Sequence detailsbmy_08209 (Coding sequence)

Part of scaffold_360 (SequenceType object (1))

For more information consult the page for scaffold_360 (SequenceType object (1))

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

PADI4ENSTTRG00000005052 (Bottlenosed dolphin)

Gene Details

peptidyl arginine deiminase, type IV

External Links

Gene match(Ensembl Protein ID:ENSTTRP00000004817, Bottlenosed dolphin)

Protein Percentage 38.8%
cDNA percentage 42.62%
Ka/Ks Ratio 0.39528 (Ka = 0.1667, Ks = 0.4217)

PADI4ENSBTAG00000012052 (Cow)

Gene Details

protein-arginine deiminase type-4

External Links

Gene match(Ensembl Protein ID:ENSBTAP00000015991, Cow)

Protein Percentage 73.63%
cDNA percentage 79.85%
Ka/Ks Ratio 0.24639 (Ka = 0.1705, Ks = 0.6918)

PADI4 (Minke Whale)

Gene Details

peptidyl arginine deiminase, type IV

External Links

Gene match (Identifier: BACU005695, Minke Whale)

Protein Percentage 66.94%
cDNA percentage 75.87%
Ka/Ks Ratio 0.60524 (Ka = 0.2739, Ks = 0.4525)

Genome Location

Sequence SequenceType object (2)

Length: 1107 bp    Location:711208..690656   Strand:-
Raw sequence 
>bmy_08209
ATGAGAGCTGCCAGCGACAGCACAGAAATCTCCTTGAGCGCGGACTTCACTCGCACTGGCAAAATGAAGTCCACCGGAGGCAGGAAGGACCAGAGGACCTGGACCTGGGGCCCTCATGGGCAGGGCGCCATCCTGCTTGTGAACTGTGACAGAGACAGTCCCATATCTCCCACTGTGGATTGCAAGGATGACCAGCTTGACAGCAAAGACCTGAAGGACATGTCCTTGGTGACCCTGAGCACGAAGACCCCCAGGGACTTCTTCAGCAAGCACCGGCTGGTGCTCCATGTGGCCAAATCCGAGATGGACAAAGTCAGGGTGTTTCGAGCCAATGGCAGCACGTGTAACAGCCTCCCCTCCACTCGCTCTTCACAGGATGAGATGGAGATCGGCTACATCCAAGCCCCACACAAAACGCTGCCCGTGGTCTTTGACTCCCCAAGGAACAGAGGCCTGAAGGATTTCCCCATCAAATGCATGCTGGGTCCAGATTTTGGCTACATGACTCGAGTGCCCCAAACAGGGAGAGTTACTGACCTCGACTCCTTTGGGAACCTGGAAGTGAGCCCCCCCGGTGACAGTCGGGGAGAAGGAATACCCGCTGGGCAGGATTCTCACTGGGGACAGCGGTTACCCCAGGAAAGCCAGGAGATGCACCAGGACCTGCAGGATTTCCTCAGTGCCCAGCAGGTGCAGGCCCCCGTGAAACTCTACTCCGACTGGCTGTCTGTGGGCCACGTGGATGAGTTCGTGAGCTTCGTTCCAGTGCACAAGAAGGGTTTCTGCCTCCAGGGCTTCCGGCTGCTCCTGGCCAGCCCCAGGTCCTGCTACAAACTGTTCCAGGAGCGGATGAAGGATGGCCATGGGGAGGCTCTGCTGTTCCAAGGGGTCAAGAGTAAGTTGGCCGTGCCTCCCCACCCCACCCACCGCCGTCCCCTCCTCCCGCCCCCCCAGAAATACATCGACTGGAACCGGGAGGTGCTGAAGCGGGAGCTGGGCCTGACGGAGCGGGACATCGTGGACATCCCCCAGCTCTTCAAGCTCCAGAAAGGCTTCGAAGGGACCCTCAAGGCTGAAGCCTTTTTCCCAAACATGGTGAGGAAGTGA

Related Sequences

bmy_08209T0 SequenceType object (3)

Length: 369 aa      View alignments
>bmy_08209T0
MRAASDSTEISLSADFTRTGKMKSTGGRKDQRTWTWGPHGQGAILLVNCDRDSPISPTVDCKDDQLDSKDLKDMSLVTLSTKTPRDFFSKHRLVLHVAKSEMDKVRVFRANGSTCNSLPSTRSSQDEMEIGYIQAPHKTLPVVFDSPRNRGLKDFPIKCMLGPDFGYMTRVPQTGRVTDLDSFGNLEVSPPGDSRGEGIPAGQDSHWGQRLPQESQEMHQDLQDFLSAQQVQAPVKLYSDWLSVGHVDEFVSFVPVHKKGFCLQGFRLLLASPRSCYKLFQERMKDGHGEALLFQGVKSKLAVPPHPTHRRPLLPPPQKYIDWNREVLKRELGLTERDIVDIPQLFKLQKGFEGTLKAEAFFPNMVRK*