Part of scaffold_355 (Scaffold)

For more information consult the page for scaffold_355 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

USP30 ENSTTRG00000008079 (Bottlenosed dolphin)

Gene Details

ubiquitin specific peptidase 30

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000007655, Bottlenosed dolphin)

Protein Percentage 95.71%
cDNA percentage 97.41%
Ka/Ks Ratio 0.5122 (Ka = 0.0214, Ks = 0.0417)

USP30 ENSBTAG00000019845 (Cow)

Gene Details

ubiquitin carboxyl-terminal hydrolase 30

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000029563, Cow)

Protein Percentage 93.67%
cDNA percentage 92.24%
Ka/Ks Ratio 0.12563 (Ka = 0.034, Ks = 0.2704)

USP30  (Minke Whale)

Gene Details

ubiquitin specific peptidase 30

External Links

Gene match (Identifier: BACU008376, Minke Whale)

Protein Percentage 87.83%
cDNA percentage 90.06%
Ka/Ks Ratio 0.57847 (Ka = 0.0942, Ks = 0.1629)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 1473 bp    Location:494296..519430   Strand:+
>bmy_08275
ATGCTGAGCTCCCGGGCTGAGGCGGCGATGACCGCGGCCGACAGAGCCCTCCAGCGCTTCCTGCGGACCGGGGCGGCCGTCAGATATAAAGTCATGAAGAACTGGGGTGTTATAGGTGGAATTGCCGCTGCGCTAGCAGCAGGAATATATGTTATTTGGGGTCCCATTACAGAAAGAAAGAAGCGTAGAAAAGGGCTTGTGCCTGGCCTTGTCAACTTGGGGAACACCTGCTTCATGAACTCCCTGCTGCAAGGCCTGTCTGCCTGCCCCACCTTCATCAAGTGGCTGGAAGAGTTCACCACCCAGTACACCAGGGATCGGAAGGAGTGCCCTCAACACCAGTACTTGTCCTTGACACTGTTGCACCTCTTGAAAGCTTTATCCTGCCAAGAAGTCACTGATGAAGAGGTCTTGGATGCAAGCTGCTTGTTGGACGTCTTAAGAATGTACAGATGGCAGATCTCTTCGTTTGAAGAGCAGGACGCTCATGAGTTATTCCATGTCATTACCTCGTCTTTGGAGGATGAGCGGGACCACCAGCCCCGGGTCACACATCTGTTTGATGTGCATTCCCTAGAGCAGCAGTCAGAAGTGACTCCCAGACAGATCACCTGCCGCACCAGAGGGTCACCTCATCCCACATCCAACCACTGGAAGTCCCAGCATCCTTTTCATGGAAGACTTACTAGTAACATGGTCTGCAAACACTGTGAGCACCGGAGTCCCGTTCGATTTGATACCTTCGATAGCCTTTCACTAAGTATTCCAGCTGCCACATGGGGTCATCCACTGACCCTGGACCACTGCCTTCACCACTTCATCTCGTCGGAATCCGTGCGGGATGTCGTATGTGACAACTGTACGAAGCTCCCCCAGTGTCTGTGCATCCACCTCCAGCGGCTGAGCTGGTCCAGCCACGGCACACCCCTGAAGCGGCACGAGCACGTGCAGTTCAACGAGTTCCTGATGATGGACATCTACAAGTATCACCTCCTCGGACACAAACCCGGTCACCGCAGCCCCGAGCTGCACGAGAAGGCAGGGCCTGCGTTGGAGCTGCAGGATGGGCCGGCAGCCCCCAAGCCAGTTCGGAATCCCCCGGGGGGCACCAAAACACAGATTTTCATGAATGGCGCCTGCTCCCCGTCTTTCTTGCCCACGCTGCCAACCCCGATGCCCTTCCCCCTCCCAGCTGTTCCTGACTACAGCGCCTCCGCGTACCTCTTCCAGCTGGTGGCAGTTGTCGTCCACCACGGAGACATGCACTCGGGACACTTCGTGACCTACCGACGGTCCCCGCCTTCGGCCAAGAACCCTCTCTCCACCAGCAACCAGTGGCTGTGGATTTCTGACGACACCGTCCGCAAGGCCAGCCTGCAGGAGGTGCTGTCCTCCAGCGCCTACCTGCTGTTTTACGAGCGTGTTCTTTCCAAGATGCAGCACCAGAGTCAGGAGCGCAAGTCTGAAGAATGA

Related Sequences

bmy_08275T0 Protein

Length: 491 aa      View alignments
>bmy_08275T0
MLSSRAEAAMTAADRALQRFLRTGAAVRYKVMKNWGVIGGIAAALAAGIYVIWGPITERKKRRKGLVPGLVNLGNTCFMNSLLQGLSACPTFIKWLEEFTTQYTRDRKECPQHQYLSLTLLHLLKALSCQEVTDEEVLDASCLLDVLRMYRWQISSFEEQDAHELFHVITSSLEDERDHQPRVTHLFDVHSLEQQSEVTPRQITCRTRGSPHPTSNHWKSQHPFHGRLTSNMVCKHCEHRSPVRFDTFDSLSLSIPAATWGHPLTLDHCLHHFISSESVRDVVCDNCTKLPQCLCIHLQRLSWSSHGTPLKRHEHVQFNEFLMMDIYKYHLLGHKPGHRSPELHEKAGPALELQDGPAAPKPVRNPPGGTKTQIFMNGACSPSFLPTLPTPMPFPLPAVPDYSASAYLFQLVAVVVHHGDMHSGHFVTYRRSPPSAKNPLSTSNQWLWISDDTVRKASLQEVLSSSAYLLFYERVLSKMQHQSQERKSEE*