Sequence details bmy_08217 (Coding sequence)

Part of scaffold_360 (Scaffold)

For more information consult the page for scaffold_360 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

CROCC ENSTTRG00000015489 (Bottlenosed dolphin)

Gene Details

ciliary rootlet coiled-coil, rootletin

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000014696, Bottlenosed dolphin)

Protein Percentage 84.97%
cDNA percentage 87.58%
Ka/Ks Ratio 0.26443 (Ka = 0.0431, Ks = 0.163)

CROCC ENSBTAG00000003822 (Cow)

Gene Details

Uncharacterized protein

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000040412, Cow)

Protein Percentage 84.87%
cDNA percentage 88.02%
Ka/Ks Ratio 0.10851 (Ka = 0.0761, Ks = 0.7009)

Additional orthologs identified in other species via the OPTIC pipeline.

CROCC (Human)   Crocc (Mouse)  

Genome Location

Sequence Coding sequence

Length: 3300 bp    Location:1013124..971930   Strand:-
Raw sequence 
>bmy_08217
ATGAACTTGGGGCTGGAGGGGTCGTTGAAGGCCCAGCTGGCACTGGAGGCGGTTATCCAGACACTGGAGAGCAGCATCCTGGGGTCGGGCCAGGAGAAGGGCCTGAACGTGCAGGACCGGGCCCAGGATTCCCAGCCCACCTGCCTGCCTGCCCGCATCAGGGAGATTGTCACCCGCAACTTCTCCCAGCCTGAGAGCCCAGCCCTGCTGCCGGCCGCCGAGATGGCATCCATGCTGTCACTGCAGGAGGAGAACCAGCTTCTGCAGCAGGAGCTGTCCCGCGTGGAGGACCTGCTGGCCCAGAGCCGGGCTGAGCGCGATGAACTGGCCATCAAGTACAACGCGGTCAGCGAGAGGCTGGAGCAGGCTGTGCGGCTGGAATCTGGGGAGCTGGAAACACAGGAGCCCAGGGGGCTGGCACGGCAGAGCGTGGAGCTGCGGAGGCAGCTGCAGGAGGAGCAGGCCTCCTACCGGCGCAAGCTGCAGGCCTACCAGGAGGGCCAGCAGCGGCAGGCCCAGCTCGTGCAGCGGCTGCAGGCCAAGATTCTCCAGTACAAGAAGAAGACCTCGGAGATGGAGGAGCAGCTGCTGGAGAGAGCCACGGAGCTGGAGCAGCGGCGGCTGAGGGACACAGAGCACAGCCATGACCTAGAGAGCGCCCTCATCCGCCTGGAGGAGGAACAGCAGAGAAGCGCCAGCCTGGCCCAGGTGAACGCTATGCTCCGAGAGCAGCTGGACCAGGCGAACTCGGCCAACCAGGCTCTGAGTGAGGACATACGCAAGGTGACCAGCGACTGGACACGCAGCCGCCAGGAGCTGGAGCAGCGGGAGGCAGCGTGGAGGCGCGAGGGAGAGTCTTTCAACGCCTACTTCAGCCATGAGCACAGCCGCCTGCTTCTCCTGTGGAGGCAGGCTGTGGGGGCCCGACGGCTGCTCAGCGAGGTGAAGATGTCCACCGAGAGGGACCTGCTGCAGCTGGGAGGGGAGCTGGCCCGGACCTCACGGGCTGTCCAGGAGGCGGGCCTGGGGCTGAGCGCAGGCCTGCGGCTGGCCGAGAGCCGGGCCGAGGCGGCCCTGGAGAAGCAGGCCCTGCTGCAGGCCCAGCTGGAGGAGCAGCTGCGGGACAAGGTGCTCCAGGAGAAGGACCTGGCCCAGCTGCAGGTGCAAAGCAACCTGGACAAGGCCGACCTCAGTGCCAGAGTGACTGAGCTGGCCCTGACAGTCGAGCGCCTTCAGAACCAGAATCTGGAAAAGGATCGGCTCAACAAGGCCCTCACTGAGAAGCTTGAGGCCCTGGAATCCCTGCGGCTCCAGGAGCAGGCGGCCCTGGAGACGGAGGATGGAGAGGGGCTGCAGCAGACCCTGAGGGACCTGGCACAGGCCGTCCTGTCAGACATGGAGAGCGGCGTCCAGTTAAGTGGCTCCTTGCGTACAGCGGCCGCATCGGACGGCAGCCTGCGGGGGCTCTCGGGGGCCCGGACGCCGTCCCCACCGAGGCGCTCCTCGCCCGGCCGTGGCCGTTCCCCCTGCCGAGGCCCATCCCCTGCCTGCTCGGACTCCTCCACACTAGCCCTGATTCACTCCGCTCTGCACAAGCGTCAGCTGCAGGTCCAGGACATGCGGGGGCGCTATGAGGCCAGTCAGGACCTCCTGGGCACCCTGCGGAAGCAGCTTAGTGACAGCGAGGGTGAGCGCCGTGCCCTTGAGGAACAGCTGCAGCGTCTTCGGGATAAGACCGACCAGGCTGCCCAGGCCCAGGAGGATGTGCAGCGGGAGGCCCAGCGCCTGCACAGTGCTGTCGACCTCCTGAACAGGGAGAAGGACAGCCTAGCCCACAGCCTGCAGGTGGCCCAGCAGCAGGCTGAGGAGCTACGGCAGGAGCGGGAGAAGCTGCATGCGGCCCAGGAGGAGCTGCGGCGCCAGCGGGACCAGCTGGAGGAAGAGCGGGAGGACACAGCACAGGACAGTGCATGGACACGCAGGGAGCTCGAGCGCAGCCATAGACAGCTAGAGCAGCTGGAAGTGAAGCGCTCAGGGCTGGCGAAGGAGCTGGTGGAGGTGAGGGAGGCGCTGAGCTGTACCACGCTGCAGCGGGACATGCTGCAGGCTGAGAAGGCCGAGGTGGCCGAGGCGCTGACCAAGGCTGAGGCTGGCCGCGTGGAGCTTGAGCTCTCCATGACCAAGCTGAGGGCCGAGGAGGCCTCTCTGCGGGACTCCTTATCCAAGCTGAGCGCCCTGAACGAGAGTCTTGCCCAGGACAAGCTGGGTCTGAACCGCCTTGTCGCCCAGCTAGAAGAGGAAAAGGCAGCCCTGCTGGGCCGGCAGCGGCAGGTGGAGCAGGCGGCCGCCTCCGCGCGGGAGGGGCAGGAGCAGCTGGCGCAGCTGCGGCTGGAGCAGGAGGCGGAGCGCCAAGGCCTGGAGGGCTCCCTGCGGGTGGCAGAGCAGGCCCGCGAGGCCCTGGAGCGCCAGCTCCCTGACTTGCACCAGGAGCGCTGCCGGCTGCAGGAGCGGCTGGCCCAGCTCTCCCGGCAGCTGAGCGGGCGGGAGCAGGAGCTGGAGCAGGCCCGGCGGGAGATGCAGCGGCAGACGGAGGCGTTGGAGCGGGCGGCCCGGGAGAAGGAGGCGCTGGCCAAGGAGCGGGCCGGCCTGGCGGTGCAGCTGGCAGCAGCCGAGCGTGAAGGCCGGACCCTGTCGGAGGAGGCCACACGCCTGCGCTTGGAGAAGGAAGCTCTGGAGAGCAGCCTGTTTGAGGTGCAGCGGCAGCTGGCGCAGCTCGAGGCCCGGCGGGAGCAGCTGGAAGCGGATGGGCAGGCCCTGCTGCTGGCCAAGGAGACCCTGACCGGGGAGTTGGCGGGCTTGCGGCAGCAGATAACAACTACAGAGGAGAAGGTCGCTCTGGACAAGGAACTGATGGCCCAGAAGTTAGTGCAGGCTGAGCGGGAGGCCCAGGCCTCCCTGCGGGAGCAGCGGGCAGCCCACGAGGAGGACTTACAGCGACTCCAGCGAGAGAAGGAGGCGGCATGGCGGGAGCTGGAGGCAGAGCGGGCCCAGCTGCAGAGTCAGCTGCAGCGGGAGCGGGAGGAGCTGCTGGCCCGGCTGGAGGCCGAGAAGGAAGAGCTGAGCGAGGAGATCGCCGCCCTGCAGCAGGAGCGTGACGAGGGCCTCCTCCTGGCCGAGAGCGAGAAGCAGCAGGCTGGGCATGGCGTCCCCATGACCGCCTCTGAGCAGTCCCCGCGAAGCCCACATGCAGCAGCTGACCCTCCTCAGAAAGAACTAACTCCTGACTTTCCCATAATGTAA

Related Sequences

bmy_08217T0 Protein

Length: 1100 aa      View alignments
>bmy_08217T0
MNLGLEGSLKAQLALEAVIQTLESSILGSGQEKGLNVQDRAQDSQPTCLPARIREIVTRNFSQPESPALLPAAEMASMLSLQEENQLLQQELSRVEDLLAQSRAERDELAIKYNAVSERLEQAVRLESGELETQEPRGLARQSVELRRQLQEEQASYRRKLQAYQEGQQRQAQLVQRLQAKILQYKKKTSEMEEQLLERATELEQRRLRDTEHSHDLESALIRLEEEQQRSASLAQVNAMLREQLDQANSANQALSEDIRKVTSDWTRSRQELEQREAAWRREGESFNAYFSHEHSRLLLLWRQAVGARRLLSEVKMSTERDLLQLGGELARTSRAVQEAGLGLSAGLRLAESRAEAALEKQALLQAQLEEQLRDKVLQEKDLAQLQVQSNLDKADLSARVTELALTVERLQNQNLEKDRLNKALTEKLEALESLRLQEQAALETEDGEGLQQTLRDLAQAVLSDMESGVQLSGSLRTAAASDGSLRGLSGARTPSPPRRSSPGRGRSPCRGPSPACSDSSTLALIHSALHKRQLQVQDMRGRYEASQDLLGTLRKQLSDSEGERRALEEQLQRLRDKTDQAAQAQEDVQREAQRLHSAVDLLNREKDSLAHSLQVAQQQAEELRQEREKLHAAQEELRRQRDQLEEEREDTAQDSAWTRRELERSHRQLEQLEVKRSGLAKELVEVREALSCTTLQRDMLQAEKAEVAEALTKAEAGRVELELSMTKLRAEEASLRDSLSKLSALNESLAQDKLGLNRLVAQLEEEKAALLGRQRQVEQAAASAREGQEQLAQLRLEQEAERQGLEGSLRVAEQAREALERQLPDLHQERCRLQERLAQLSRQLSGREQELEQARREMQRQTEALERAAREKEALAKERAGLAVQLAAAEREGRTLSEEATRLRLEKEALESSLFEVQRQLAQLEARREQLEADGQALLLAKETLTGELAGLRQQITTTEEKVALDKELMAQKLVQAEREAQASLREQRAAHEEDLQRLQREKEAAWRELEAERAQLQSQLQREREELLARLEAEKEELSEEIAALQQERDEGLLLAESEKQQAGHGVPMTASEQSPRSPHAAADPPQKELTPDFPIM*