Part of scaffold_355 (Scaffold)

For more information consult the page for scaffold_355 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

SELPLG ENSTTRG00000004046 (Bottlenosed dolphin)

Gene Details

selectin P ligand

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000003804, Bottlenosed dolphin)

Protein Percentage 72.64%
cDNA percentage 74.5%
Ka/Ks Ratio 0.64054 (Ka = 0.0328, Ks = 0.0513)

SELPLG ENSBTAG00000031851 (Cow)

Gene Details

P-selectin glycoprotein ligand 1 precursor

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000029577, Cow)

Protein Percentage 68.54%
cDNA percentage 79.97%
Ka/Ks Ratio 0.81881 (Ka = 0.2341, Ks = 0.2859)

SELPLG  (Minke Whale)

Gene Details

selectin P ligand

External Links

Gene match (Identifier: BACU018833, Minke Whale)

Protein Percentage 96.28%
cDNA percentage 97.91%
Ka/Ks Ratio 0.56378 (Ka = 0.0169, Ks = 0.03)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 1413 bp    Location:174033..172621   Strand:-
>bmy_08267
ATGTTTCTGAAACTCCTACTGCTCCTGGCCCTGCTGGGCCCTGGCAGCAGCCTCCAGCTGTGGGAGACCTGGGAGGATGCAGCCGAGGAGGCCCCAGGCCCCCTGCTTGTCCGTGGCCGGAGAGAAGTGGATGAGGACGACTCCGACATATATGACTATGACATACAGACGGACCCTCCAGAAATGCTTAACTATAGCACCGAGGCCCCCAAGCTTCTGCCTGTGAAGGGACCATTGGAGCAGAGAGAGTCGGCAGGGCCTTTAACACCTGAGCCAACCACTCTGGAGGTGGCCACAAGGGACCCTGCTGTCCTGGATGCCGGAGGGGCAGCCACTGGGAATCTGAGCATGGAACTGGTCATACTGGTCACTCTGACCAAAGAACCAGTCACTGTAATCCCTCCCATCATGGAGGATCCATCCACAGAATCAGCTGCAGTGGAGGCCCTGTCCACAGGGCCAGCAGGCAGAATGGCACTGGCCACAGAGCCTGCAGCCACAGAGGCTCTGTCCACAGAGACCCTGCCCACGGAGCCAGCAAGCACAATGGCACCGGCCACAGAACGCACAGCCAGGGAGGCCCTGTCCACAGGGGCCATGTCCACAGAATCCACTGCCATGGGGGCCCTGTCCACGGAGGCCCTGTCCACAGAATCCACTGCCACAGAGGCCCTGTCCACAGAATCCACTGCCACGGAGGCCCTGTCCACAGAACCGACGGCCACGGAGACCGTGTCCCCAGAGTCCCTGACCACAGAATCCACTGCCACAGAGGCCCTGTCCACAGAATCCACTGCCACAGAGGCCCTGTTCATGGAACCCACAGTCACAGAGGTTCTGTCCACGGAACTGGCCACCACAGCAGTTCTTTCCATGGAGCCCACTACCACAGGGGCCCTGCCCACAGATCCAGCCACTGTGAAGACCCTGCCCACAAGACCTGCTACCACAAGGGGCCTAACCACAGCCCTTCCTGTGCCCTCTGATCCTCCCAAGAGCACCATTGTGGCAGTTGGCAATTCATCTGATGACTTGATCTACAAATGGAAAAATGGTCAGAGTCTTTTCCCCCRGAGCTCCGTGGCCCCAAGCCCCACAGAGGGCCTGCTTGACCCCAGCTCAGTGAAGCAGTGTCTGCTGGCCATCCTCATCCTGGCCCTGGTGGCCACCATCTTCCTCGTATGCACCGTGGTGCTGGCCATCCGCCTGTCCCGCAAGAACCACCTGTACCCCGTGCGCAATTACTCCCCCACTGAGATGGTCTGCATCTCGTCCCTGCTGCCCGATGGGGGTGAGGGGCCAGCTGCCATGGCCAATGGGCGCCTGCCCAAGGCCAAGAGCCAGGGCCTGAAGGCGGGGCCTGGGGAGGACCGCGAGGGGGATGACCTCACCCTGCACAGCTTCCTCCCTTAG

Related Sequences

bmy_08267T0 Protein

Length: 471 aa      View alignments
>bmy_08267T0
MFLKLLLLLALLGPGSSLQLWETWEDAAEEAPGPLLVRGRREVDEDDSDIYDYDIQTDPPEMLNYSTEAPKLLPVKGPLEQRESAGPLTPEPTTLEVATRDPAVLDAGGAATGNLSMELVILVTLTKEPVTVIPPIMEDPSTESAAVEALSTGPAGRMALATEPAATEALSTETLPTEPASTMAPATERTAREALSTGAMSTESTAMGALSTEALSTESTATEALSTESTATEALSTEPTATETVSPESLTTESTATEALSTESTATEALFMEPTVTEVLSTELATTAVLSMEPTTTGALPTDPATVKTLPTRPATTRGLTTALPVPSDPPKSTIVAVGNSSDDLIYKWKNGQSLFPXSSVAPSPTEGLLDPSSVKQCLLAILILALVATIFLVCTVVLAIRLSRKNHLYPVRNYSPTEMVCISSLLPDGGEGPAAMANGRLPKAKSQGLKAGPGEDREGDDLTLHSFLP*