Part of scaffold_355 (Scaffold)

For more information consult the page for scaffold_355 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

SSH1 ENSTTRG00000004059 (Bottlenosed dolphin)

Gene Details

slingshot protein phosphatase 1

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000003826, Bottlenosed dolphin)

Protein Percentage 82.71%
cDNA percentage 84.32%
Ka/Ks Ratio 0.41163 (Ka = 0.0277, Ks = 0.0674)

SSH1 ENSBTAG00000018825 (Cow)

Gene Details

Uncharacterized protein

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000025062, Cow)

Protein Percentage 89.66%
cDNA percentage 90.73%
Ka/Ks Ratio 0.18043 (Ka = 0.054, Ks = 0.2992)

SSH1  (Minke Whale)

Gene Details

slingshot protein phosphatase 1

External Links

Gene match (Identifier: BACU008374, Minke Whale)

Protein Percentage 97.89%
cDNA percentage 98.29%
Ka/Ks Ratio 0.30196 (Ka = 0.0117, Ks = 0.0387)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 3048 bp    Location:341310..311486   Strand:-
>bmy_08269
ATGGATGCTAAAGAGCTTTTTGTCTCCCGTGGCTTAAGTGAGAGTTTTTTCATGGTGAAAGGAGCAGCCCTCTTCTTACAACAGGGAAGCAGCCCTCAAGGCCAGCGGAGTCTTCAGCATCCCCACAAGCATGCAGGGGACCTGCCTCAACATCTTCAAGTAATGATCAACCTTCTGCGTTGTGAAGATAGAATCAAGCTGGCCGTGCGCTTGGAAAGCGCCTGGGCTGAGCGGGCCCGCTACATGGTGGTGGTGGACAGCAGCGGGCGCCAGGACACGGAGGAGAGTATCCTGCTGGGAGTCGACTTTTCCAGTAAGGAAAGTAAAAGCTGTACCATTGGGATGGTTCTCCGACTGTGGAGCGACACAAAAATCCACCTTGACGGAGACGGTGGATTCAGCGTCAGCACGGCAGGAAGGATGCACATCTTCAAGCCCGTGTCTGTCCAGGCCATGTGGTCTGCCCTGCAGGTCCTCCACAAGGCCTGCGAGGTGGCACGCAGGCACAACTACTTCCCCGGGGGCGTGGCGCTGCTCTGGGCCTCCTACTACGAGAGCTGCATTGGCTCCGAGCAGAGCTGCATCAACGAGTGGAACGCCATGCAGGACCTGGAGTCCACGAGGCCCGACTCCCCCGCCCTGTTCGCGGACAAGCCAACCGAAGGGGAGAGGACTGAGCGTCTCATCAAAGCCAAACTCCGGAGCATCATGATGAGTCAGGACCTGGAGAACGTGACGTCCAAGGAAATCCGTAATGAATTAGAGAAACAGATGAACTGTAACTTGAAAGAATTCAAGGAATTCATCGACAACGAGATGCTCCTTATCTTGGGACAGATGGACAAGCCCTCCCTCATCTTCGACCATCTTTATCTCGGCTCTGAATGGAATGCATCCAATCTGGAGGAACTGCAGGGCTCAGGTGTTGACTACATTTTAAACGTCACTAGAGAAATAGATAATTTTTTCCCTGGATTATTTGCGTATCATAACATCCGAGTCTATGATGAAGAGACCACAGACCTCCTCGCCCACTGGAACGAGGCGTACCATTTTATAAACAAAGCAAAGAGGAACCACTCCAAGTGCCTGGTACATTGCAAAATGGGCGTCAGTCGCTCTGCTTCCACGGTCATAGCCTACGCGATGAAGGAATTTGGCTGGCCCCTGGAGAAAGCCTACAACTACGTGAAGCAAAAACGCAGCATCACACGCCCCAACGCGGGCTTTATGAGGCAGCTGTCTGAGTATGAAGGCATCTTGGACGCCAGCAAACAACGGCACAACAAGCTGTGGCGCCAGCAGCCTGTGGATGACCCGGCGGGGCCTGGGGACTTCCTGCCGGAGACCCTGGACGGCACCCCGGAAGCCCAGCCGCCCTGCCTGGACGCCGCTGCCCAGCCTGCGTTCCCGGGCAGTGGGGCCCCGGGGGTACCCGCTCTCCCCTGCTGTCTCCGGCGACTCTCAGACCCCCTGTTGCACTGCCCCAGAGACGAGACGGGCGGCTGGGTCCACTTGGAGGATCTGGAGAGGGATGCTCTGCTGGAAGAAGCCGCTCAGCCGGCAGAGGCATCCAAGCCGGCCGCACACCCCCCAGAAGGTCCTGGACTCTGTGAGAAGGAAGTGAGGAAGAAACTAGAGTTTGGGAGCCCTCAAGCCCGGGGTGGCTCGTCGCCGCAGGTGGAGGAGATGGAAAGGGAGGAGGCCCCGGGAGCAGGGAAGTGGGGGCAGCCCGTAACCCAGATCGATAACCTGCTCAACTGGGAAAACCTAAATAACAACAACAGCAAGAGGAGCTGCCCGGACGACTTCGAGCATGATGCGATCTTTGGGATCCTTAACAAAGTGAAGCCTTCCTACAAGTCCTGCGCCGACTGCATGTACCCTGCAGCCAGCGGGATTCCCGAGGCCTTCGGGGAGCGATGCAAGAACCCCAGTGCTCCCGCCATCTGCACCCAGCCCACCTTTCTGCCCCACCTCACGTCTTCCCCCATGGCCCATGTGGCCAGCAGGTCCCGAGCTTCGGAGAAACTGTCCTCTGGCCCAACCGAAACTCCCCCATTCCTACCACCAGCAGGCTCAAGGAGGCCAGACATCAGTGGCCCTGGGGCCGGGGCTGCCCCAGAGCTACCAGCCAGCCTTTTGGACTCTTTGGAGTCCAGAGAGACTCACAAAGTCCTACCAAAGTCCCTCCTTTTGAAGAACTCTCACTGTGATAAGAACGCTCCCAACCTGGAAGTAGCGAAGGACGACTCRCCACCCAAGAAAGATCCGAAGCCAGCCAAGGACCTGCGGCTCCTGTTCAGTAAAGAAGCCGAGAAACCGACAGCCAACAGCTACTTGATGCAGCACCAGGAATCCATCATCCAGCTGCAGAAGGCGGGCTTGGTCCGCAAGCACACCAAAGAACTAGAAAGGCTGAAGGGCACGCCGGCCGACCCGGCGGCCCCCTGCAAGGACGGCCCCGCCAGCAGGCTGGAGGCCAGCATCCCCGAGGAGAACCAGGACCCGGCTCTGCCTGGCCAAGCCCAGGGCGACGAGAAGCCCGAGGCTGGCCCCCCTCCGTCAGAAGGAGCCCCACTGAAGAGCCCCCCGCTCTTCCTCTGCCGCCCAGACCACACCAGTCACTTCTCAAAAGACTTCCTGAAGACCATCTGCTACACCCCGACCTCATCCTCCATGAGCTCCAACCTGACCCGGAGCTCAAGCAGCGACAGCATCCACAGCGTCCGCGGGAAGCCCGGGCTGGTGAAGCAGCGCACGCAGGAGATCGAGACCCGGCTCCGGCTGGCGGGCCTCACGGTCTCGTCCCCGCTCAAGCGCTCTCACTCCCTCGCCAAGCTCGGGAGCCTCAACCTCTCGACGGAGGACCTGTCCAGTGAGGCCGACGTGTCCACCGTGGCTGACTCCCAGGATGCCAGGGTGAGCGAGTCTTCCTTCTTGCATGAGCCCCCAGTGGCCCCCAGGAACCCAGCTGCAACCTCTAAACCATCAGGGAAATCTGCCCCGGAAAACTTGAAAAGCCCTTCGTGGATGAGCAAAAGCTGA

Related Sequences

bmy_08269T0 Protein

Length: 1016 aa      View alignments
>bmy_08269T0
MDAKELFVSRGLSESFFMVKGAALFLQQGSSPQGQRSLQHPHKHAGDLPQHLQVMINLLRCEDRIKLAVRLESAWAERARYMVVVDSSGRQDTEESILLGVDFSSKESKSCTIGMVLRLWSDTKIHLDGDGGFSVSTAGRMHIFKPVSVQAMWSALQVLHKACEVARRHNYFPGGVALLWASYYESCIGSEQSCINEWNAMQDLESTRPDSPALFADKPTEGERTERLIKAKLRSIMMSQDLENVTSKEIRNELEKQMNCNLKEFKEFIDNEMLLILGQMDKPSLIFDHLYLGSEWNASNLEELQGSGVDYILNVTREIDNFFPGLFAYHNIRVYDEETTDLLAHWNEAYHFINKAKRNHSKCLVHCKMGVSRSASTVIAYAMKEFGWPLEKAYNYVKQKRSITRPNAGFMRQLSEYEGILDASKQRHNKLWRQQPVDDPAGPGDFLPETLDGTPEAQPPCLDAAAQPAFPGSGAPGVPALPCCLRRLSDPLLHCPRDETGGWVHLEDLERDALLEEAAQPAEASKPAAHPPEGPGLCEKEVRKKLEFGSPQARGGSSPQVEEMEREEAPGAGKWGQPVTQIDNLLNWENLNNNNSKRSCPDDFEHDAIFGILNKVKPSYKSCADCMYPAASGIPEAFGERCKNPSAPAICTQPTFLPHLTSSPMAHVASRSRASEKLSSGPTETPPFLPPAGSRRPDISGPGAGAAPELPASLLDSLESRETHKVLPKSLLLKNSHCDKNAPNLEVAKDDSPPKKDPKPAKDLRLLFSKEAEKPTANSYLMQHQESIIQLQKAGLVRKHTKELERLKGTPADPAAPCKDGPASRLEASIPEENQDPALPGQAQGDEKPEAGPPPSEGAPLKSPPLFLCRPDHTSHFSKDFLKTICYTPTSSSMSSNLTRSSSSDSIHSVRGKPGLVKQRTQEIETRLRLAGLTVSSPLKRSHSLAKLGSLNLSTEDLSSEADVSTVADSQDARVSESSFLHEPPVAPRNPAATSKPSGKSAPENLKSPSWMSKS*