Part of scaffold_361 (Scaffold)

For more information consult the page for scaffold_361 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

LGI1 ENSTTRG00000004228 (Bottlenosed dolphin)

Gene Details

leucine-rich, glioma inactivated 1

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000003973, Bottlenosed dolphin)

Protein Percentage 99.14%
cDNA percentage 98.85%
Ka/Ks Ratio 0.13075 (Ka = 0.0042, Ks = 0.0319)

BT.35117 ENSBTAG00000005106 (Cow)

Gene Details

leucine-rich glioma-inactivated protein 1 precursor

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000006728, Cow)

Protein Percentage 98.56%
cDNA percentage 96.25%
Ka/Ks Ratio 0.05281 (Ka = 0.0076, Ks = 0.1441)

LGI1  (Minke Whale)

Gene Details

leucine-rich, glioma inactivated 1

External Links

Gene match (Identifier: BACU012458, Minke Whale)

Protein Percentage 99.14%
cDNA percentage 98.92%
Ka/Ks Ratio 0.12618 (Ka = 0.004, Ks = 0.0319)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 1392 bp    Location:867604..850922   Strand:-
>bmy_08233
ATGAAGTTATTCACATCGAACTCATTTGATGTGATCAGTGATGATGCTTTTATTGGTCTCCCACATCTAGAGTATTTATTCATAGAAAACAACAACATCAAGTCCATTTCAAGACATACTTTCCGGGGACTAAAGTCTTTAATCCACCTGAGCCTTGCAAACAACAACCTCCAGACTCTCCCAAAAGACATTTTCAAAGGCCTGGATTCTTTAACAAATGTGGACCTGAGAGGTAATTCATTTAACTGTGACTGTAAACTGAAGTGGCTGGTGGAATGGCTAGGCCACACCAATGCAACTGTCGAAGACATCTACTGTGAAGGCCCTCCAGAATACAAGAAGCGCAAAATCAATAGTCTCTCCTCCAAGGATTTTGATTGCATCATTACAGAGTTTGCAAAGTCTCAAGACCTGCCTTTTCAATCACTGTCCATAGACACGTTTTCTTATATGAACGATGAGTATGTAGTCATCGCTCAGCCTTTCACTGGAAAGTGCATTTTCCTTGAATGGGACCATGTAGAAAAGACCTTCCGGAATTATGACAACATTACAGGCACGTCCACTGTAGTGTGCAAGCCTATAGTCATTGAAACTCAGCTCTATGTTATTGTGGCCCAGCTGTTCGGCGGCTCTCACATCTATAAGAGAGACAGTTTTGCAAATAAATTCATAAAAATCCAGGATATTGAAATTCTCAAAATCCGAAAACCCAATGACATTGAAACATTCAAGATTGAAAACAACTGGTACTTTGTTGTTGCTGACAGTTCAAAAGCTGGTTTTACTACCATTTATAAATGGAACGGAAATGGATTCTACTCCCATCAATCTTTACATGCGTGGTACAGGGATACTGACGTGGAATATCTAGAAATAGCCAGAACACCTCAGACACTCAGAACGCCTCATTTAATCCTGTCCAGTAGTTCCCAGCGTCCTGTAATTTATCAGTGGAACAAAGCAATACAATTATTTGCTAACCAAACTGACATCCCTAACATGGAAGATGTATATGCCGTTAAGCACTTCTCAGTGAAAGGTGACGTGTACATTTGCTTGACAAGATTCATTGGTGATTCCAAAGTAATGAAATGGGGAGGCTCTTCATTTCAGGATATTCAGAGGATGCCATCGCGAGGATCCATGGTGTTCCAGCCTCTTCAGATAAATAACTATCAATACGCAATTCTTGGAAGTGATTATTCCTTTACTCAAGTGTATAMCTGGGATGCAGAGAAAGCCAAATTTGTAAAATTTCAGGAATTGAATGTTCAGGCACCAAGATCATTCACGCATGTGTCCATTAATAAGCGTAATTTTCTTTTTGCTTCCAGTTTTAAGGGAAACACACAGATTTACAAACATGTCATAGTTGACTTAAGCGCATGA

Related Sequences

bmy_08233T0 Protein

Length: 464 aa     
>bmy_08233T0
MKLFTSNSFDVISDDAFIGLPHLEYLFIENNNIKSISRHTFRGLKSLIHLSLANNNLQTLPKDIFKGLDSLTNVDLRGNSFNCDCKLKWLVEWLGHTNATVEDIYCEGPPEYKKRKINSLSSKDFDCIITEFAKSQDLPFQSLSIDTFSYMNDEYVVIAQPFTGKCIFLEWDHVEKTFRNYDNITGTSTVVCKPIVIETQLYVIVAQLFGGSHIYKRDSFANKFIKIQDIEILKIRKPNDIETFKIENNWYFVVADSSKAGFTTIYKWNGNGFYSHQSLHAWYRDTDVEYLEIARTPQTLRTPHLILSSSSQRPVIYQWNKAIQLFANQTDIPNMEDVYAVKHFSVKGDVYICLTRFIGDSKVMKWGGSSFQDIQRMPSRGSMVFQPLQINNYQYAILGSDYSFTQVYXWDAEKAKFVKFQELNVQAPRSFTHVSINKRNFLFASSFKGNTQIYKHVIVDLSA*