Part of scaffold_360 (Scaffold)

For more information consult the page for scaffold_360 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

NECAP2 ENSBTAG00000013282 (Cow)

Gene Details

Adaptin ear-binding coat-associated protein 2

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000017663, Cow)

Protein Percentage 92.03%
cDNA percentage 93.09%
Ka/Ks Ratio 0.22195 (Ka = 0.0398, Ks = 0.1791)

NECAP2  (Minke Whale)

Gene Details

NECAP endocytosis associated 2

External Links

Gene match (Identifier: BACU018223, Minke Whale)

Protein Percentage 99.2%
cDNA percentage 99.6%
Ka/Ks Ratio 0.95322 (Ka = 0.004, Ks = 0.0042)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 804 bp    Location:1043271..1031178   Strand:-
>bmy_08218
ATGGAGGAAGGCGAGTACGAGTCTGTTCTGTGTGTCAAGCCAGAGGTCCACGTCTACCGCATCCCGCCGCGGGCCACCAACCGTGGTTACAGGGCTGCGGAATGGCAGCTGGACCAGCCATCATGGAGTGGCCGGCTGCGGATCACTGCAAAAGGGCAGGTGGCCTACATCAAGCTGGAGGACAGGACCTCAGGGGAGCTCTTTGCTCAGGCCCCAGTGGATCAGTTTCCAGGCACAGCTGTGGAGAGCGTGATGGATTCCAGCAGGTACTTCGTTATCCGCATCGAAGATGGAAACGGGCGACGGGCGTTTATTGGAATTGGCTTCGGGGACCGAGGTGATGCCTTTGACTTCAATGTTGCCTTGCAGGACCATTTCAATTGCTACCCCGCTGCTGCAGTAAAAGCCTCGTCCTGGACTGGTGGCAGGTGGGTGAAACAGCAGTGTGAATTTGCAAAACAAGCCGAGAACCCAGATCAAGGTCCCAAATTGGACCTAAGCTTCAAGGAGGGCCAGACCATCAAGCTCAACATCGCAAACATGAAGAAGAGGGAAGGAGCAGCTGGGACTCCCCGAGCCCGGCCCGCCAGCACAGGAGGACTGAGCCTGCTTCCCCCTCCCCCAGGGGGGAAAACCTCCACCCTGATCCCTCCCCCTGGGGAGCAGTTGTCTGTGGGGGCGTCCATCGTCCAGCCAGCAGTTGCTCCCAGTTCAGGAGGTGCCACTGTGTCCTGGCCGCAGCCCAAGCCTGCCGCTACTGCCACCGCCGACATCTGGGGAGACTTTACCAAATCCACAGGGTGA

Related Sequences

bmy_08218T0 Protein

Length: 268 aa      View alignments
>bmy_08218T0
MEEGEYESVLCVKPEVHVYRIPPRATNRGYRAAEWQLDQPSWSGRLRITAKGQVAYIKLEDRTSGELFAQAPVDQFPGTAVESVMDSSRYFVIRIEDGNGRRAFIGIGFGDRGDAFDFNVALQDHFNCYPAAAVKASSWTGGRWVKQQCEFAKQAENPDQGPKLDLSFKEGQTIKLNIANMKKREGAAGTPRARPASTGGLSLLPPPPGGKTSTLIPPPGEQLSVGASIVQPAVAPSSGGATVSWPQPKPAATATADIWGDFTKSTG*