDLTGASGTAVPTRREIQTLMQFGDTEIKATAIDVATSKSVKVGIDFLNY*