Part of scaffold_360 (Scaffold)

For more information consult the page for scaffold_360 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

PADI1 ENSTTRG00000015557 (Bottlenosed dolphin)

Gene Details

peptidyl arginine deiminase, type I

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000014743, Bottlenosed dolphin)

Protein Percentage 87.74%
cDNA percentage 92.96%
Ka/Ks Ratio 0.54954 (Ka = 0.0658, Ks = 0.1198)

PADI1 ENSBTAG00000002138 (Cow)

Gene Details

protein-arginine deiminase type-1

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000015977, Cow)

Protein Percentage 80.06%
cDNA percentage 86.66%
Ka/Ks Ratio 0.28807 (Ka = 0.1082, Ks = 0.3757)

PADI1  (Minke Whale)

Gene Details

peptidyl arginine deiminase, type I

External Links

Gene match (Identifier: BACU005694, Minke Whale)

Protein Percentage 95.02%
cDNA percentage 96.89%
Ka/Ks Ratio 0.4358 (Ka = 0.0257, Ks = 0.0589)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 1944 bp    Location:755892..736467   Strand:-
>bmy_08211
ATGCTCTCCTCTCTCCTTTCTATCAGTGATGTGCCCAAGGGTGCTGAGACCTTCAGGGTCTCTGGGAGCTCCGGGGTGGAGGTCTTCACGGTCTACAACACAGCACAGGTGACAGAGCCCACAGATAAGGCCCACTGGCCCCTGGATGCCGGCGTGGACGTGATCATATCTGTGGACGCAGCCAGTAAGGCTTTAAACGATCTCAAGGTGAACGTCTCCTACTTCGGGCGGCAGAAGGACAGTGCCTTGGGCCACAGTGTGCTCTACCTCACTGGCGCCGACATCTCCCTCGACGTCGACACGGGCCGCACGGGCAAGGTGAAGAGGAGCCAAGGTGACAAGAAAACCTGGCGCTGGGGCCCTGAGGGCTACGGGGCTGTCCTGCTGGTAAACTGTGACCGGGATAGTCTCAGGTCCAGGGGGATCGACCTCGCCAACACCCAGCTGACATCACTGGATGACCTGCAGGACATGGCCCCAATGGTGCTGAGCTGCGATGGCCCTGATGAGCTCTTTGACAGCCACAAGCTGGTCTTGAACGTGCCGCTTTCTGATTCCAGGAGAGTGGGGGTCTTCTGCGCTAGGGGTGGGAATTCTCTCTCAGACTACAAGCAGGTGCTGGGGCCCTGGCGTCTGTCCTACGAAGTGGAGCGGCATCCGGGGGAGCGGAAGATCAGCTTCTACGTGGAGGGGCTCACCTTTCCCGATGCTCATTTCTTGGGGCTGGTCTCTCTCAGCGTCAGCCTGGTGGACACCAAGACCCTGCCTGAGGTGCCCCACTTCACAGACACCGTGACCTTCCGCGTGGCCCCCTGGATCATGACCCCCAACACCCAATGCCCCCTGGAGCTGTATGTGTGCAGTGTCGTAGACTCCCATGGCTCAAATGAGAAGTTTCTGAAAGACGTGTCTGACCTGGCGTCGAAAGCCAACTGCAAGCTGATCGTCTGCCCTTGGATTGAGAATCGGAATGACCGCTGGATCCAGGATGAGATGGAGTTTGGCTACATCGAGGCTCCTCACAAATCCTTCCCAGTGGTCTTTGACTCCCCCCGAGACAGACACCTGAAGTATTTCCCTTATAAGAGTATCCTGGGTCCCGACTTTGGATATGTAACCCAGGAAATCCCGTTCGCTGGTGTCTCTGGCCTTGACTCCTTCGGCAACCTGGAAGTCAGCCCGCCTGTCACAGTGGAGGGCAAGGAGTACCCCCTGGGCCGAATCCTCATTGGCAGCAGCTTCCCCAAGTCTGGCGGGCAGCGAATGGCCAAGGTGGTGCGCGACTTCCTGAAGGCCCAGCAGGTGCAGGCGCCCGTGGAGCTCTACTCTGACTGGCTCTACGTGGGCCACGTGGACGAGTTCCTGAGCTTTGTGCCCACCTCCGACCAGAAGGGCTTCCGGCTGCTCCTGGCCAGCCCCAGCGCTTGCCTCAAGCTGTTCCAAGAGAAGAAGGAGGAGGGCTACGGGGAGGCGGCCCAGTTTGATGGGTTAAAGCGCCAGGTGAAGAGAAGCATTAATGAGATGCTGGAAGACAGCCGTCTCAGGAATGACAGCCTCCATGTACAGGACATCGTGGACGTCCCCCAGCTCTTCTTCCTGAAGGATTTCTATGCAGAAGCCTTCTTCCCCAACATGGTGAGAGCRTGGAGGGAGGACAGGTCATTTCCATCCTTGGTGCTGGGCGGGGTCCTGCTGGGCGGTCAGTTGGGGGTGAACATGGTGGTCTTAGGCAAGTACCTGGGCATCCCCAAACCCTTCGGGCCCATAATCAACGGCAGCTGCTGTCTGGAGGAGAAGGTGCGGTCCCTTTTGGAGCCTCTGGGCCTCTACTGTATCTTCATCGATGATTACTTGTCCTACCACAAGCTGCTTGGAGAGATCCACTGCGGCACCAACGTGCGCCGGAAGCCCTTTCCCTTCAAGTGGTGGCACATGGTGCCCTGA

Related Sequences

bmy_08211T0 Protein

Length: 648 aa      View alignments
>bmy_08211T0
MLSSLLSISDVPKGAETFRVSGSSGVEVFTVYNTAQVTEPTDKAHWPLDAGVDVIISVDAASKALNDLKVNVSYFGRQKDSALGHSVLYLTGADISLDVDTGRTGKVKRSQGDKKTWRWGPEGYGAVLLVNCDRDSLRSRGIDLANTQLTSLDDLQDMAPMVLSCDGPDELFDSHKLVLNVPLSDSRRVGVFCARGGNSLSDYKQVLGPWRLSYEVERHPGERKISFYVEGLTFPDAHFLGLVSLSVSLVDTKTLPEVPHFTDTVTFRVAPWIMTPNTQCPLELYVCSVVDSHGSNEKFLKDVSDLASKANCKLIVCPWIENRNDRWIQDEMEFGYIEAPHKSFPVVFDSPRDRHLKYFPYKSILGPDFGYVTQEIPFAGVSGLDSFGNLEVSPPVTVEGKEYPLGRILIGSSFPKSGGQRMAKVVRDFLKAQQVQAPVELYSDWLYVGHVDEFLSFVPTSDQKGFRLLLASPSACLKLFQEKKEEGYGEAAQFDGLKRQVKRSINEMLEDSRLRNDSLHVQDIVDVPQLFFLKDFYAEAFFPNMVRAWREDRSFPSLVLGGVLLGGQLGVNMVVLGKYLGIPKPFGPIINGSCCLEEKVRSLLEPLGLYCIFIDDYLSYHKLLGEIHCGTNVRRKPFPFKWWHMVP*